5402fe83a7179c5106b3990a44daeeb4 *DESCRIPTION
52a26fa518455403230daa98d46b5379 *NAMESPACE
720bcb9d9c05cd727c76c9c859a5f0c0 *NEWS.md
dbf789ee5dd873dbd45b3220dd15e7d7 *R/add_surf.R
168064390db56eda5f8062c48801cbc4 *R/apply_xifti.R
25e4a5a40c017aef9158eed0ec26511e *R/as.gifti.R
db01bd389350a8ff5d69cae498468d32 *R/as.xifti.R
8fd3eff1f1b188c3179f96afcedb6ecf *R/ciftiTools-package.R
03c459448ee1afb9f826614284955707 *R/ciftiTools.files.R
bad4b80b904e393112600a82acf04609 *R/combine_xifti.R
285ed99714b27b724909ce4fc0f28730 *R/convert_xifti.R
253aa8384f6bce180888ae9380d447d3 *R/edit_mask_surf.R
1d1d6f8c4fd543ddb2f3b2cc25f4ace7 *R/even_vert_samp.R
61219b63440079d816cc16386a2f6442 *R/expect_equal_xifti.R
3e44cc9ffcdf00a9b79522c7ae35de07 *R/fix_gifti_mwalls.R
b5ac2a25b08664d4ee2d563d6a69b1ab *R/fix_xifti.R
67f4edd9ef36e1ca318de5d70ea92394 *R/flatten_xifti.R
f389499beed36ce8e680bc69752c1823 *R/info_cifti.R
efe6ff52474da1073b9f1378df33ac63 *R/is.xifti.R
a6de537f6f9bb5772710ef283006c4f9 *R/load_parc.R
857acfbfad5e0da62ee30c4f22b37225 *R/load_surf.R
21a0ae7c89810998055463bc392cd8ca *R/make_xifti.R
0d9b941f7daeacdc12e127b30eec495f *R/make_xifti_components.R
24696d32520fb1f425b7915e8acd8019 *R/merge_xifti.R
db04c7e9c068b131556634457dca0bac *R/move_mwall.R
dbb85cb0b90e4688dd5bbacb76e7d71d *R/newdata_xifti.R
daa25afab48ef5b2d8f9c55bb99a4150 *R/onAttach.R
c730fdaf6883713b122d76ce31119756 *R/options.R
b6b97e9799a7ba94f0aa1ca8f47eda25 *R/parc_utils.R
0691c2033a4f67254b0c298473330914 *R/read_cifti.R
a20c376c6dda9e6c995301ca866bd93b *R/read_cifti_convert.R
bc1c4309413ec2b932b8cbdc381511d6 *R/read_cifti_flat.R
72d79c371bb99566ea607b789b73e610 *R/read_cifti_separate.R
b920aad5a9aae7e0978bc5c59541dbae *R/read_surf.R
444fadaa0ec751e4a40e2221b35d956c *R/read_xifti2.R
da5b15f7bcaa66576dba56d65c425021 *R/remap_cifti.R
40749575bf2445adb11e705cb7a0e409 *R/remap_gifti.R
417ec65acc3ae5d1bfedcc21021aebf1 *R/remove_xifti.R
d5a0b649c6679bb3312db68b26561935 *R/resample_cifti.R
70de48ed0613bc4f57653ece6f36b79c *R/resample_cifti_components.R
95ae9b841fdde69e2d5dd6d6214c7658 *R/resample_cifti_from_template.R
3e1e37c89a30f72f75d0d5c7c97ec1a5 *R/resample_gifti.R
752db1e9c6759e79cb3337aaded45f74 *R/resample_surf.R
0dbdb34f19dc9f7189221d20a6f906d7 *R/rotate_surf.R
d230ae13d8e9866d28a65a9c36ac52c2 *R/rox_args_docs.R
b5bc2df4497414b949ca6052d573cfb3 *R/scale_xifti.R
bf846aff99b6ce7eb0e1bff90a58b435 *R/select_xifti.R
7d272c8b17d4e116ab9b7e5805c5c6ec *R/separate_cifti.R
b2d2e7df76ee9f1eb5b36456de68eb7a *R/set_names_xifti.R
f2fa3993cb7f9d2ab20360d93817c013 *R/smooth_cifti.R
6452527a9949d4f67e1457898f8f2293 *R/smooth_gifti.R
5e203ca52f2ac087cfae46c317ca8ebf *R/surf_area.R
c49374ddeffb43f356850a11042b2cce *R/sysdata.rda
eed99c9636edd1f8510f3a75f438a47c *R/template_xifti.R
ff37bd1a0a538d82d2ec3fbd2bb3dd38 *R/transform_xifti.R
d22bab43942610b4b0019ff259b75f68 *R/utils.R
1d09f4b0546aaf2f2a05fa5f6b6a4c50 *R/utils_color.R
78434d1acea5a6387ce616e266749c08 *R/utils_surf.R
6a7cca951c9f63e3e489a798626038f3 *R/utils_volume.R
fb9b3c837a68a8496d61fef9ee6a507b *R/utils_xifti.R
72436628cf058d82cc28fff82d8683df *R/view_comp.R
22cefaf3244d00695fbaeebf3ee21741 *R/view_surf.R
60199911c133be369c01853976a1ebde *R/view_xifti.R
e81a635ddd041161ee29aee21e5d203d *R/view_xifti_surface.R
565841fce94e868c2df36c9d3c48db65 *R/view_xifti_volume.R
79e02e53e1b31f9d0ce16c91e8bcf1ab *R/wb_cmd.R
c1cafa2fd5c494fee1309a2941320bba *R/write_cifti.R
73eb8124b01480a533483144071feb6f *R/write_cifti_from_separate.R
4493ce3e732593d1e25d7922c227b80e *R/write_gifti.R
60fb55fd88534fd51b2a3a10deef9794 *R/write_nifti.R
569031454f4b030a514dcdcfc1484b17 *R/write_xifti2.R
826c936a7b18d7e7e439c18166489769 *README.md
761810c1d3c77fc6d0025d47b14619fb *inst/CITATION
3ad43d455ecfc549e0a6c45739ab103b *inst/extdata/Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii
1c189c7e88dcf539c9cb33f14d319371 *inst/extdata/Conte69.MyelinAndCorrThickness.6k_fs_LR.dscalar.nii
94072903021f0dedbefc2abd6b18732c *inst/extdata/Conte69.parcellations_VGD11b.6k_fs_LR.dlabel.nii
22dd506521f5ba91bed21920fe0bb1ed *inst/extdata/MNI152_T1_2mm_crop.nii.gz
007dfbcb8f694a2e08967215bfdf0396 *inst/extdata/README
5841217309284d3950d31924b0db51e8 *inst/extdata/S1200.L.inflated_MSMAll.32k_fs_LR.surf.gii
cb40a4a25e09374e567c5fce094cab60 *inst/extdata/S1200.R.inflated_MSMAll.32k_fs_LR.surf.gii
086f0a9e2877f59187cfea6642d08d92 *inst/extdata/ones_1k.dscalar.nii
aa1361279352ef4c58e7b5c0e7921798 *inst/extdata/subcort_label_list.txt
16f4d542f328ddbb925032d8f35f9bf5 *man/ROI_brainstructures_Param_LR.Rd
9b308563fe76b9598a12f3208f0a0ccf *man/ROY_BIG_BL.Rd
9a17545badcd129db54c0acf76dd2a61 *man/S3_Math.Rd
31423912602b7172b97e2bfaa347e283 *man/S3_Ops.Rd
71ba2fa02988eaadd883b3484e845f9e *man/S3_Summary.Rd
0572c19c17fa0abe2ed83e7ea0cf9736 *man/add_surf.Rd
42c297b04ef0c2b8b1bc02e5f52ed75f *man/all_integers.Rd
c21366a80336c2ab5eea748dc73a1fc8 *man/apply_parc.Rd
e800dd449a83e656ae832e67e96414d8 *man/apply_xifti.Rd
9e27ea3473e4f163ad7869a09db27cd6 *man/area_original_Param.Rd
84377eaf4fc60d9fef2503f188ed296b *man/area_target_Param.Rd
b8b31e89cfe7244d3f0a53428a4c9803 *man/as.matrix.xifti.Rd
c3f0bc6e16cd5350eb9fc916a570bf3d *man/as.metric_gifti.Rd
0577c7aa01ba133d2dd053ff26fa62c4 *man/as.surf_gifti.Rd
d10a50aeac4e75d0cab963513cae3a09 *man/as.xifti.Rd
b71644e313da84e594d15586509b9850 *man/assure_parc.Rd
2ee2f25b716a4897eb5fbce3e55fd8a2 *man/boundary_mask_surf.Rd
c463a4644e5eb8bd09735fd14bb2daae *man/brainstructures_Param_LR.Rd
27e503e1bf32c5550cc46fe25ae97b8e *man/brainstructures_Param_all.Rd
eccea83eb3d4cf60490f1fb04e1dadc7 *man/check_cifti_type.Rd
73d1dc8d54dde5f782917612b78762db *man/ciftiTools.Rd
36a49edd14b273e083894041d79d9904 *man/ciftiTools.checkOption.Rd
45e92d2d94785a5f4bc65861e1797731 *man/ciftiTools.files.Rd
e021a587853ab1accabd93b9ce7a371d *man/ciftiTools.getOption.Rd
441f5db2fcba29c403508a89b64b26b6 *man/ciftiTools.listOptions.Rd
c1b8f4a88288c17016f5c9e48498c86c *man/ciftiTools.setOption.Rd
df3098800e2017985c1bb7dd2e5e2264 *man/ciftiTools_msg.Rd
dc6a0888df3226475ecab2c1a5f8b9fc *man/ciftiTools_warn.Rd
3462497f58ee4034caec0340fbc5af31 *man/cifti_component_suffix.Rd
a0918dc505600cedf66b4355cf40362e *man/cifti_fname_Param.Rd
91097b6e1af3580bca04909cf89972f6 *man/combine_xifti.Rd
80d840a207d9c41a6e30391cf14b1553 *man/confirm_wb_cmd_path.Rd
f5d39008276df033b704b54e2d21dca5 *man/convert_xifti.Rd
0dbca6b9a14e61d5ca898f93683aa5b5 *man/coordlist_to_vol.Rd
ebbca38f602c8804a545ad8d20429063 *man/crop_image.Rd
0566f932fca7ca61f039952b94f7be5c *man/crop_vol.Rd
294c60d8a12800aa429bf1170da6c305 *man/dim.xifti.Rd
52bc00cfe443ed19d1b220ff33bb751d *man/dist_from_mask_surf.Rd
9fa030911be795f7689c7d43e912b2d5 *man/dot-onAttach.Rd
1ed8103648b55a487448e2466e21c6ae *man/edit_mask_surf.Rd
69537b056ae1839d5f7c13e603135846 *man/even_vert_samp.Rd
1c567d0f543a9bdc2dbed33b983f67b1 *man/expand_color_pal.Rd
248f578dbf87f33034ff8dbbd80d0dcf *man/expect_equal_xifti.Rd
58aadc6c69499135b15da48261ccae6e *man/faces_Param.Rd
a756d8854ee953e5a8dd522038d61e39 *man/fix_gifti_mwall.Rd
ac418b6105575b9aa7a4913636c21e16 *man/fix_xifti.Rd
3e7da7183e48166816f1970a9fd9fa0a *man/flatten_xifti.Rd
5d473847347ea7909b42effadb9dd2ca *man/format_path.Rd
7f388613e4f6b0ebce43a2d7823e8dae *man/get_cifti_extn.Rd
5f294e623f1b71a61c2d71df34745a74 *man/get_data_meta_from_cifti_xml.Rd
f037c8c6d35added5083d187aa06a4f4 *man/get_intn_meta_from_cifti_xml.Rd
1af86bad2dea7747933e0f80c3c23dcb *man/get_kwargs.Rd
2b7abdb34b45e58ae967a20a255bba9f *man/get_misc_meta_from_cifti_xml.Rd
601f32ff4a540281de4fe33cbfbaa8d9 *man/get_wb_cmd_path.Rd
1cf8350d5849ba90e1aac5a09c452a9f *man/header_cifti.Rd
d3a96c5aa5cfcb3a7bb8ef98427baea4 *man/idx_Param.Rd
6bd1882422c75296804f4248359991b8 *man/infer_resolution.Rd
6cb9bc2a449624bfad189c17fe0e919c *man/info_cifti.Rd
5a366a163da890dd30643a450350811b *man/is.3D_mask.Rd
a2c3758f3ea897ad26f4acf45af537da *man/is.cifti.Rd
f71fd79d7a30973b0f830cce79e3ef4b *man/is.fname.Rd
bf16fb43b8d47c61797f84e8fc65d167 *man/is.nummat.Rd
da3b4b5ebbcc7e9e2de853764272b770 *man/is.subcort_labs.Rd
0c426b7a63be4c6cbac960afea979377 *man/is.surf.Rd
b2614109d1f684d47b781510c2310fad *man/is.xifti.Rd
7bd80ae886ebd7cad26cdb3ad1e19371 *man/is.xifti_data.Rd
cb11efefd75b7eac12087bc11b635043 *man/is.xifti_meta.Rd
07815c75dc76c97f5754aca70b77c602 *man/labels_Description.Rd
b52a518c4149d3ebc1be3af007e277fa *man/load_parc.Rd
4f6818553de7ecd400a1d1ebcce990b0 *man/load_sub_parc.Rd
0baf4b0e3b7dc2bacbbc9fc3adacad66 *man/load_surf.Rd
2943aadbf48a0559a362d77c6edce3e5 *man/make_color_pal.Rd
7b6f43d38a13a4a9c51dd51ecdce2ed8 *man/make_cortex.Rd
1c7a801eb29dd066da39ab616ca7e056 *man/make_subcort.Rd
2c5ed9e675cd42e64cc8266895c762c4 *man/make_trans_mat.Rd
1a18536d8aa4204cbe2c1b300b5c4cd7 *man/make_xifti.Rd
efb55430689768c25c1d6af0c9de2297 *man/mask_Param_vertices.Rd
a16c3fe663b450718469d5ef1e96af95 *man/mask_surf.Rd
cf3802fe198d5fd1740dc2739715503a *man/mask_with_boundary_surf.Rd
609a389f5c1c71fe6b5035b8246c38da *man/match_exactly.Rd
fcb44c3c4c41360a7f4d7d33a14c4d2e *man/match_input.Rd
9c453de55ede3710a8d4a50acd610647 *man/merge_kwargs.Rd
61bcc4d64ae4f640ee44d25d6253ca07 *man/merge_xifti.Rd
968b57610d9eca0af3f6ac004f4f8d56 *man/move_from_mwall.Rd
202c5b1518f22594a610bfac20258869 *man/move_to_mwall.Rd
e83661f1c506bf932bed24b09f00c043 *man/ncol_xifti.Rd
b2863d00d5153c4b4988b6332e52ea80 *man/newdata_xifti.Rd
13d012c26c14c0d7979b1d9fda7b7fc3 *man/nrow_xifti.Rd
7c6fe5abca7c88ee92672661792cff27 *man/original_fnames_Param_remapped.Rd
9079ab6bdcd706397b57b06db88a0e32 *man/original_fnames_Param_resampled.Rd
946911dc12d0b0030be3b065832597f3 *man/pad_vol.Rd
d8b855d76f72bc82324a6af5ec2e9757 *man/parc_add_subcortex.Rd
e108e5bbf7e90f76d3d8167be240b5e5 *man/parc_borders.Rd
8a40c1fe96ebdb7232fb3f88c5e9687f *man/parc_mean_mat.Rd
7cf2f8f4f6f171b292f77f569d178ab0 *man/parc_vals_to_xifti.Rd
000e22d6b69de60f6799d28bf8183031 *man/plot.surf.Rd
7d22a3311e412abfa248d3c915a37cdb *man/plot.xifti.Rd
73738912b3099cbff527e6cf08b77e72 *man/radial_order_surf.Rd
13367306f03d4c52f01dcb4d35bd48e8 *man/read_cifti.Rd
66ed8ebb9cbf855957d2d00e060bd0a0 *man/read_cifti_convert.Rd
ef010460e3b739c181786222a8a70674 *man/read_cifti_flat.Rd
e81ec711f030c110f163c0a33225c331 *man/read_cifti_separate.Rd
e84432162aac14283c37d3d8fb7c56fc *man/read_dir_Param_separated.Rd
924fb221cf395ba7de0f82dd3cab9865 *man/read_surf.Rd
ee393c246ee60277f98441dfc28c6509 *man/read_xifti2.Rd
934a6b8ed892033e3dea3516787bc691 *man/remap_cifti.Rd
361b8d4648ebb7d5c788c6fdc4129125 *man/remap_cifti_wrapper.Rd
0fb477eb3765bcfa3b398be50c6768da *man/remap_gifti.Rd
bb1ec12bd9f80fc288b487a566b87421 *man/remove_xifti.Rd
8df1a7ecba33b11112cdbd8a700687f4 *man/resamp_method_Param.Rd
e7a210454583829271145ac055736ae9 *man/resamp_res_Param_optional.Rd
5f04b2709e237f479e25a25071de0acf *man/resamp_res_Param_required.Rd
620505351c2118e95fa337eb521e04b1 *man/resample_cifti.Rd
6f0178bd483dbd49a08f46815d4e0229 *man/resample_cifti_components.Rd
28d4850ea038bff8818cc506542d2d47 *man/resample_cifti_default_fname.Rd
e628707d0ac3aa430bf1e5608691586a *man/resample_cifti_from_template.Rd
776e57fcc71b5c9997a664ced898e437 *man/resample_cifti_wrapper.Rd
46f09a3b137c0449b6a754353932fb71 *man/resample_gifti.Rd
98eb6f9dc136ed6f844bcb733e9744e9 *man/resample_surf.Rd
4cc2636bd9e827260874cc933e89b44b *man/rgl_interactive_plots_Description.Rd
3c58a761a1362253a9ee09256bb32aa0 *man/rgl_static_plots_Description.Rd
dc6af519465fd2e94d98cda2b1aa6931 *man/rotate_surf.Rd
63bccf000f96a42b5fe81d25df1369b8 *man/run_wb_cmd.Rd
7de72f07b4b1b6823b14f13442e8d0aa *man/scale_xifti.Rd
e12c7a7d67f682f1824ab732850298e8 *man/select_xifti.Rd
f0700c85d50155f4b915a34287b3a460 *man/separate_cifti.Rd
c52c1536f938cbb461f66a17fa7d9d27 *man/separate_cifti_files.Rd
5b53a37b8e2505d59dcdc7f697892dc0 *man/separate_cifti_wrapper.Rd
4b94689e919e60fb251769df6049f671 *man/set_names_xifti.Rd
fa763c265f3c623b22bb45db1f38f6cc *man/smooth_cifti.Rd
7ed6f622cbbe7ce81b83cc0f607f150f *man/smooth_gifti.Rd
31cd4ebffe7b20c1e04ab9377c018ddb *man/substructure_table.Rd
7308cb50d4c1ccccab59a6c6762481ee *man/summary.surf.Rd
71dc1640a681f31e0362f797c2a61f93 *man/summary.xifti.Rd
a22d476c463ca1ac71ac290fdee28fc7 *man/supported_intents.Rd
241f8c4305f8d5248a3fb9d42d2826c4 *man/surfL_Param_optional.Rd
57a3fdc64165a4afa1c6581964166aa0 *man/surfL_fname_Param.Rd
260959be030fd82269649c9f366eebc7 *man/surfL_original_fname_Param.Rd
a548561a36887b2d42e5eff089303340 *man/surfL_target_fname_Param.Rd
f03b0acdeca82aa2f0913d2d8d250df4 *man/surfR_Param_optional.Rd
c25ad8fe4f6843892576fa5eca380c5a *man/surfR_fname_Param.Rd
97e513e58a136a502c10fc6d6909f78f *man/surfR_original_fname_Param.Rd
0b03f5826f136ab15ed42a1ee85a275a *man/surfR_target_fname_Param.Rd
7cc21bdfccf9ebdb39e18906a3f77788 *man/surf_area.Rd
ab05afad9872c1a5a10483b9907e950c *man/surface_plot_Params.Rd
416d8951c4b2c76633ade60f1f161f8a *man/sys_path.Rd
eaf36497b9431d4d52127411f89d0c0e *man/template_xifti.Rd
73b8a23fa78d655ece0892a9b0df7850 *man/transform_xifti.Rd
4d267cccefa8ac7b35961a8466907ea2 *man/unmask_cortex.Rd
b4de7ca72b03f55720bd3618834ba733 *man/unmask_subcortex.Rd
66404583ee1e6ac7b0e56c46c4d6c39c *man/unvec_vol.Rd
d86c772b08b940f762ccc4f97a8cba73 *man/use_color_pal.Rd
81ac69d7b31383107e311e9614c5e550 *man/verbose_Param_FALSE.Rd
9129067d0595a7956356e299d86e8c6d *man/verbose_Param_TRUE.Rd
0ba778f0d46b15eee76d4187d4a7779b *man/vert_adjacency.Rd
0c902f10cc3fd639b86ad0bce7abb717 *man/vertices_Param.Rd
41d0e50bfdc4ab583ff1b77d2a9352b6 *man/view_comp.Rd
420ec1fc4981da6632f985dc37e073c5 *man/view_surf.Rd
2dca439eabff9f0677655e9d34c1a561 *man/view_xifti.Rd
1caa4976c844b15b4e84ba8e5dade6a9 *man/view_xifti.cbar.Rd
d609e0cb33df9b375e91c2a52a9290c5 *man/view_xifti.cleg.Rd
495d94a8d458f76c7d63d766e0108c7c *man/view_xifti.title.Rd
e748a2b1e48c42d96532010f21f9faef *man/view_xifti_surface.Rd
21e9252522fe6c958a4eacd0938179e7 *man/view_xifti_surface.color.Rd
691de18c70a4d84fecc759bce994b138 *man/view_xifti_surface.draw_mesh.Rd
8e34822406de7ed63e1f0fd17856c46f *man/view_xifti_surface.draw_title.Rd
3b467e084acd5ee19d6685b078ae122c *man/view_xifti_surface.mesh_val.Rd
1f03a1f3d95b3a18acfa0f99a452edc8 *man/view_xifti_surface.surf_hemi.Rd
d7eceec2a10ff2aaa7224b85a001e9f7 *man/view_xifti_volume.Rd
f94a133140904ae963fc3c6cfa23b029 *man/vox_locations.Rd
d09751c59c965e0f3821b0ba10275ebd *man/wb_path_request.Rd
6e55c8f065cdd9fcc39a3ac6563711a3 *man/welcome_msg.Rd
9b0ded8c8f9bb339a50abbc09ee24c8e *man/write_cifti.Rd
3f1c6c1de80ec85cc923514c1ef70e03 *man/write_cifti_from_separate.Rd
4a73d69c3d2ebcff382b1235f7c90c03 *man/write_dir_Param_generic.Rd
6050f43dfdbe93ce4d40f0d1e4d76342 *man/write_label_table.Rd
b44744f761b819f3dc323aafc1cbf53b *man/write_metric_gifti.Rd
a2d358cb3e4c74ddee2eb1169d336cf7 *man/write_spheres.Rd
fbb1e98b7f7acbf88566d856f4ea05cf *man/write_subcort_nifti.Rd
4be79c58f9fb8b0d8e26846ea349841e *man/write_surf_gifti.Rd
86e6dff9d46d0e3116ad73a306154912 *man/write_xifti2.Rd
62cc043b60c815278386235907267b2b *man/x_Param_xifti.Rd
fdc33a269d24e2907bf06f186e8d1f52 *man/xifti_Param.Rd
d9dcb65e27f694c1b49906f3c67ddd20 *man/xml_cifti.Rd
bc4468db677a7a19caec725dedc4c928 *tests/testthat.R
793c8e7b5d6a85ba9f7659b6c3d50fa4 *tests/testthat/test-misc.R
95c2bf0faa4c52553a06b7d26275eac8 *tests/testthat/test-plotting_sub.R
65842867f71f6a834f8f6e1852bb381c *tests/testthat/test-plotting_surf.R
9d6af20a313390e5437ec24f1f9c5ae4 *tests/testthat/test-plotting_together.R
1e82a215381725afba45e98370d145eb *tests/testthat/test-reading.R
0b8190d012ce854b76825f6932cc9394 *tests/testthat/test-resampling.R
3fafeb5e5307ce536224aeca2db3f250 *tests/testthat/test-writing.R
