029507a4a7ee6cf062561cb4478b8b4d *DESCRIPTION
a124fc156de751e66fd59e9028b28657 *NAMESPACE
e69215a5cc715a9a18cb8d2ea17a9244 *NEWS.md
a23494ccfa3aeeb60c7a905fc29f4fc0 *R/add_surf.R
72594198c6d513f807ce63f8e33529f2 *R/apply_parc.R
e79ae9059097a8b4741ce0d7712634e3 *R/apply_xifti.R
c89721a3b94597c7885c73f30ad580cf *R/as.gifti.R
3d9700bfdb28286daf7be6179b1f42f0 *R/as.xifti.R
3f624b2da991613fead767fe59dfe334 *R/ciftiTools-package.R
03c459448ee1afb9f826614284955707 *R/ciftiTools.files.R
f7ddfe428bb81c79b893b369a327ca80 *R/combine_xifti.R
ddd25bf61806e7da24154426138f010a *R/convert_xifti.R
b88fc457d001c8d3a000eebc131a374e *R/edit_mask.R
3bf60e16e830b7c179e57ea27973836c *R/even_vert_samp.R
61219b63440079d816cc16386a2f6442 *R/expect_equal_xifti.R
3e44cc9ffcdf00a9b79522c7ae35de07 *R/fix_gifti_mwalls.R
b5ac2a25b08664d4ee2d563d6a69b1ab *R/fix_xifti.R
67f4edd9ef36e1ca318de5d70ea92394 *R/flatten_xifti.R
62fbd000773882d2934788822e47526c *R/info_cifti.R
0a72347d68896babef4e8e46ca92ddd2 *R/is.xifti.R
5632d82bca194f3224c5122233105bb8 *R/load_parc.R
b4b0ccebc1a3dcce0a0d6580ad566439 *R/load_surf.R
75f92886959f61b0560545a72fd70f41 *R/make_xifti.R
d6026d434512cfe88f72ed121aeea9f6 *R/make_xifti_components.R
ead3d838e44aee2e9c14242abd300e6f *R/merge_xifti.R
4ba85a0765032ac99ac432f3ac8b7e8c *R/move_mwall.R
3afd3f0dd95ff6e7c43f890e910b3689 *R/newdata_xifti.R
daa25afab48ef5b2d8f9c55bb99a4150 *R/onAttach.R
c730fdaf6883713b122d76ce31119756 *R/options.R
968f93f9bf99ed330d2eb2815dc20b15 *R/parc_borders.R
275233aa0f419c9cb0644bd2d301f15e *R/read_cifti.R
a20c376c6dda9e6c995301ca866bd93b *R/read_cifti_convert.R
962a7f05d26a23b97e8751ca6aebefe3 *R/read_cifti_flat.R
5d28e6eb493d17abe10becfc86709e9a *R/read_cifti_separate.R
d432b2085e1fd626d74afdef3bcf12fc *R/read_surf.R
75b300db46efabc650af23e68fdcb5c4 *R/read_xifti2.R
5c8cfd65afad5f142e140d6626eac4aa *R/remove_xifti.R
d5f63ee7806c460ff2b68a059af2e946 *R/resample_cifti.R
270eb9612c619532e7db0edc25dd0077 *R/resample_cifti_components.R
9a605706002d345c77cf6f1275820e58 *R/resample_cifti_from_template.R
5b0a047719bc64f1821fd160be2d0297 *R/resample_gifti.R
9895d299a07f3b67512e04ffb3b6dc31 *R/resample_surf.R
7e00b1a33f8046bd8315330945615148 *R/rotate_surf.R
d0e94dcce823b2986f36ed9cf457b22a *R/rox_args_docs.R
1b3f63d9f4740430fc64f389581f991e *R/scale_xifti.R
eb4ac17a36ed98f4f8ed1646f143176b *R/select_xifti.R
0d1ff850341eb7ca102fc66d5caf306c *R/separate_cifti.R
96930e9cdeb6f404956f1e3a7d16e34e *R/set_names_xifti.R
97bb55679a697733e843a2e3f8945679 *R/smooth_cifti.R
d693f2f6d3c4bf4aa3aeecf5568f51b6 *R/smooth_gifti.R
c49374ddeffb43f356850a11042b2cce *R/sysdata.rda
91034db88b86877b9aa023571749a106 *R/template_xifti.R
62cc67ee2c28519eff1fcba672114afe *R/transform_xifti.R
d22bab43942610b4b0019ff259b75f68 *R/utils.R
d273633052e08a467c69f8ac1b4274b5 *R/utils_color.R
4ce0b3cc997fc366fc4c1e9b51a167c2 *R/utils_surf.R
b99b1ff7579dbe2102529db9ea483bd7 *R/utils_volume.R
9a3db6a3a0c4ba8c865039ffdc67b64a *R/utils_xifti.R
f991a86d39b0e7870a8eb54b9cde3112 *R/view_comp.R
e40251be894a4ef4ef92c04ee7ce7fac *R/view_surf.R
c4f2bfb12debfda961781d693dacf0ab *R/view_xifti.R
0b8ff916181a526654479b48281c801d *R/view_xifti_surface.R
3d2babdcb9ae73296b695a666999fbe5 *R/view_xifti_volume.R
79e02e53e1b31f9d0ce16c91e8bcf1ab *R/wb_cmd.R
7878f7f50fc613081de816cf8d63c31b *R/write_cifti.R
73eb8124b01480a533483144071feb6f *R/write_cifti_from_separate.R
713ea05281cbe01248a2a91a811924e2 *R/write_gifti.R
a756735278054e1a437a2ab1d91ae09d *R/write_nifti.R
90e01537818ac77dc8181e67c40b395e *R/write_xifti2.R
fe3ba98c0cbe2f8ea78443899e7d00b5 *README.md
761810c1d3c77fc6d0025d47b14619fb *inst/CITATION
3ad43d455ecfc549e0a6c45739ab103b *inst/extdata/Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii
1c189c7e88dcf539c9cb33f14d319371 *inst/extdata/Conte69.MyelinAndCorrThickness.6k_fs_LR.dscalar.nii
94072903021f0dedbefc2abd6b18732c *inst/extdata/Conte69.parcellations_VGD11b.6k_fs_LR.dlabel.nii
22dd506521f5ba91bed21920fe0bb1ed *inst/extdata/MNI152_T1_2mm_crop.nii.gz
007dfbcb8f694a2e08967215bfdf0396 *inst/extdata/README
5841217309284d3950d31924b0db51e8 *inst/extdata/S1200.L.inflated_MSMAll.32k_fs_LR.surf.gii
cb40a4a25e09374e567c5fce094cab60 *inst/extdata/S1200.R.inflated_MSMAll.32k_fs_LR.surf.gii
086f0a9e2877f59187cfea6642d08d92 *inst/extdata/ones_1k.dscalar.nii
aa1361279352ef4c58e7b5c0e7921798 *inst/extdata/subcort_label_list.txt
16f4d542f328ddbb925032d8f35f9bf5 *man/ROI_brainstructures_Param_LR.Rd
10cbcdcf86082ce0713c0e1294abead7 *man/ROY_BIG_BL.Rd
9a17545badcd129db54c0acf76dd2a61 *man/S3_Math.Rd
31423912602b7172b97e2bfaa347e283 *man/S3_Ops.Rd
71ba2fa02988eaadd883b3484e845f9e *man/S3_Summary.Rd
d6477aa3a6e14fa9bdbcd4dcc71f461c *man/add_surf.Rd
42c297b04ef0c2b8b1bc02e5f52ed75f *man/all_integers.Rd
437463c292616f7a24929c38cee84c5d *man/apply_parc.Rd
c0675fe3d5c42d6866dd89c0d1cdce21 *man/apply_xifti.Rd
b8b31e89cfe7244d3f0a53428a4c9803 *man/as.matrix.xifti.Rd
df3447a4e5f506d6fba6256c6c14e082 *man/as.metric_gifti.Rd
0577c7aa01ba133d2dd053ff26fa62c4 *man/as.surf_gifti.Rd
9a52dfb5fa10be13cd712879872544ee *man/as.xifti.Rd
faafdb88d6b392f9a167d201b3ba0650 *man/boundary_mask_surf.Rd
c463a4644e5eb8bd09735fd14bb2daae *man/brainstructures_Param_LR.Rd
27e503e1bf32c5550cc46fe25ae97b8e *man/brainstructures_Param_all.Rd
eccea83eb3d4cf60490f1fb04e1dadc7 *man/check_cifti_type.Rd
1c708d46c24a2ba58adcd829d4010b59 *man/ciftiTools.Rd
36a49edd14b273e083894041d79d9904 *man/ciftiTools.checkOption.Rd
45e92d2d94785a5f4bc65861e1797731 *man/ciftiTools.files.Rd
e021a587853ab1accabd93b9ce7a371d *man/ciftiTools.getOption.Rd
441f5db2fcba29c403508a89b64b26b6 *man/ciftiTools.listOptions.Rd
c1b8f4a88288c17016f5c9e48498c86c *man/ciftiTools.setOption.Rd
df3098800e2017985c1bb7dd2e5e2264 *man/ciftiTools_msg.Rd
dc6a0888df3226475ecab2c1a5f8b9fc *man/ciftiTools_warn.Rd
3462497f58ee4034caec0340fbc5af31 *man/cifti_component_suffix.Rd
a0918dc505600cedf66b4355cf40362e *man/cifti_fname_Param.Rd
1c6ff4c21d458de05a3f11e284abb475 *man/combine_xifti.Rd
80d840a207d9c41a6e30391cf14b1553 *man/confirm_wb_cmd_path.Rd
eb7272858179f1892a6efc081521c427 *man/convert_xifti.Rd
0dbca6b9a14e61d5ca898f93683aa5b5 *man/coordlist_to_vol.Rd
ebbca38f602c8804a545ad8d20429063 *man/crop_image.Rd
0566f932fca7ca61f039952b94f7be5c *man/crop_vol.Rd
294c60d8a12800aa429bf1170da6c305 *man/dim.xifti.Rd
52bc00cfe443ed19d1b220ff33bb751d *man/dist_from_mask_surf.Rd
9fa030911be795f7689c7d43e912b2d5 *man/dot-onAttach.Rd
52b4345c480e0c30c33cf32447ea4ad2 *man/edit_mask_surf.Rd
6fca4c516fb030ddc310804dfa4c04e0 *man/even_vert_samp.Rd
a608c66869d0fdf3762cf2c5c3bb4118 *man/expand_color_pal.Rd
248f578dbf87f33034ff8dbbd80d0dcf *man/expect_equal_xifti.Rd
58aadc6c69499135b15da48261ccae6e *man/faces_Param.Rd
a756d8854ee953e5a8dd522038d61e39 *man/fix_gifti_mwall.Rd
ac418b6105575b9aa7a4913636c21e16 *man/fix_xifti.Rd
3e7da7183e48166816f1970a9fd9fa0a *man/flatten_xifti.Rd
5d473847347ea7909b42effadb9dd2ca *man/format_path.Rd
7f388613e4f6b0ebce43a2d7823e8dae *man/get_cifti_extn.Rd
5f294e623f1b71a61c2d71df34745a74 *man/get_data_meta_from_cifti_xml.Rd
f037c8c6d35added5083d187aa06a4f4 *man/get_intn_meta_from_cifti_xml.Rd
1af86bad2dea7747933e0f80c3c23dcb *man/get_kwargs.Rd
2b7abdb34b45e58ae967a20a255bba9f *man/get_misc_meta_from_cifti_xml.Rd
601f32ff4a540281de4fe33cbfbaa8d9 *man/get_wb_cmd_path.Rd
1cf8350d5849ba90e1aac5a09c452a9f *man/header_cifti.Rd
d3a96c5aa5cfcb3a7bb8ef98427baea4 *man/idx_Param.Rd
29dc5cea2cc8175ebe3a634255ef057b *man/infer_resolution.Rd
6149225f66349261fcdb883463166851 *man/info_cifti.Rd
5a366a163da890dd30643a450350811b *man/is.3D_mask.Rd
f727d6a0203d6d6cdf7a30c5d5399133 *man/is.cifti.Rd
f71fd79d7a30973b0f830cce79e3ef4b *man/is.fname.Rd
bf16fb43b8d47c61797f84e8fc65d167 *man/is.nummat.Rd
da3b4b5ebbcc7e9e2de853764272b770 *man/is.subcort_labs.Rd
1f8fb35f5cf06e53e4276db22b2c59cd *man/is.surf.Rd
b2614109d1f684d47b781510c2310fad *man/is.xifti.Rd
7bd80ae886ebd7cad26cdb3ad1e19371 *man/is.xifti_data.Rd
cb11efefd75b7eac12087bc11b635043 *man/is.xifti_meta.Rd
07815c75dc76c97f5754aca70b77c602 *man/labels_Description.Rd
841b6f853d9d1e65dcc411cf45dd3659 *man/load_parc.Rd
ba4a71098ca8d95fb581d7cc1882a81c *man/load_surf.Rd
55e43222ac794f337ea3aedea43feb9a *man/make_color_pal.Rd
7b6f43d38a13a4a9c51dd51ecdce2ed8 *man/make_cortex.Rd
65c7cec71457697823658b78faaceebf *man/make_subcort.Rd
2c5ed9e675cd42e64cc8266895c762c4 *man/make_trans_mat.Rd
e66db5905f3bfba9af90c2cf4be6ad29 *man/make_xifti.Rd
efb55430689768c25c1d6af0c9de2297 *man/mask_Param_vertices.Rd
682b0ac3aa064fa97d1cd6d8c965e5a9 *man/mask_surf.Rd
cf3802fe198d5fd1740dc2739715503a *man/mask_with_boundary_surf.Rd
609a389f5c1c71fe6b5035b8246c38da *man/match_exactly.Rd
fcb44c3c4c41360a7f4d7d33a14c4d2e *man/match_input.Rd
9c453de55ede3710a8d4a50acd610647 *man/merge_kwargs.Rd
059e28ce2fa9f88a072104304a323f30 *man/merge_xifti.Rd
968b57610d9eca0af3f6ac004f4f8d56 *man/move_from_mwall.Rd
75034b96963a3b598f0bf3762ba7f0eb *man/move_to_mwall.Rd
e83661f1c506bf932bed24b09f00c043 *man/ncol_xifti.Rd
d3c1761ab00f03839d0e94ab5a216907 *man/newdata_xifti.Rd
13d012c26c14c0d7979b1d9fda7b7fc3 *man/nrow_xifti.Rd
9079ab6bdcd706397b57b06db88a0e32 *man/original_fnames_Param_resampled.Rd
946911dc12d0b0030be3b065832597f3 *man/pad_vol.Rd
54a50de9239315622b2faebb2726f280 *man/parc_borders.Rd
000e22d6b69de60f6799d28bf8183031 *man/plot.surf.Rd
7d22a3311e412abfa248d3c915a37cdb *man/plot.xifti.Rd
73738912b3099cbff527e6cf08b77e72 *man/radial_order_surf.Rd
0dd14f767385710e7904e06bb6911d66 *man/read_cifti.Rd
66ed8ebb9cbf855957d2d00e060bd0a0 *man/read_cifti_convert.Rd
ae3c2a5f49d13a30f991febb943a6692 *man/read_cifti_flat.Rd
2d224fa332545a68250050aaa0925df6 *man/read_cifti_separate.Rd
e84432162aac14283c37d3d8fb7c56fc *man/read_dir_Param_separated.Rd
feb051ceb8c8486b552002d9fda08442 *man/read_surf.Rd
421ba95fbde58d3eb5db6d4886a9da40 *man/read_xifti2.Rd
595730413a0d482fd70e71c618b1e791 *man/remove_xifti.Rd
ffb4027e81a33e6437faa00de544d0fe *man/resamp_area_Param.Rd
0afc2d49cdf2c821e8849c22ae6c5767 *man/resamp_area_noOG_Param.Rd
8df1a7ecba33b11112cdbd8a700687f4 *man/resamp_method_Param.Rd
e7a210454583829271145ac055736ae9 *man/resamp_res_Param_optional.Rd
5f04b2709e237f479e25a25071de0acf *man/resamp_res_Param_required.Rd
07cd0af119643bfee2e2cbac761d5798 *man/resample_cifti.Rd
d6fbc139075f2c7fcb70b205bafc2319 *man/resample_cifti_components.Rd
28d4850ea038bff8818cc506542d2d47 *man/resample_cifti_default_fname.Rd
51859c16f41263dd7a40a76458ed335e *man/resample_cifti_from_template.Rd
907735e719f8987ad32dfe4798b5d165 *man/resample_cifti_wrapper.Rd
6be94b36650dd6294fca63d011f2068a *man/resample_gifti.Rd
0324474f04b82adfa3f7dc8c7ed501ce *man/resample_surf.Rd
4cc2636bd9e827260874cc933e89b44b *man/rgl_interactive_plots_Description.Rd
3c58a761a1362253a9ee09256bb32aa0 *man/rgl_static_plots_Description.Rd
122da644148a11134056a7a43bec325f *man/rotate_surf.Rd
ebbe61d93e821f9d1b4893051270f8d3 *man/roxygen/meta.R
63bccf000f96a42b5fe81d25df1369b8 *man/run_wb_cmd.Rd
9c8806b774ff52c427ec59746b7edbac *man/scale_xifti.Rd
c2cc204dd876166674e8182c079530e4 *man/select_xifti.Rd
7b39b5125a2f2443e3315de14581d421 *man/separate_cifti.Rd
080286a71e1181f1701a3452229e3bd3 *man/separate_cifti_files.Rd
b31831172ed6edcd50ce6be698383d4d *man/separate_cifti_wrapper.Rd
1750c35aabe2a8374217a7e4910c1724 *man/set_names_xifti.Rd
7fae89275bc7377005cde5b74ebdade9 *man/smooth_cifti.Rd
a1f88183cdd2202d09658d4864f2c379 *man/smooth_gifti.Rd
31cd4ebffe7b20c1e04ab9377c018ddb *man/substructure_table.Rd
0836437b09dde2d94519f11a807330d8 *man/summary.surf.Rd
71dc1640a681f31e0362f797c2a61f93 *man/summary.xifti.Rd
a22d476c463ca1ac71ac290fdee28fc7 *man/supported_intents.Rd
241f8c4305f8d5248a3fb9d42d2826c4 *man/surfL_Param_optional.Rd
57a3fdc64165a4afa1c6581964166aa0 *man/surfL_fname_Param.Rd
260959be030fd82269649c9f366eebc7 *man/surfL_original_fname_Param.Rd
a548561a36887b2d42e5eff089303340 *man/surfL_target_fname_Param.Rd
f03b0acdeca82aa2f0913d2d8d250df4 *man/surfR_Param_optional.Rd
c25ad8fe4f6843892576fa5eca380c5a *man/surfR_fname_Param.Rd
97e513e58a136a502c10fc6d6909f78f *man/surfR_original_fname_Param.Rd
0b03f5826f136ab15ed42a1ee85a275a *man/surfR_target_fname_Param.Rd
ab05afad9872c1a5a10483b9907e950c *man/surface_plot_Params.Rd
416d8951c4b2c76633ade60f1f161f8a *man/sys_path.Rd
35775351c8f7b2afe67d0522137b902e *man/template_xifti.Rd
e3d1d0e16c0089f9c7b0c6b6b0e1e277 *man/transform_xifti.Rd
4d267cccefa8ac7b35961a8466907ea2 *man/unmask_cortex.Rd
25b5729bed763113ca86cc75e03cd346 *man/unmask_subcortex.Rd
4d64304cf46e88092704c0b4d2e25961 *man/use_color_pal.Rd
81ac69d7b31383107e311e9614c5e550 *man/verbose_Param_FALSE.Rd
9129067d0595a7956356e299d86e8c6d *man/verbose_Param_TRUE.Rd
0ba778f0d46b15eee76d4187d4a7779b *man/vert_adjacency.Rd
0c902f10cc3fd639b86ad0bce7abb717 *man/vertices_Param.Rd
fc0709f9ab67ef42b4b31130cc2334d8 *man/view_comp.Rd
e07b87d9c2e1f02051c3ced7de1482c2 *man/view_surf.Rd
1e14f7eac0acc80eb29472d13d3bb010 *man/view_xifti.Rd
1caa4976c844b15b4e84ba8e5dade6a9 *man/view_xifti.cbar.Rd
d609e0cb33df9b375e91c2a52a9290c5 *man/view_xifti.cleg.Rd
495d94a8d458f76c7d63d766e0108c7c *man/view_xifti.title.Rd
a7d27a96ad565d2415f75ba18afccffa *man/view_xifti_surface.Rd
21e9252522fe6c958a4eacd0938179e7 *man/view_xifti_surface.color.Rd
691de18c70a4d84fecc759bce994b138 *man/view_xifti_surface.draw_mesh.Rd
8e34822406de7ed63e1f0fd17856c46f *man/view_xifti_surface.draw_title.Rd
3b467e084acd5ee19d6685b078ae122c *man/view_xifti_surface.mesh_val.Rd
1f03a1f3d95b3a18acfa0f99a452edc8 *man/view_xifti_surface.surf_hemi.Rd
9d7aed4ed0c4a1dc27d99bbd0c6e4b9f *man/view_xifti_volume.Rd
f94a133140904ae963fc3c6cfa23b029 *man/vox_locations.Rd
d09751c59c965e0f3821b0ba10275ebd *man/wb_path_request.Rd
6e55c8f065cdd9fcc39a3ac6563711a3 *man/welcome_msg.Rd
a80a4c278357d91d941f8aade1e81b71 *man/write_cifti.Rd
3f1c6c1de80ec85cc923514c1ef70e03 *man/write_cifti_from_separate.Rd
3bd0b4ccad175af737bb3b77ad0d2ec5 *man/write_dir_Param_generic.Rd
6050f43dfdbe93ce4d40f0d1e4d76342 *man/write_label_table.Rd
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