9c60685dd5458b1cb57c55a4b0636be9 *DESCRIPTION
cc951a661ef212ab51b0caae75b7df66 *NAMESPACE
071954a56a63f655de7d743dd9cb1e5d *R/addColumn.R
3a189c94d535691b7c2ad2d31d538b0f *R/assignMutations.R
698ffd9afa389a8e73f98d5536e5fd83 *R/assignQuantityToMutation.R
79d8bc8809aa59e69d4f1613fb81231c *R/assignQuantityToSP.R
34fbfe9738a9c9fd636c6c6c222f5f6d *R/buildMultiSamplePhylo.R
b4c0fe749055420ec5493e0a854773ab *R/buildPhylo.R
7f08c502a1139db5a731bcbcce4c7484 *R/cellfrequency_pdf.R
19b9c0aa63ad14766544b4f146641518 *R/clusterCellFrequencies.R
e5b3395b1db5bbb37e8eb7db2326c2d5 *R/computeCellFrequencyDistributions.R
f7bf2d6192a657f1850cca805ddf220b *R/onLoad.R
f7e2b1a98cc5fc0e69c05fe636baeca7 *R/plotSPs.R
528af31bd68f9be2aaefcee4400bf255 *R/runExPANdS.R
ab9b341bfd4c3b08d33af8c497bc1261 *R/sysdata.rda
82132b0f9ff691dac132fbfff1766f49 *build/vignette.rds
664284e0624f9ce0762af69e78b0b03e *data/cbs.rda
6fb02c3ab0905057bf173dd43c1b8908 *data/snv.rda
b90153ece4e7efce3a1297d6fd1812a7 *inst/doc/expands.R
a6c359375ce9498d4c58e4412ddbf78c *inst/doc/expands.Rnw
ec274a2e99b939e46cb6b58e71b80993 *inst/doc/expands.pdf
330f0a7e42271bd0a8a3bd92684b29f9 *inst/java/expands.jar
31899e4139d67ae169ba214724e3799d *java/ExPANdS.java
eec20fd92a3d638f04c17cc311a5f0f1 *man/assignMutations.Rd
dc0a8a7a0aee2f71baf3ea7e5c574e1e *man/assignQuantityToMutation.Rd
94c6b718a067bf86054e2207a0ada1a7 *man/assignQuantityToSP.Rd
58a9d7aa7ecc398015184ff8cd7e9793 *man/buildMultiSamplePhylo.Rd
f4216ca71fa85532eb7b7a5bb29f20e2 *man/buildPhylo.Rd
182bfe9986fe62d975e0cdc4a8baf5f6 *man/cbs.Rd
1ba2fa97e7720d2b0f96d51b80021e4f *man/cellfrequency_pdf.Rd
0a737278c52b2ec26c7a0da8726c75bc *man/clusterCellFrequencies.Rd
c7e57b2765c349a7b6d9edb253d4ca2a *man/computeCellFrequencyDistributions.Rd
09afa35d271b6a279d745469107954ac *man/plotSPs.Rd
ab9bd8e9e4ddbfec15eb6ac4f81d9e33 *man/roi.Rd
634343a1d8fed9d07edb3c73c6039d30 *man/runExPANdS.Rd
91ec6f28bc7c20c6556134d9a81476ef *man/snv.Rd
b80785aaa809120eec20fe84f239736d *vignettes/ID_MRD_001_metKidney.cbs
6837b968c578621f982664b6f48beaef *vignettes/ID_MRD_001_metKidney.sps
c433273ed3b6acae84450a565dc14fea *vignettes/ID_MRD_001_metLung.cbs
ee846819b79f1f64b57031d7c0d5c2bb *vignettes/ID_MRD_001_metLung.sps
8e23abaf58395fc8cfcec977ab9d5c6f *vignettes/ID_MRD_001_primPancreas.cbs
503326f1ccccfadb8c22fb1436e8daac *vignettes/ID_MRD_001_primPancreas.sps
6cb3f01fbbaf427d5755975256214ab1 *vignettes/expands.Rnw
291e185f5056595af2f5aa27576d8887 *vignettes/expands.bib
