ecbca8c3a98520d224d20a71c08cc7a0 *DESCRIPTION
8a930fca46579840227a82b1ebf00a9d *LICENSE
762ca4c59f3cee439ac4746fb423a2e2 *NAMESPACE
c47acd0ed2be62b4381f7afb7f58815f *NEWS.md
afb0d2b977901ef0b9d007aa9a68103c *R/MphCalcLogL.R
8d415e2ddeae8ca0a584875c22b6c160 *R/MphEM.R
b7792b4793d6ab8324463c772e0104b0 *R/calc_XHiY.R
5688d85aab971162df74cf24b8ba6b67 *R/center_kinship.R
771432329692d879cb44366b8247aed5 *R/eigen2.R
9a11b4e9dd6861caa19a92cf6bd5cf52 *R/gemma2-package.r
f8489b9e92b358ebf9ec56a0a027abf1 *R/stagger_mats.R
e8c1138464f6766c4e9e682deded62ca *R/update_u.R
bb9bd4a9776b44eec0414c0d8c0f070e *README.md
71d2e7344fd3038ef079c30f9d92c9ab *build/vignette.rds
a08c9a02089b6b0d1ad0a0db2cd0d4cb *inst/doc/compare-with-GEMMAv096.R
1b4b37dca76632a949a1a6d91b7bb0d0 *inst/doc/compare-with-GEMMAv096.Rmd
a89935bc67d45e1e6568aac7927eaf39 *inst/doc/compare-with-GEMMAv096.html
d41d8cd98f00b204e9800998ecf8427e *inst/extdata/covariates
2b91d5267e129ca7cc878e2715a53ca7 *inst/extdata/demo6.txt
461bc921d7a79e73dfd36745ce7c3115 *inst/extdata/mouse100.cXX.txt
d678a92d08cfaa7e76acdef8dce0fd1d *inst/extdata/mouse100.geno.txt
fe99ca5097d67108439720f5714552dc *inst/extdata/mouse100.pheno.txt
b634299fa304978eaa067db4c3cc8897 *inst/extdata/mouse100_1snp.geno.txt
205360576c8a6bb565998b8b917e6a5c *inst/extdata/mouse100_CD8MCH_lmm_demo6_.assoc.txt
8b7b31055255c9d92b43cedfc2964c3b *inst/extdata/mouse100_CD8MCH_lmm_demo6_.log.txt
0d0d27aa39d0fdcc4bf659c688d9f62f *inst/extdata/mouse_hs1940.anno.txt
f0e3a2ee8a6d2d39ec9ab0505ea30016 *man/MphCalcLogL.Rd
d73e356629157303360300902a5b8ea9 *man/MphEM.Rd
acb150c4d5f015842cd268bda2cca6f6 *man/UpdateRL_B.Rd
41ec961e86299e8e43e51ec96856f3fb *man/calc_XHiY.Rd
a5a1b6e723e1e240c26cc7130673877f *man/calc_omega.Rd
274237d597ac96dc441873fb0e37a49b *man/calc_qi.Rd
1920a6e6c4f186ced138fbf8d378ada6 *man/calc_sigma.Rd
a38744ecd4a959f0a09a915d4783fae3 *man/center_kinship.Rd
7dbe1bd4b4258476e174990a56fdf1f8 *man/eigen2.Rd
95025dc9543ca0917063dffe52a95e37 *man/eigen_proc.Rd
df3e8b903e37000a4cfe0af4d5f0ad3a *man/gemma2.Rd
febdde8d7777cace546ebee837044bb7 *man/stagger_mats.Rd
77f103145ccd52f6e9f727ea3c59cfa2 *man/update_e.Rd
982ed43be96361cf00177030c3d72ea5 *man/update_u.Rd
f83f0a77630bea98861c1b2e625d5dae *man/update_v.Rd
4751b7e8e6e8d61a9bbcb7a332eff9d2 *tests/testthat.R
ac5d8fff47d586526bd9f4313948f0d6 *tests/testthat/test_MphEM.R
7efd73e1beebc6792d6b962ea4b7e94b *tests/testthat/test_calc_XHiY.R
07154a392b6142aa0a6e03bd4d30a1bf *tests/testthat/test_calc_qi.R
8e946d801112aecf47ada71bedca9498 *tests/testthat/test_calc_sigma.R
145f2ef7cd4d6b0546884fe287a4cab4 *tests/testthat/test_eigen_proc.R
8e2581e85d96578bbb76f6cc93777bd1 *tests/testthat/test_updateRL_B.R
90f3d5d9948404b901e13a899017ca82 *tests/testthat/test_updateU.R
1b4b37dca76632a949a1a6d91b7bb0d0 *vignettes/compare-with-GEMMAv096.Rmd
2bf85932915e1c426c6966152b921591 *vignettes/gemma.bib
