952ba405b0daa05c2f84d2725512370b *DESCRIPTION
ac1dc66f161723e60beda93c99e74b41 *NAMESPACE
e872c1e064279377ea65742dd0a05c7a *R/aggregate.R
507edf928f564d42aab3a4a2516ef60b *R/chains.R
bd9d4e6cc90a39be05c1917600f33b39 *R/community.R
db9005288daf57b5fd781cd1c02d5e49 *R/community_MN.R
005b8aa6a0ce833370767b1640361e36 *R/community_collection.R
ea1dcf8f5f7828429f69f5552d6f4c8b *R/community_trophic_links.R
8574072b82d0644ec1ca115276c6c77d *R/graph.R
aae057992986cbf859b6d860d7c43623 *R/graph_nodes.R
75f8dc7ab1a15befca0935112098605e *R/graph_trophic_links.R
429b7e70a7c9eb22af149d46f8b3b2d9 *R/graph_util.R
4b8a4921c12a8c1e86a7ffe7f7f10b0c *R/util.R
208616b32cbe5f0b090c2b17bb27d78c *data/Benguela.RData
468c0610fc3e62501895f09c6c89577a *data/BroadstoneStream.RData
20a56c0d53c0f759f2f4f14822d75e8d *data/Millstream.RData
2e455a6f806432f458acd286487d57b0 *data/SkipwithPond.RData
baafb4e5697b15292a8164a163c7de1e *data/TL84.RData
6b3446ffda588373b96a9ae261ea2736 *data/TL86.RData
bdfbb1857585ccbc692a5086ca18122b *data/YthanEstuary.RData
548500ed3694d3038b20f84be4dcd708 *data/pHWebs.RData
8d77c60b707230823578fa889a066e57 *inst/doc/CheddarQuickstart.Rnw
7379d1f529ab81c44f3dde665e0f12cc *inst/doc/CheddarQuickstart.pdf
f8282a11ead6d7bc9b0a0568f9433c27 *inst/doc/Collections.Rnw
b250a14082ddae110604baa28372cc22 *inst/doc/Collections.pdf
bf7387f12886ac641666d0a3bcc7119b *inst/doc/Community.Rnw
4c3996d4dcd89b2cf4f0ef4a548271b2 *inst/doc/Community.pdf
57f768b5822188988d0481d9cddd4158 *inst/doc/Grassland1994/communities/Plot1/nodes.csv
60f8b34a837e78a964c08f5f9a835f4f *inst/doc/Grassland1994/communities/Plot1/properties.csv
fd02632017a4ce0d77a69bb3df172104 *inst/doc/Grassland1994/communities/Plot1/trophic.links.csv
36d180b4b03a5e64f25e031f37153768 *inst/doc/Grassland1994/communities/Plot2/nodes.csv
a0b447a101fb2c66a76990b6cd66e0bd *inst/doc/Grassland1994/communities/Plot2/properties.csv
91154b462e7b566a81aa747398b68c2b *inst/doc/Grassland1994/communities/Plot2/trophic.links.csv
5aca1088752581cdcde5593ee2ece81e *inst/doc/Grassland1994/communities/Plot3/nodes.csv
1721aeb609d8d28ab5e3de6cfb8c7f0d *inst/doc/Grassland1994/communities/Plot3/properties.csv
070b66dfca0bd6d13bb51c3c1f6c4179 *inst/doc/Grassland1994/communities/Plot3/trophic.links.csv
c9432f488885b7408e131217e65073ac *inst/doc/ImportExport.Rnw
413877f381baba516b86a25df52a4c18 *inst/doc/ImportExport.pdf
1e760e849e495b69960270a67c77475a *inst/doc/PlotsAndStats.Rnw
7bc9253481327b87fbea8952eac9760a *inst/doc/PlotsAndStats.pdf
4b36655ddb1f3a5aefab914462e9a635 *inst/doc/Stream12/nodes.csv
81c47de836c416e332afb743f798a01e *inst/doc/Stream12/properties.csv
927ed9fc37a1f8ad580149ac279aa1a8 *inst/doc/Stream12/trophic.links.csv
de89ec800ae8388cc55f23ef691a733f *inst/doc/cheddar.bib
3403ef35819dbdd306752514c7ec2b00 *man/AggregateCommunities.Rd
c5cf3dfeca62a5a7d7530018214d1c05 *man/ApplyByClass.Rd
88d6c8968ed7bf365966a757c757f36b *man/Benguela.Rd
72249dd306262599beeb76a51c51264b *man/BodyMassB.Rd
237a79add6619b45a7a5bc037cce4433 *man/BroadstoneStream.Rd
6d0b61831a33fad66a955c003d4a4626 *man/CP.Rd
697d8c78cdc7dd0ed63006918853d34d *man/CPS.Rd
69eeba95e089e06f29922941a5f2623f *man/Chains.Rd
4b8f2f79b08f1bae92c638ea9063423c *man/CollectionApply.Rd
b14e171020b658004dacd35b11c3f0b3 *man/CollectionCPS.Rd
6bc8d98eac46b0d4274e25b42236b863 *man/CollectionNPS.Rd
14f30605ab5eeb96162ec870db5528f8 *man/CollectionTLPS.Rd
880b59b483d1e249ffd117dc52efd91e *man/Community.Rd
5604375427cf6d913d9233e7ebae9f9d *man/CommunityCollection.Rd
156d814bd03356fa91b6dd0f7821cd98 *man/CommunityHas.Rd
43640816994c9e5f3497d68f1a9ab449 *man/CommunityPropertyNames.Rd
4fb76cba697e4ede397d73c05b793824 *man/Degree.Rd
7cd28a2349ff2cb61da0e8b1cc4e26a5 *man/DegreeDistribution.Rd
c5257bc256435eb610a8408010478380 *man/Intervality.Rd
980663e40707023b0236227e6c3dd8f2 *man/IsCannibal.Rd
b193347700f621042e5e5f375f9b9a4f *man/LinearRegressionByClass.Rd
5bc78ae015e6891e9c95bb810189853e *man/LoadCollection.Rd
73a1441029ea91ecd26129cc219aed03 *man/LoadCommunity.Rd
8f392a6dd25001104bd048641a29d3a6 *man/LumpNodes.Rd
0632f6cd9a8c73e41e8e34aecdb5cca5 *man/LumpTrophicSpecies.Rd
a3a8013f6455c1f5166fe6eaab5f4333 *man/Millstream.Rd
b5484164889532a187150f1caa001c81 *man/NP.Rd
426317d32126104d5b5153d45beb4289 *man/NPS.Rd
5f5a3cbac68343628b92fe4254ac68d0 *man/NodeConnectivity.Rd
f254a0eeeba4b47a4faf795881358b02 *man/NodeMNUtilities.Rd
bfd1a71a24c25f792a2b4bbc6a244d36 *man/NodeNameIndices.Rd
9cc41de9404d55bbbf62a1d6e4ffce9e *man/NodePropertyNames.Rd
64b27d87d026ed0062140e3db749de96 *man/NumberOfNodes.Rd
39a65e737750b702555675668da7c5d4 *man/NumberOfTrophicLinks.Rd
04de6fdcf7f01fe9fba0ec6c222e22d9 *man/NvMLinearRegressions.Rd
cc32a442bb4ec31ae8837676167fd146 *man/NvMTriTrophicStatistics.Rd
54196b31fb0fc98e224771729b3980c5 *man/OrderCollection.Rd
df5b2f8c4ba53ec668c00d60dd04da44 *man/OrderCommunity.Rd
3fbc37ae87bd2f4dac633e61524bdd1c *man/PlotAuppervAlower.Rd
9eaad14cbf95431c18b40eadbf0d2aff *man/PlotCircularWeb.Rd
183fca93de93959f2b768b91ff43d65e *man/PlotHelpers.Rd
ae93e4843e13da142f37fc01ab77ab7a *man/PlotNPS.Rd
69a4030afa36d4be6eec6050ee20e338 *man/PlotNPSDistribution.Rd
def901880241d6c2b2998dfb006c7bbd *man/PlotPyramid.Rd
bac095333d149fd83d155f2d902a8013 *man/PlotRankNPS.Rd
de1137bd0f7cad798487f9d3f97cd247 *man/PlotSpectrum.Rd
1bb19998c270f8a5674fae5450e04e8b *man/PlotTLPS.Rd
278f3c6557fa6ff6e01cacf540c23568 *man/PlotWebByLevel.Rd
497d55e3e6fe4206263127175449de55 *man/PredationMatrix.Rd
8af5d074863cb980a50f5c959f63154e *man/PredationMatrixToLinks.Rd
5fa38d771856fb16a2ffda02b865da71 *man/RemoveCannibalisticLinks.Rd
5771499121eb48460fb6070763cc174d *man/RemoveIsolatedNodes.Rd
eef0b7fc1b3c5e3d5dd45d0ca4db9982 *man/RemoveNodes.Rd
78d29845356d75042bd91b421b89c927 *man/ResourceLargerThanConsumer.Rd
67781b19052904140994766d756fbafa *man/ResourcesByNode.Rd
aca92f479b0016c3aeb8ab7ed292cb82 *man/ShortestPaths.Rd
3c4b26ef92f2149b4d98cc6c46663b54 *man/SkipwithPond.Rd
9dd1edbeb36918e2fb39e953c6787e74 *man/TL84.Rd
9d3076787b2ea74d89f24a8e8c3ea082 *man/TLP.Rd
f22841b65d55258c1cb60f2dfd28a119 *man/TLPS.Rd
906bb3638016da3ac7bd264afbe43a3d *man/ThreeNodeChains.Rd
73c81853d3f390d03e6c886b72f77084 *man/TrophicChains.Rd
f5e90a4f20eed29e2c2950e2083846d3 *man/TrophicLevels.Rd
e08a4b086382c2c6db60bf33b0c07945 *man/TrophicLinkPropertyNames.Rd
1247f4691de35dac8a9abcab0a01f81b *man/TrophicSpecies.Rd
6e9424581fd7f1fbf48dbc6acf87e8fb *man/YthanEstuary.Rd
699d61d248fb708d2e22cef5934683ee *man/cheddar-package.Rd
21ecca058eb60dbaa378dc0c6cb66879 *man/pHWebs.Rd
5d23d6500d84c42e3857ec9dbe991819 *man/subset.CommunityCollection.Rd
4363a63a83534f8f0fbef0513b6f1108 *src/anneal.cpp
e3ce31504135afbe5d4401386084ad4e *src/cheddar_exception.h
0fa14298d3e78f16b54605161187832d *src/shortest_paths.cpp
0d8cb0a51f645b510afacefae6dc4855 *src/trophic_chains.cpp
d41d8cd98f00b204e9800998ecf8427e *tests/aggregate_test.R
d41d8cd98f00b204e9800998ecf8427e *tests/chains_test.R
19510a398a3711d1d55894c738c275bd *tests/community_MN_test.R
a5eea19cdaf591fc4499f2c84c6aba05 *tests/community_collection_test.R
e1b967a4ba250edd51cf7e6b9f051b48 *tests/community_test.R
d44682426262bde39bdad88b7c9212c6 *tests/community_trophic_links_test.R
b734c40598d792235b2919a9c9d2ecd9 *tests/run_all.R
db0a92124258721861f8352c8f03ee80 *tests/util_test.R
