54748e3dfe774303d74280f156dc165b *DESCRIPTION
204b6ac0509beef9473e0cf5053d17a4 *NAMESPACE
31ff869a3f6dc95a57353e8640208047 *NEWS.md
ba93096728eb21182d4ab9dcb80fb7f9 *R/Gamma2delta.R
51cf92154269e7fc4284f8a785d8f595 *R/Gamma2gammasCon.R
95c323c8f1b54f5acf6f8a00f88f99af *R/Gamma2gammasUncon.R
ea10a15e3b67ca3ff44ca77ff15219a9 *R/RcppExports.R
8e9bb5b6b006a27638704ad2221ff181 *R/apply_viterbi.R
00cfd369bffa26aa0c2ee488b859168f *R/check_controls.R
ba58078bdd9900b2c7e00f97a371805f *R/check_decoding.R
4d280435396fa64161d84f3d06b7afb8 *R/check_estimation.R
1ce2a57e0c18cf466196f3a533757725 *R/check_saving.R
83a8cf9e3f83ecd18294e846438cbb9a *R/compute_ci.R
69ac8f6c0fecbaa0b088396c4345e567 *R/compute_fs.R
7a051c77fabcb9e210e5c71ae3b9bcb2 *R/create_visuals.R
fba3b8d42252786ab83f68cc298d9eea *R/dfCon2dfUncon.R
a16b2bd344119c8296506b4e6bb937b4 *R/dfUncon2dfCon.R
fa4765a26e19e9ed56d7194ecd328def *R/download_data.R
c3fab7503de1779b8d63897ab98222e2 *R/exception.R
6ede7bdb46b5a35d8d2303917c714a1d *R/fit_hmm.R
4c8ffa80af886cb0820a991dc9b69a33 *R/gammasCon2Gamma.R
bc42ccd4c89cc93f650f56426cf07665 *R/gammasCon2gammasUncon.R
44ec45ce379e605338bdb40bd174407b *R/gammasUncon2Gamma.R
e30ebe1d0186bc3631cf91629979aef7 *R/gammasUncon2gammasCon.R
32fe5ffa3cb74acc03c44bdb352defef *R/init_est.R
673aa7556c4bf18fdb01eb522bbaba76 *R/max_likelihood.R
b322774324edfbdeb2eeaa8c3bc2fa98 *R/muCon2muUncon.R
74f2145e4ee16d02a11e86fe61fc0ff3 *R/muUncon2muCon.R
684aa34e20643e1318bbf7d9e1e74d02 *R/nLL_hhmm.R
56701ff9a1ec53d3a65021fa1df2e346 *R/nLL_hmm.R
352cd057fde1fa19b37617237c57fd8b *R/parameter_names.R
c0604afd53fa821a0913d04f18a646ae *R/plot_ll.R
25a2b50bbad3c7b7da7b27e3998cde46 *R/plot_sdd.R
2810e6608bc7c8a3342df883d49cfe7c *R/plot_ts.R
b8bfe31c70d43d00c3ad68d8f581f507 *R/process_data.R
d9152b8320923bae6eee0bcc68d09594 *R/pseudo_residuals.R
0bc8419275188867013484354b51ba8b *R/read_data.R
383f58a52556df87c509761f68ca5af9 *R/sigmaCon2sigmaUncon.R
e5801a0318037abacd9514bd9a43d96e *R/sigmaUncon2sigmaCon.R
587c20ab834273985ab61478575b53b7 *R/simulate_data.R
763f486049848e0914af6719113a5837 *R/thetaCon2thetaList.R
8c7bc604a470077da6910979b67eae74 *R/thetaCon2thetaUncon.R
b6305344e511f1fc61fd3a18f319b9be *R/thetaList2thetaCon.R
ecd7dcca36790f8fe89b453711033df4 *R/thetaList2thetaListOrdered.R
efad421f8b2a6e63a11179266b99b24d *R/thetaList2thetaUncon.R
02127fd06b7f20249473b8c742e9f943 *R/thetaUncon2thetaCon.R
5426697cf86ea89172764af30e90fa42 *R/thetaUncon2thetaList.R
6153c78d720352ab2906319c09f1a9de *R/thetaUncon2thetaUnconSplit.R
5554cb58c671a018eface265a61a29fd *R/thetaUnconSplit2thetaList.R
cee1baa0822c2e261f7a9672c2409e36 *README.md
c5307d90fef8c847e92d67f817a65c01 *man/Gamma2delta.Rd
b52850be83fa39274431da1490a3d55b *man/Gamma2gammasCon.Rd
004bceee4d01ef840b5bfa0824ab7629 *man/Gamma2gammasUncon.Rd
2bace943791e30280b0e6859532e323e *man/apply_viterbi.Rd
2fbcd7044db8cc19f069b224cf5e3087 *man/check_controls.Rd
9c3f690bb4f815c8f5b9c897b234a1db *man/check_decoding.Rd
c0d609644aa7ac4445c1f388936c8af4 *man/check_estimation.Rd
7f2eee6eae194e4214d25b99b0f25ad9 *man/check_saving.Rd
f4bb981efd3bca029dab88887cad26ed *man/compute_ci.Rd
8cac3d522b09342b05c4ec8d51f26314 *man/compute_fs.Rd
81bcb0ef83d9e9063726a0366b89f312 *man/create_visuals.Rd
880094e4e4c8656e3a97eb05748dcd56 *man/dfCon2dfUncon.Rd
31ded45035f9ed1a174e8ed02a09286a *man/dfUncon2dfCon.Rd
bde764dee9fcd0350adfdb47887da2ad *man/download_data.Rd
27e52e2da1be43aa0f52db6360cb4e6b *man/exception.Rd
b5f37d8d79365ce2da1faea06e376541 *man/fit_hmm.Rd
0423051ebd71010267e668b83e81ac3d *man/gammasCon2Gamma.Rd
8d2f0244bf9cfa8aa823e0f996aa053b *man/gammasCon2gammasUncon.Rd
abe06b94f8aeb6c673abc787a36bdbc5 *man/gammasUncon2Gamma.Rd
fe420160be5f7f6d0746438d661724eb *man/gammasUncon2gammasCon.Rd
af9f2ec97b76b925c825c0208e59c640 *man/init_est.Rd
44aa5d910050c5ab93832404d680eaf5 *man/max_likelihood.Rd
3eaf827e7398119a84ec68723628e871 *man/muCon2muUncon.Rd
f2518a2d61001019450dced41151abd7 *man/muUncon2muCon.Rd
a02f9763521d1df921cd9bcb71b77ab2 *man/nLL_hhmm.Rd
63130acbf6085b4430c2334e841b1d31 *man/nLL_hmm.Rd
69f6f6d586d10bb24d20991a07761cec *man/parameter_names.Rd
4b0e234f6d8ff4a4cf26b51b427c8a8b *man/plot_ll.Rd
6d3822ae1452e38323cac1f3b7dca02f *man/plot_sdd.Rd
5f6cf90e1d6214198963547850493188 *man/plot_ts.Rd
3b9781b1e944ddb028238d3fe0ba6f3a *man/process_data.Rd
5b7abb8f305f0fe48b4357108d9c6d07 *man/pseudo_residuals.Rd
4bec4371894dfeaaba13bc13520bf8e3 *man/read_data.Rd
1b214b4fb91aa1c56a2adc462cf9356e *man/sigmaCon2sigmaUncon.Rd
b21e1b05a91c3ef6073535938b3ac61f *man/sigmaUncon2sigmaCon.Rd
3a588d8f54234b11ce56902457504e16 *man/simulate_data.Rd
1ad6d7c4a54d94bdd0bf12b9c433e59a *man/thetaCon2thetaList.Rd
a5181c1bd49783e11417650b61030372 *man/thetaCon2thetaUncon.Rd
48e3d58b9b402a793f4a7aedcd0331fa *man/thetaList2thetaCon.Rd
9fe695dfc4c603fbf0325856b7302afa *man/thetaList2thetaListOrdered.Rd
d07616bfb746e178fa1459165d7611c3 *man/thetaList2thetaUncon.Rd
9e257fd0b7fc85db11443cd64b1f9c21 *man/thetaUncon2thetaCon.Rd
838c2890da7cbf41601b8637c45b7b7b *man/thetaUncon2thetaList.Rd
8fa4dc8d46c96ed5c66ddbef3815ca4c *man/thetaUncon2thetaUnconSplit.Rd
b6e0d5a8cb3fcbad2a639cdb8210fb9d *man/thetaUnconSplit2thetaList.Rd
728c0882e68f112e48f817e4a302ecb7 *src/LL_HHMM_Rcpp.cpp
3a871b93c0891786245a2d915845dd7f *src/LL_HMM_Rcpp.cpp
952d3ed70834c15378f53040bf39fe9b *src/RcppExports.cpp
