ceaeb3d9b8c84e9cc58b85b87afa8236 *DESCRIPTION
ea744e0e8897a52f830dda39e0f51791 *LICENSE
d6c3d88ef3c88dfac6ddcfa4662f2d58 *NAMESPACE
050646ec5ceab2618849a49fb58eb940 *NEWS.md
9922aeffd9775ec882eabee4f4f9a443 *R/core_functions.R
fb29073ceb8039565b8925765bf5cd41 *R/data.R
d2e67e32fe3c145eaec3503b3b0a7578 *R/driveR.R
4a11710062d60acd0fc96187da42496d *R/sysdata.rda
d5648bd4ba185ed793741bb413622170 *R/utility.R
c965359db537a6e7d181cd35975b55b4 *README.md
2971f56ae941689e5775a0052379af93 *build/vignette.rds
15cbce8420d1b21181fa9e89f4c28f9f *data/KEGG_cancer_pathways_descriptions.rda
ca12fc19d95882c712e4c0607dab968f *data/MTL_submodel_descriptions.rda
e8c81b0dc50cb5a0a9e23510bdc8706f *data/example_cohort_features_table.rda
af2ea301a0d47ad61c680f99dce143cf *data/example_cohort_scna_table.rda
2eb35fd9299c6f3a3fe6bb20c303a846 *data/example_features_table.rda
d635086b4229fff9ef6c6805a946b2e7 *data/example_scna_table.rda
e2310cdbad348fbdebc1c1e110e4e2de *data/specific_thresholds.rda
444cfbbdcfb1d8877a071a886798f6ed *inst/CITATION
7adcfb42df24c53b4e8dedab04818d53 *inst/doc/how_to_use.R
6f1e0b38233428ce0d93252e355c6caf *inst/doc/how_to_use.Rmd
3e86c320742d30220b092f3604024133 *inst/doc/how_to_use.html
a2dc81def6586c6c2cc410e2e0429b53 *inst/extdata/driveR_logo.png
d71144a32cceb6490072d02591936a21 *inst/extdata/driver_workflow.png
5771490ede70c94d223ca9fb34d68f95 *inst/extdata/example.annotated_gene_list
3f4842d8f807194c277108d6ea5cd26c *inst/extdata/example.hg19_multianno.csv
59b1e90f7268523550387a958d4218c0 *inst/extdata/example_cohort.annotated_gene_list
4c15671deb2f5a97bf38ef9f4da330a7 *inst/extdata/example_cohort.hg19_multianno.csv
f5d85be218f04295c4c89025b012e879 *man/KEGG_cancer_pathways.Rd
bc63730a074c82ca13735e70461e098e *man/KEGG_cancer_pathways_descriptions.Rd
ea22639dce4ae8ed0df0b4b071572949 *man/MCR_table.Rd
e6be1e560e5c042a2cdc06eee17e46ed *man/MTL_submodel_descriptions.Rd
8e4f9b01b2b0076d1d2eab647000ef2d *man/TCGA_MTL_fit.Rd
25ab077e227def322fca68c539173645 *man/create_SCNA_score_df.Rd
d9033934d7d805974f8c6192a9a01c83 *man/create_features_df.Rd
a11685f0c6e525711eff9d797fd5ec36 *man/create_gene_level_scna_df.Rd
f783d10ea212c4532c37eeefbe2aa96e *man/create_noncoding_impact_score_df.Rd
69fd144a3bbbd1762ff9db91cae60cc3 *man/determine_double_hit_genes.Rd
ff5c8c278a7b6ccc70545636e0478be9 *man/determine_hotspot_genes.Rd
2856774a192fd0c0d1a64e9f29ac8888 *man/driveR.Rd
9e0af28da483f7e2d5f19bae96c67abd *man/example_cohort_features_table.Rd
3dc5ee647e7641b1a101aee8f3a52da5 *man/example_cohort_scna_table.Rd
fa974eb5699aa9ebad968a6ca6747d1c *man/example_features_table.Rd
a003aa00d2ec4c29243bf2653574590b *man/example_scna_table.Rd
491a7d14e0c40e13ac9abd569cae2200 *man/metapredictor_model.Rd
fdc59f8d7d10dee55fef6febb5bb0323 *man/predict_coding_impact.Rd
d428f7543c914fd442924412ef19a1d6 *man/prioritize_driver_genes.Rd
a62ebc848ff266ecdabc014123e1bc91 *man/specific_thresholds.Rd
4e0094bca757e4d6d66d51288c6869d1 *tests/testthat.R
990abd60410fc055724e7018e816ea26 *tests/testthat/test-core_functions.R
659907d4aaae48a51212ef98121cb63d *tests/testthat/test-utility.R
6f1e0b38233428ce0d93252e355c6caf *vignettes/how_to_use.Rmd
