Encoding: UTF-8
Package: geneExpressionFromGEO
Title: Retrieves Gene Expression Dataset and Gene Symbols from GEO Code
Version: 0.6
Authors@R: person("Davide", "Chicco", email = "davidechicco@davidechicco.it", comment = c(ORCID = "0000-0001-9655-7142"),
                  role = c("aut", "cre"))
Description: A function that reads in the GEO code of a gene expression dataset, retrieves its data from GEO, (optional) retrieves the gene symbols of the dataset, and returns a simple dataframe table containing all the data. Platforms available: GPL11532, GPL23126, GPL6244, GPL80, GPL8300, GPL80, GPL96, GPL570, GPL571, GPL20115, GPL1293,  GPL6102, GPL6104, GPL6883, GPL6884, GPL13497, GPL14550, GPL17077, GPL6480. GEO: Gene Expression Omnibus. ID: identifier code. The GEO datasets are downloaded from the URL <https://ftp.ncbi.nlm.nih.gov/geo/series/>.
BugReports: https://stackoverflow.com/questions/tagged/geneExpressionFromGEO
Depends: R (>= 3.1.0)
License: GPL-3
URL: https://github.com/davidechicco/geneExpressionFromGEO
Imports: xml2, Biobase, annotate, GEOquery
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
RoxygenNote: 7.1.1
NeedsCompilation: no
Packaged: 2021-04-22 13:05:23 UTC; dave
Author: Davide Chicco [aut, cre] (<https://orcid.org/0000-0001-9655-7142>)
Maintainer: Davide Chicco <davidechicco@davidechicco.it>
Repository: CRAN
Date/Publication: 2021-04-24 11:40:06 UTC
