ac285d3edaa862946cda993bf05175f0 *DESCRIPTION
4c4d6386d9ff73540b8d84c517f74ebd *LICENSE
b503743218b0d352e6674f35a3b1b56b *NAMESPACE
f80cf67dbf65e73e745c63966bf5087a *R/convert_bam_to_rle.R
eb63d08b3f94c72a5ad822f5b16ca7e6 *R/convert_rle_to_df.R
5f751dcb1a18a68a6a60f30fb87f1e22 *R/create_high_nucleotide_content.R
03ba24c8eeff50117dd1f191a446765d *R/create_mappability_profile.R
de6ceac294a3095fdd2f71c01c8200cf *R/data.R
878800bf3a36f580418bfb959e24ff17 *R/globals.R
0722e23bdca2324e40927854bdcbd22a *R/plot_cov.R
df0c8e085f2f3e0558fbf0ee9755ce08 *R/predict_iimi.R
da1379fbb0a45e7904dd082d523ff6ee *R/train_iimi.R
67b0d18898b03a20d3edc218c326af36 *build/vignette.rds
2afddbd88ed10903877440b8c2938523 *data/example_cov.rda
3e19697f772998b9752e3948221a07ce *data/example_diag.rda
2be59cf1dd1eb2d9bfc6cc0cb8242f31 *data/nucleotide_info.rda
edd20fc43301403724eeed6ced68a1f0 *data/trained_en.rda
620c608bdb44541a7c8bd23d5d5dddf1 *data/trained_rf.rda
f9ea01880c1bb94ff2a8561e4775dc49 *data/trained_xgb.rda
328e4587cdb9ff294fa208df9e32a148 *data/unreliable_regions.rda
8724f6c68a32167c4ea3f6ef797cbcaf *data/virus_segments.rda
738e31d42ad6aedf7938a5158b9a3540 *inst/REFERENCES/reference.bib
ab7696b45a71be491f8104fb24f40f72 *inst/doc/package_vignette.R
c7a2d43da0ab3342c709c7b580215bd0 *inst/doc/package_vignette.Rmd
3cd9a73de270c7c0650224e69f7508eb *inst/doc/package_vignette.html
49006af959fca68f504d6f0f0b81f0cf *man/convert_bam_to_rle.Rd
7386443c1db7a59380070c0c96f77cb9 *man/convert_rle_to_df.Rd
bb25afe29631989a4b588f534e0df667 *man/create_high_nucleotide_content.Rd
66c666ab24c1f22867e4e29df6b985af *man/create_mappability_profile.Rd
3cbc326573a5494035c8ab007157b931 *man/example_cov.Rd
30b425020d8a4a77de6d4414dae6f992 *man/example_diag.Rd
2ad612205fc86c641b24d08b4b813444 *man/nucleotide_info.Rd
fe54d2fe8854b220ad35187bf5444db4 *man/plot_cov.Rd
9bc02be12d96e81bc29199a9e9e90ca6 *man/predict_iimi.Rd
ada88efb1b4828d810cbae0fc82b58d0 *man/train_iimi.Rd
0be8cd3a3260b223ab502670af06c06c *man/trained_en.Rd
4ede1680511cd0053a6ee7da75fa5f3d *man/trained_rf.Rd
13bacffe81221245dfb4b67c89cf9edc *man/trained_xgb.Rd
180a22a3a82c8bbe0087f8cd4b6f895b *man/unreliable_regions.Rd
bbea30467d397619f9a945b411fe79d3 *man/virus_segments.Rd
c7a2d43da0ab3342c709c7b580215bd0 *vignettes/package_vignette.Rmd
