58239193dc3c592ad5c21d572334f128 *DESCRIPTION
696c824cf2ea976f418528a5e6aa18b3 *NAMESPACE
155a04a11a590b89030e73d95ac5aae6 *NEWS.md
e6c40cbe94617a5e349f7b2da4a0545d *R/Cape.R
afba44d2a000bfaa7b926903e8df3df8 *R/bin_curve.R
5daa5893d55200598b44060474b2e6c3 *R/bin_vector.R
4165c4fd4cb17f74d38fde3caa9c8ffa *R/calc_delta_errors.R
6ccea26ee0ebacf9c8bb04f83d7f7fe2 *R/calc_emp_p.R
7bf1275504ad62f79c351249e0217420 *R/calc_m.R
bb72e40f17f818aff87a0068e47de213 *R/calc_p.R
7328173bd35eb6bc985148117fd29491 *R/cape2mpp.R
25d6ab8cad1045431f295fd7e7f48caa *R/center_std.R
d6c05065c7ec179c6b832cef407a3e59 *R/check_bad_markers.R
5b3a4f93fe5aa22fc73aeb8b6a4e6296 *R/check_communities.R
e2cce3c9505c694389775fb6dcf5b091 *R/check_geno.R
bc359c07c33004d75cf4e292fe608389 *R/check_underscore.R
8fa33cbf9a68ad3cb19f666bd10c1020 *R/chunkV.R
94e79e82b655825f87f2ea93a75538bf *R/colors_from_values.R
6fb96892a28eb6b69e6904caf3b36166 *R/compare_markers.R
d5ccb5002491aa85b7c7d5d2331197c7 *R/consec_pairs.R
310e454af5d6d6ac14213902b7198817 *R/delete_underscore.R
ad3bedb1c4842e057e07cca9db4ecdbb *R/direct_influence.R
50d9d39f7592e3b7645c9b941c080edb *R/draw_pie.R
0ccdab7e5b8dbdb730696c5d6bf7d88c *R/error_prop.R
b949da985be8269be2fb5d0cd5374db3 *R/exp_color_fun.R
af0908aacaa7c500966ae2dc29b1b2c5 *R/flatten_array.R
22c7cb6797adb328ae19a2df93d9a69c *R/genome_wide_threshold_1D.R
cb97441b2b9733aac966ed01b7627904 *R/get_allele_colors.R
998c0994ad649947d4bf7f3ee794be59 *R/get_block_allele.R
258a0a6ce7986efc01f9fd7340a14ae8 *R/get_circle.R
80642679864207349e21963f25951fba *R/get_col_num.R
51c695ed0499af520f6629948e48fadc *R/get_color.R
e6dffe2704f18620859955292b2a0952 *R/get_color2.R
3a840bf71d675a3c307fa7d79424e4cb *R/get_concent_circ.R
2ac446e9da66fb6534093ad28fc1e82d *R/get_covar.R
149e6d6071c7101a6072ac768613b3b9 *R/get_eigentraits.R
451c714eae5c47fb6d18b8fa1f0177ea *R/get_geno.R
59ad69a444cd6d3ea05e6c7d050b2157 *R/get_geno_dim.R
85c8fe8468e0f9bc351d0cea0ce1acd2 *R/get_geno_with_covar.R
506ce6c4a81b1e0f2f8a65e0c85a6f7b *R/get_interaction_error.R
15ffd1dd441c2e4842fe9030daae0cb6 *R/get_layout_mat.R
b7426dc755719f729b146a6fde3bfe03 *R/get_line.R
60f91f85be5ddb07b017de09a6f0e4b9 *R/get_linearly_independent.R
88933d56596f0dcdd175ef4a58087eb9 *R/get_marker_chr.R
f24f505ed0f0584aa1cb81ef1e1f4147 *R/get_marker_covar.R
0253d365bfab6024a64e48980767ec59 *R/get_marker_idx.R
73ff3a75cb1a4c4fcac620d851c31e25 *R/get_marker_location.R
7a0260ae5734f06577faec78d0a765e9 *R/get_marker_name.R
4ea8470a8907b3c539ef460e482a8a47 *R/get_marker_num.R
dcfd4adc884af9a88b1dad636e2930c9 *R/get_network.R
e06ab7ed3442fed59aa5c3242b21bb5b *R/get_pairs_for_pairscan.R
a6be03ada24294b1ebe6c169818b1850 *R/get_pheno.R
40b15d993d931dd0d7a4e03d541615db *R/get_stats_multiallele.R
a4abee4c9c29271391bab420060f7fbc *R/hist_pheno.R
77da74b8b934e19f7e51e6c0a6ef50a3 *R/image_with_text.R
1a8c673726c49c9d16ccc52a4c48ff3b *R/impute_missing_geno.R
365d9b3c9b648248cbbecbffb6ea84f6 *R/kin_adjust.R
5e6007aca72dd899d46da35912c319d5 *R/kinship.R
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4e49ca7a8fd1b36d15fdc4bf0c846ca4 *R/pairscan_noKin.R
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916e3f7fc4058fbc925356e5c008910c *R/remove_unused_markers.R
318479fe591501db36f0b679a02dc8db *R/report_progress.R
930aad89902d5a224cd015241c57fe62 *R/rotate_mat.R
f5a2658ed2a0d5f24e0e354802b70840 *R/run_cape.R
2c8aeb5e9770723fd55d26d1deffbc0f *R/rz_transform.R
a0056407848bbd4ec18a748faee0512f *R/segment_region.R
638a2ba3af5a7b3d0c7a9b29258e0b71 *R/select_eigentraits.R
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bb251e3ea55e15945e3b5205397ef2f1 *R/singlescan.R
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79f9a3c6bfda2fc61232731ba3fe80c1 *R/write_population.R
5448f44c8569ca02c18ea3040c40f930 *R/write_variant_influences.R
8e6b49c010c6e145c4bf8e80609555d2 *README.md
fa3590d9645ad9b959ed72a3381b1096 *build/vignette.rds
9e4518063446c019ceb79ef79689ac21 *demo/00Index
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41e90b8f160e49947460ebfd5fa6d4aa *man/kin_adjust.Rd
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