e2ef37e4ddd277d35c66e845d772ce09 *DESCRIPTION
8f3ea01b33b72aff7edb7f6e222809ea *LICENSE
f0c2b9ad48e27990c7b072f17e3518f7 *NAMESPACE
3aae583d3e66e2b95c9b88cd149cf863 *NEWS.md
f300ec47bc6b40441c56cdbefa73a75e *R/deepredeff.R
c94d61d175107073ec904f6199762adf *R/encoding_methods.R
54d01cfdbe454f64e9fbebf1f85ce994 *R/ensemble_methods.R
47457f0fd81384e94fdcf74ba9e8638f *R/input_to_df.R
1cfac0784733a09f777b44abac65eac0 *R/install.R
e062180171bc97970299b3f5c350d77a *R/load_model.R
161cde8a32163b64370c4be41aaea782 *R/prediction.R
fa01262abe79856db6db158b92d765bf *R/prediction_helper.R
91a09872b2a521759731b7b4d82038e9 *R/sysdata.rda
0b2c83abc004b158f92b2a083a3710d7 *R/tbl_deepredeff.R
65cef5e0674056f6fc07dd2b3ca85c13 *R/utils-pipe.R
f6215435f4a51406eccd4be6c5dec7b3 *R/utils.R
430e6e8b12e1741b40d2f0aa21ad0398 *README.md
8f1fe02db95b104507da0fab965fd8ff *build/vignette.rds
3c9e2d06e8560272e30c98b0c827478b *inst/doc/overview.R
84076ceed645126677ebcd39bc343e8c *inst/doc/overview.Rmd
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1706d29586edae34a9f57ed877d7469d *inst/doc/predict.R
4ea519d86f154262df9ca91d7237162c *inst/doc/predict.Rmd
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f056fb4ce9f4a6f27e2e125682e6ac30 *inst/extdata/example/bacteria_sample.fasta
103a6b41015006e5b50a12d32657d72a *inst/extdata/example/fungi_sample.fasta
6cfd5df19348d5ce212b635ff66d6eb5 *inst/extdata/example/oomycete_sample.fasta
4aedc14c429c5c41a4783394d95b0bf3 *inst/extdata/weights/all_cnn_gru.hdf5
f2c6e81220331bbd50408b72959d947d *inst/extdata/weights/all_cnn_lstm.hdf5
8a335f7c3d9be223b922a4fac7d77e05 *inst/extdata/weights/all_gru_emb.hdf5
2010a6d713251406d7059cec37f55a89 *inst/extdata/weights/all_lstm_emb.hdf5
18a1b402d6f0d023616af855c24470bf *inst/extdata/weights/bacteria_cnn_gru.hdf5
aa41f8982b1e46af5e377a3d25fd41bd *inst/extdata/weights/bacteria_cnn_lstm.hdf5
581a12645ff1b69e8513cf07ba29bca4 *inst/extdata/weights/bacteria_gru_emb.hdf5
23ecfeb731334009458c31a4022bc16f *inst/extdata/weights/bacteria_lstm_emb.hdf5
0bab4277ba13056ea4cb242dfc652524 *inst/extdata/weights/fungi_cnn_lstm.hdf5
1d8483f7dba13d64bb6c31f14b0994a3 *inst/extdata/weights/oomycete_cnn_lstm.hdf5
dd459a996f32f8a9db2af8f1cd0b0a4f *man/aas_to_df.Rd
080c3da88304b17281322272f931b2c2 *man/aasset_to_df.Rd
1fbd10335a27f53c879c0eb052e3293c *man/deepredeff.Rd
4fcaa62815f97d6bd23877ebea9c3513 *man/encode_integer.Rd
3db0a7d01c1ccfbf267ee6c645f51928 *man/encode_one_hot.Rd
1feb57f2abbc6e7f57fc63af5f230efe *man/ensemble_weighted.Rd
19239d435d06e6bbdbdc0386a342e12b *man/fasta_to_df.Rd
d6e80dfa780011ce26d1a2f039b025f5 *man/figures/README-pred_result_plot-1.png
b7d782d58c2001d8149b6ec9d7090000 *man/figures/logo.png
c58d101cb9750bfbd3cb12c703567985 *man/get_ensemble_method.Rd
47eddfda6c66334ae7f38e0c54532acc *man/install_tensorflow.Rd
6a7b82c4decb6c2ec204910751188384 *man/load_model.Rd
4b08cd7b36bbda8f882207817eab272c *man/package_glob.Rd
4894ca10756199e25f914bfd34f517b0 *man/pipe.Rd
3acbca5e5d08fe89eddd9a1852db3a90 *man/plot.tbl_deepredeff.Rd
0b5229812865424337e1551488b6633b *man/predict_effector.Rd
ffed742400e6599b5e19f0d604a03c28 *man/prediction_mapper.Rd
db05e4addf6ee4cc3c89dec9f8dd2636 *man/summary.tbl_deepredeff.Rd
66c052d42e3e703095a50c06bb1f71b8 *tests/testthat.R
161ba50e2f267b0463ec7dbb0b55bdc6 *tests/testthat/test-encoding.R
87fec9fff52b9d72d7c7d20e9968e64c *tests/testthat/test-ensemble_methods.R
8561b0c571aed80d07e9c6c6b8566ba3 *tests/testthat/test-prediction.R
54185f021517267229144a00b562b88e *tests/testthat/test-transform_input.R
84076ceed645126677ebcd39bc343e8c *vignettes/overview.Rmd
4ea519d86f154262df9ca91d7237162c *vignettes/predict.Rmd
