c7df9942c1b643aeaa073821721aa97e *DESCRIPTION
fe2c07ea54e8bca91c22127e1d42ee81 *LICENSE
3b0f7c82623762ec2f67de409afdfaf3 *NAMESPACE
4c610c1bdffd0175e432adebab031830 *NEWS.md
4a591abe6207b4ed9939f383f300380f *R/CorrelatorDocumentation.R
2efe7ce5b20314330da2f2a126b3fda1 *R/Emulator.R
84ea52db729004267fd20d8fbc2ccb0c *R/EmulatorDocumentation.R
f4fd4588d23cbd348fbba49b7672fdf7 *R/HierarchicalEmulatorDocumentation.R
5bef35acf69f15e8454dab264065c602 *R/ProtoEmulatorDocumentation.R
46e6e910b9a635e7a244f36e0b828c03 *R/Proto_emulator.R
90c0771b8dca48150e60e8e7200b4103 *R/VarianceEmulator.R
6e8b6dd9080b943b89040babbab57269 *R/correlations.R
669227016fd53425be7bb7572c5d7e72 *R/covariancehelpers.R
bdf8056e037cb2e1af16b74e0a4ce87e *R/data.R
143af1debf64741beaa37c528984c0cc *R/derivative_functions.R
320f2639e2bfecb5782c7711f4c96bda *R/diagnosticplots.R
6feb6ec6ba0d48a45cd1fd8a86bb8eb5 *R/diagnostics.R
f6fef41ec0170959cb0e5d685399cea3 *R/fullwave.R
0e36fbd89467d5d7b0b60f00b7048e3a *R/genpoints.R
d8f6a9b815cd372ce8049adf772a4314 *R/idemc.R
a7c43af81a0369430d399ea6be592a19 *R/implausibility.R
ff95a7d2cbe107b91145fc242b6b46ba *R/modelbuilding.R
53fded630371ac0ebd2c74dc6a2f6d9a *R/multiwaveplot.R
2aeb76f80351d420991974d240966f31 *R/plotting.R
e97fa1749bea44e286477e2c0e42c5a7 *R/sysdata.rda
2dae46a600dfe67127a743a84dd3699f *R/utils.R
1b1c202ae379c520b295cabe34755b40 *README.md
e7083a644dc33a167f8d9846314742c8 *build/vignette.rds
6df6f4282679d0a0468bd17b60636fbb *data/BirthDeath.rda
2dad09ab631a4ac8894210fe02944081 *data/SIREmulators.rda
98e146d0684150f46215bde32c4deda9 *data/SIRImplausibility.rda
96b40720baa015ac007ac1348bdf80bc *data/SIRMultiWaveData.rda
7f6d981babadf6589ef51d4e4007d6d4 *data/SIRMultiWaveEmulators.rda
e6c356df6fe797ad051c7114866cb326 *data/SIRSample.rda
820d3cb1f96c024b40d52d6c518887f5 *data/bimodalData.rda
71f612bc910247232a3b255c3e34405b *data/problemData.rda
1f67996975bd76d52aaf8b75b5dbadce *inst/doc/demonstrating-the-hmer-package.Rmd
8d2c5d3dac68073892146078bc96db68 *inst/doc/demonstrating-the-hmer-package.html
b3ff8ac487cbf0d3118eb7736921006c *inst/doc/emulationhandbook.Rmd
2d16b7087c95f89a856683a2344a40dd *inst/doc/emulationhandbook.html
31ba06098b60ee730def0d4f2fd54189 *inst/doc/low-dimensional-examples.Rmd
574d9027592f6bdb72f34c387d5729a2 *inst/doc/low-dimensional-examples.html
32574cf3f162f535a5404970d19160ce *inst/doc/stochasticandbimodalemulation.Rmd
1b73767fcae16634abe64eb428e4ab9f *inst/doc/stochasticandbimodalemulation.html
21c5a85dc4606f80f3321d2eb92820ad *man/BirthDeath.Rd
a54e871b6f97f8780462cbed161e7730 *man/Correlator.Rd
d5c899e3a12d8ffb5b17ecb1f8f41783 *man/Emulator.Rd
688451fc9bbe0b010bcca1666bb0192c *man/HierarchicalEmulator.Rd
0c514d6ee8256e224edc5c0d3d4dd115 *man/Proto_emulator.Rd
c8d6c5a14a6ca1fbae99267172ff3beb *man/SIREmulators.Rd
2c1658afd5dcaf98179014cf010aeb74 *man/SIRImplausibility.Rd
1570a27b751e34d291eef71777f125f0 *man/SIRMultiWaveData.Rd
02a95744ad2866b89149d402b93469c8 *man/SIRMultiWaveEmulators.Rd
b016f3b7f4149eb41a0ffbed16fcf5b7 *man/SIRSample.Rd
75555f6254c82e96ae7b5136f0595446 *man/SIR_stochastic.Rd
ae8c123fb56c01957e267a4fd5a5af96 *man/analyze_diagnostic.Rd
6e459e300e5aa3a13b3929ae9446266e *man/behaviour_plot.Rd
b375ed4f25b37eda7af8c77625b9a420 *man/bimodal_emulator_from_data.Rd
24501f3c73ff751ebc01a73385c76341 *man/classification_diag.Rd
a9c00782f531e74a73ffaf43b45f259e *man/collect_emulators.Rd
ef8cfa2526fa140da7c571605159d5e4 *man/comparison_diag.Rd
3bc01aaf95e48bbd9bd45395ec58ea6e *man/diagnostic_pass.Rd
36c1d002431fc2d6853f4b3a714bf0d3 *man/diagnostic_wrap.Rd
55ded85ee09d17898310fab9b3e400eb *man/directional_deriv.Rd
9f7c74793c17a5c60e8f1d016aef6d94 *man/directional_proposal.Rd
7b94b9b839c94646e6f5e3eddc39a4e8 *man/effect_strength.Rd
33c185989461eab7902994b0fe481b58 *man/emulator_from_data.Rd
8641c238e0884c8ffae4165decabb70e *man/emulator_plot.Rd
9abef394b73c12cbf30fb9a00dcc96b2 *man/exp_sq.Rd
c410b6756ef3432a3720145b4d34a1c5 *man/figures/logo.png
dbe8db47eec9380e44fdb8987817ae6c *man/figures/logo.svg
b84d57951c0956edb4bfe738ea13ac25 *man/full_wave.Rd
4b012a982ce9957baa4875a9ac35483d *man/gamma_exp.Rd
bd2039fa87e1c4838476ef135097a14a *man/generate_new_design.Rd
a8ad7f82b8afe377a8a52d56c19ea05b *man/generate_new_runs.Rd
aed094dad02318e0aba93a1f01f3223c *man/get_diagnostic.Rd
223be8ac578aefc0de72b1d7881afd82 *man/hit_by_wave.Rd
73255fd986637ab3abee7cb9b9855ce6 *man/idemc.Rd
779732c15753a1fe52d64dc7ceafa70a *man/individual_errors.Rd
8004cd334c943bcfa9175ec8deefe7e7 *man/matern.Rd
242e80c342a561b88406919a9cd20b35 *man/nth_implausible.Rd
c3efb4cfec02a30d6e8c5e6c82839b2e *man/orn_uhl.Rd
28d80178d1cec6d00b27acdd3f090601 *man/output_plot.Rd
3d0adb71d9be2ff728e65f603b9c3801 *man/plot_actives.Rd
b8254f2542bbc8517d4cceb55f25a0a0 *man/plot_lattice.Rd
e9b9c4baf5e5c92a65f0ca0365b19b29 *man/plot_wrap.Rd
7bf43432cb967c2036bcec177389403c *man/problem_data.Rd
9ec79c477abb40b224a1f85ab1e9fee4 *man/rat_quad.Rd
f41e0a06851fb17c797d4644653e8634 *man/residual_diag.Rd
196c91cda4d6eb3f4d2ed00c9a1cf75d *man/simulator_plot.Rd
4429b1dab7edbea167747374140ef51f *man/space_removal.Rd
973933f39198686d8942c12dd97ee0d9 *man/space_removed.Rd
975adea8f5382a2faf5a5b710be5e68c *man/standard_errors.Rd
c1ed2ade632e70f24f232771832e5230 *man/subset_emulators.Rd
b89ca6195e7394343c4a9b7db638cc00 *man/summary_diag.Rd
6510f8e5652ca8e23e5c609cb4811255 *man/validation_diagnostics.Rd
f5bb5981615dd1bc8378f52e09f194f2 *man/validation_pairs.Rd
3c6d8d4a9ac551a4166d3495738c46e1 *man/variance_emulator_from_data.Rd
95ebe0fea7461d10e07beb33b693d348 *man/wave_dependencies.Rd
77e9cdb9525fc36ea0633fa3ae660c6f *man/wave_points.Rd
5f143b84ebfdc36613fdc269519ca6d2 *man/wave_values.Rd
90b58b096f0fa1fec4fed9c329c184d8 *tests/testthat.R
1f3c136c47b2d031602a0794105556f1 *tests/testthat/Rplots.pdf
a52d96180d341015c5fd11e3262ca39b *tests/testthat/test-cluster.R
66aa5a8a36803732adda97ce6b5293cc *tests/testthat/test-correlator.R
668f692d2561a0e17e91d172a1a18cd1 *tests/testthat/test-custom_functionality.R
825147edce801ed32d3c49aaeffa117e *tests/testthat/test-derivative_functions.R
649e26572dd93eae83ede846e6f90b60 *tests/testthat/test-em_building.R
884ee2642964d01b448cc69613286ee9 *tests/testthat/test-emulator.R
d6fbee06a2d79194e8bb24b7588e986c *tests/testthat/test-emulator_admin.R
74357ffd101e30f2b778b858bc986783 *tests/testthat/test-exp_sq.R
1905ed9056f018d44a31f7d38c14fa17 *tests/testthat/test-gamma_exp.R
1525c2d3ddc4157600162fbadc69830d *tests/testthat/test-get_dist.R
b37f587962561d9e012b8bef86b7b9a1 *tests/testthat/test-implausibility.R
02732044a9d37b9a2fe0bd5891be07dc *tests/testthat/test-kurtosis.R
1cacce562db3011d1cd28157c30fec86 *tests/testthat/test-matern.R
4c7d31c3e7b3a02f107f55169ef67f97 *tests/testthat/test-orn_uhl.R
8b5d1ecb5a6d71b04042fbc685ba25cc *tests/testthat/test-plotting.R
6e3842791f1a0dfb3063b3131273e041 *tests/testthat/test-point_gen.R
28e6ac43009c1158b473a7a91d25732d *tests/testthat/test-proto_em.R
1d7bfa1f337616aac599512b9bd17351 *tests/testthat/test-rat_quad.R
eecd0e71255a5fbdbc20f0b6066fab9e *tests/testthat/test-scale_eval.R
ebd3f965ecde947c5e3fbf9c6437cb77 *tests/testthat/test-validation_diag.R
6cdb2b33503233079e9886bdf0c3f2a9 *tests/testthat/test-variance_ems.R
b993f80ef377ff33d19f551f2897f790 *vignettes/demo-em-plot-1.png
a69e08236f93e11a029a8a9d1fe5f096 *vignettes/demo-em-plot-2.png
c4a76b3a4735672b917ffee0e8484a0e *vignettes/demo-em-plot-3.png
04158fdfbe8f81768b874a65254bc2fa *vignettes/demo-em-plot-4.png
d3fe65694ee777ac872c1a06f923d259 *vignettes/demo-em-plot-augment-1.png
b574f596fd74f44000df3a8dd3df2e78 *vignettes/demo-em-plot-imp-1.png
f24d4e6518e49b06b22bf21fcfd977d8 *vignettes/demo-em-plot-imp-2.png
dd73672ca784049aa3a29438916e913b *vignettes/demo-gen-new-runs-1.png
f878123084d779c2daf639b4f53831ec *vignettes/demo-lattice-plot-1.png
94fad7e48b4e57e3f7a5cf2906d216d0 *vignettes/demo-multi-wave-plots-1.png
7c18224ed166310cc9f0fe7b530e694e *vignettes/demo-multi-wave-plots-2.png
cad9054ef655c905cbc2b24a54dfcb44 *vignettes/demo-multi-wave-plots-3.png
ddbc222c0df155d868b5c31f63058b3d *vignettes/demo-plot-waves-1.png
132a652c0d4672d09bd1bd87d2be7610 *vignettes/demo-space-removed-1.png
74878a3f58f5d108b0c66ab074064e20 *vignettes/demo-validate-1.png
1f67996975bd76d52aaf8b75b5dbadce *vignettes/demonstrating-the-hmer-package.Rmd
2c573f12abec20100524a24a377f5fa2 *vignettes/demonstrating-the-hmer-package.Rmd.orig
b3ff8ac487cbf0d3118eb7736921006c *vignettes/emulationhandbook.Rmd
c08aa548b81ab742b08d9ca5c2727335 *vignettes/emulationhandbook.Rmd.orig
e03158aaf3726218b8a93bdb2b18123a *vignettes/handbook-bad-design-diagnostic-1.png
cec3321969a5fdab4bb6df4d8b37857a *vignettes/handbook-bad_design_generation-1.png
f376a0f9f3a07c607d41fc682f5d50a5 *vignettes/handbook-behaviour-plot-1.png
b0054461610d7e7ba6a27ce17f839222 *vignettes/handbook-behaviour-plot-2.png
38458a78fc19aaeab22c3c4c56275ca0 *vignettes/handbook-check-output-1.png
2a7edfc950789843520537ba34e80efd *vignettes/handbook-check-output-extra-1.png
b35c3cccf8f10872ebcb040957206ab5 *vignettes/handbook-dirac-delta-1.png
5504eb915500ba60fb911d782b706922 *vignettes/handbook-logit-example-1.png
75e007838edf9a8e410457e24a0b3064 *vignettes/handbook-output-active-1-1.png
54f298cca654bbbddedeca11e42a2983 *vignettes/handbook-output-active-1-2.png
d0f52eab8ac732d2f7a418484d981b25 *vignettes/handbook-output-active-2-1.png
9460dab7894d020ed0b418cd7532af3d *vignettes/handbook-output-active-2-2.png
a4d3e4d87f03d1de766c78eaaa5478c5 *vignettes/handbook-plot-active-1.png
257b878ea9dd4a10afb890ee7ef6dd56 *vignettes/handbook-problem-imp-1.png
2074d7c68d757edbb77e5be2bb4e797c *vignettes/handbook-transformed-imp-1.png
31ba06098b60ee730def0d4f2fd54189 *vignettes/low-dimensional-examples.Rmd
ca3c862585079dcf87f12bfaaf1a9c5e *vignettes/low-dimensional-examples.Rmd.orig
7d8fe6d11d7852667ea767a61de1e761 *vignettes/lowdim-changed-2d-validation-1.png
82b7ffd8135c220fe2903f26634441ed *vignettes/lowdim-gen-1d-points-2-1.png
0ec1411aac77f9f52ff3d578bdcd00e5 *vignettes/lowdim-gen-2d-points-2-1.png
bbc69c09df791035fc5943a106f4c85e *vignettes/lowdim-gen-2d-points-first-1.png
1a99f22d30f6b099bf6eeeb9de295adf *vignettes/lowdim-plot-1d-first-1.png
c64c5fc25b68f937c56ce6b37a9a9ab8 *vignettes/lowdim-plot-1d-results-first-1.png
d1bbc98d38e22bea841dd0defe95b55c *vignettes/lowdim-plot-2d-ems-1.png
2ead415e190f7905063353f5220d9d41 *vignettes/lowdim-plot-2d-ems-2.png
2e3e73481c7bfedb31a14b9e98d411ae *vignettes/lowdim-plot-2d-ems-corr-1.png
905c60582175084197fdd215035e9828 *vignettes/lowdim-plot-2d-ems-imp-1.png
f36013f78a42270a89be1c771b2ed5bf *vignettes/lowdim-plot-2d-ems-imp-2.png
3a8ea3371bbef239a8007b2318551931 *vignettes/lowdim-plot-2d-ems-with-augment-1.png
3d1fc359eea33a9d4d06b72128f5fb7a *vignettes/lowdim-plot-2d-imp-2-1.png
fef902cfef4e98059aaf9841a95122b6 *vignettes/lowdim-plot-2d-waves-1.png
5113a2502c45fff2758a1db6419aa7f8 *vignettes/lowdim-plot-2d-waves-2.png
67367a296d9bb3d9a92ec74d2f24b1fc *vignettes/lowdim-plot-2d-waves-3.png
119368a7244e1fc52dbc5c7e9d69ab21 *vignettes/lowdim-validate-2d-ems-1.png
c46aaab623c94188450b349c42032e22 *vignettes/lowdim-validate-2d-ems-2-1.png
062649fbf993ce37568ae39538bfa7c4 *vignettes/lowdim-wave-2-1d-1.png
8f643f3d537c4149b7e474f1ce9ddc28 *vignettes/precompile.R
2922b21766fa4d8a0d4e026dc3126276 *vignettes/stoch-bimodal-demo-1.png
4bd627e15e981011504c0f5a263cbc10 *vignettes/stoch-bimodal-imp-1.png
69c18c8ac48d7102bac43e7e37075ee0 *vignettes/stoch-bimodal-indiv-imp-1.png
89b77ce7503313ad5512b895191901f5 *vignettes/stoch-bimodal-indiv-imp-2.png
dca36b2c696ae8ba14984223e5906c5e *vignettes/stoch-birth-death-plot-1.png
bdb8d35672bb2055d29951a494157e0a *vignettes/stoch-multistate-demo-1.png
b916bb8c1206af9352ec09ec8f5193d2 *vignettes/stoch-multistate-imp-1.png
d88b7c56ad4537117b5be1bb018748f7 *vignettes/stoch-multistate-indiv-imp-1.png
d2e5909c5be90806da179c6af4e38983 *vignettes/stoch-multistate-indiv-imp-2.png
c99366ad33a75f3f3cdbd0214e69ae0b *vignettes/stoch-plot-bimodal-1.png
b2029b8ad658d76e80405ba452047966 *vignettes/stoch-plot-bimodal-2.png
cf92ca8e46efb37333558e92bc30ef03 *vignettes/stoch-plot-modes-1.png
f848bdd665c658146d975376d9852852 *vignettes/stoch-plot-modes-2.png
e44b5e33c5f6638d6036f527da325836 *vignettes/stoch-plot-multistate-1.png
ef22e3f11037cedf94bdb02d31edfb0e *vignettes/stoch-plot-multistate-2.png
f3d9c964963d9f46fc331f8bd18e6cc8 *vignettes/stoch-plot-stoch-ems-1.png
1922253eff23a0fa4643b682e613d8c3 *vignettes/stoch-plot-stoch-ems-2.png
81aca2d5e2fea0215032d5877068abdb *vignettes/stoch-plot-stoch-imp-1.png
9d0e8556005eeff96eeaacea3adf60c6 *vignettes/stoch-plot-stoch-var-1.png
512ded1904a35becbff0270c38617a6a *vignettes/stoch-propose-bimodal-1.png
42350688c52fa6aeaa387cbb5bea26c0 *vignettes/stoch-propose-multistate-1.png
234d9d38aac3d31a5af50db8647684f4 *vignettes/stoch-propose-var-em-1.png
48297cecca9ff20cb232167dbe440f5a *vignettes/stoch-validate-bimodal-1.png
fdfef145e8d4678577933d606e4715b5 *vignettes/stoch-validate-bimodal-2.png
0949c8792a84d05bfe900adabb5b64b9 *vignettes/stoch-validate-multistate-1.png
6641f4f8fc8c5f07b3ce85b910b3ffce *vignettes/stoch-validate-multistate-2.png
4d47a3e4e67e813d93614d13f9eba2d8 *vignettes/stoch-validate-stoch-em-1.png
54e7da3608ac336ba7d863918d04159a *vignettes/stoch-validate-stoch-em-2.png
e1986093f5b608c2fce38df3636d337d *vignettes/stoch-validate-stoch-em-3.png
8c1db7ddaa20828896cc8c5887e27d9e *vignettes/stoch-validate-var-em-1.png
32574cf3f162f535a5404970d19160ce *vignettes/stochasticandbimodalemulation.Rmd
f95611282746dcadd78d78864e3f82dd *vignettes/stochasticandbimodalemulation.Rmd.orig
