1b7145e10e08fd423f53ebebc9741b58 *DESCRIPTION
99262e3ea2f0370a70469556164f70a4 *NAMESPACE
c98413993a5f975d09247d1fdf5d18ea *R/calc.delta.errors.R
ca6fb08f2dc5c65e20b73ce26e6a2b01 *R/calc.p.R
bf5bac680e43749ba56b21ce66bd935a *R/consec.pairs.R
01cd16226d26b8b6a93e806bc5b29ca7 *R/create.covar.R
a791b479de0567adc84d6f01ec47aa69 *R/delete.pheno.R
2838f94a4e7319de499e81a15efaf4c6 *R/direct.influence.R
68938a01f14126a58808566463b2121c *R/error.prop.R
5b87eb8cd13635f60fa96e72c475348b *R/genome.wide.threshold.1D.R
802ff5cb6183fa89d7d653db893b8d10 *R/get.col.num.R
9a7d45dcbd1c14215cf88d0ffbe0465f *R/get.covar.R
c2d6824c5ccb494d889f3585cd21945f *R/get.eigentraits.R
206dee3252108e8500cc9f8539e031e4 *R/get.layout.mat.R
8885a6dd2bb81c58a78816f0a603f343 *R/get.linearly.independent.R
e955d737456f858202c72e4e0621ba29 *R/get.network.R
57c9b440596f7efb9d6fd72546b417d8 *R/get.pairs.for.pairscan.R
a1282159a2a2fe571aae1ea6e934b89b *R/linkage.blocks.stepwise.R
bf222d30ced49841ed3f7545b13f739d *R/myImagePlot.R
82a6dccfb04cbb5cfa9a39dd1dedf4cc *R/norm.pheno.R
5b0c0f5456224c988d7930601ed76a39 *R/one.pairscan.R
baeab0a4bd286f15740a0e34b37bf294 *R/one.singlescan.R
bfd44b1ba6bc47a1ad93c5d19780da80 *R/pair.matrix.R
11afc85c8a1f221c6b2547517ed433b5 *R/pairscan.R
dc0fe6c1a7c3f492517f5e62763c9c89 *R/pairscan.null.R
bacebff74d86cef860d55ae3d3d89eff *R/plotCollapsedVarInf.R
bf4b3c3a86d008e854842b0fbc768705 *R/plotNetwork.R
60dd9f507f2e702e7cd17745d9a82d3c *R/plotPairscan.R
9169302e0586282714af32af6a31fde0 *R/plotSVD.R
03475426ce07415c9b82e6d20802eac4 *R/plotSinglescan.R
de3978915d0947b2e819d01cc19b13d9 *R/plotSinglescan.heat.R
423d69cfff0640394b23897c645aeded *R/plotVariantInfluences.R
030aaca163e19ae715fb31196e4c2e5f *R/read.population.R
31940097c6e723c53d4295a453c6cde9 *R/remove.ind.with.missing.pheno.R
eb8946fc2c2b2225b0d1d27c8cfb4ab7 *R/report.progress.R
b8ab7d5aa5abbcd59a91452e8adeca37 *R/rotate.mat.R
68177759f8d641f8ca3a63567ce96f88 *R/rz.transform.R
1a16b27d9f0be331a5dc6a1e800d603c *R/segment.region.R
792ab07d773b08ebca52b1c4ffcdf95e *R/select.by.chr.R
f469e9deeb6fa06c347e303931a190b1 *R/select.by.ind.R
71fa1dd06a229ed84ab0ebeb55d90511 *R/select.eigentraits.R
c9fec4d973b32d4a4e23a4dad7d639d1 *R/select.markers.for.pairscan.R
f9d8f81701a1ec87bf0b92ab3e58c278 *R/select.pheno.R
9316e002b6336be59a1fb19c71c02767 *R/set.covar.R
48be63acddde16d6040302d56ced0cea *R/set.pairscan.thresh.R
9b96a9b018e0cc1c2062ff369760ea36 *R/singlescan.R
a36c67ae83469feeff5316bbe1707a0c *R/writePopulation.R
a1a704cc06e0b14e090923973f9a2957 *R/writeVariantInfluences.R
fc3f688b8bcd59de59dfe3df7006ed88 *build/vignette.rds
517229617807167ba33e267aeff40341 *data/obesity.cross.rda
836f71086322273ca42d8bbbbe7ff465 *inst/doc/cape.R
8a78a05eeb2d299601dc3bb6c66a6cd1 *inst/doc/cape.Rnw
ad457ce8a99007416dcb63a3c898e3ba *inst/doc/cape.pdf
99cf307724b5154827f4c550df695499 *man/calc.delta.errors.Rd
81cee841954111b48837e52297b4ebc4 *man/calc.p.Rd
1e8dde053d682ff81dcd8b7cb099a02f *man/cape-package.Rd
1abe3a74f95bfaaf6d24ab7f229af4ce *man/consec.pairs.Rd
63797d6511e3257b933f41899386a58a *man/create.covar.Rd
8c6bb38917e1ad7c675f59897915ec49 *man/delete.pheno.Rd
07d0b0fd600b62242e13d9c301e28155 *man/direct.influence.Rd
474e94f9c9f49a693983754a0eaa2434 *man/error.prop.Rd
0e11104c124a3b77bcb26e1277360f7c *man/genome.wide.threshold.1D.Rd
69e50dc468367b5116cc9f814b24d53c *man/get.col.num.Rd
476ebc17492f8721d36a2fa4b1049425 *man/get.covar.Rd
55cf6865bf832c49516693977833ab17 *man/get.eigentraits.Rd
5c0303c22914f33781018d45ff32f842 *man/get.layout.mat.Rd
c3217d2c2ad2a7d8701f4fcbdb501419 *man/get.linearly.independent.Rd
a14b9e4dce1d309b182b610e714ad8be *man/get.network.Rd
b4db0ad4d6504937548ec34a40b91133 *man/get.pairs.for.pairscan.Rd
10ace96fea1cd4f059e942af607b3ba2 *man/linkage.blocks.stepwise.Rd
64830d04a8ed8b8d40786fb2cca2cf71 *man/myImagePlot.Rd
1e2f1a6c6314543382a45f96be73a567 *man/norm.pheno.Rd
47ca416232c90649732a00c299fec037 *man/obesity.cross.Rd
429b8eaae7e0b44b5c96fe599472e388 *man/one.pairscan.Rd
83c605c96d3031164444c19f4128626d *man/one.singlescan.Rd
0f244e5e259f7b653652b3983d268e25 *man/pair.matrix.Rd
a892089fb3ab8c75e869da73700c1f24 *man/pairscan.Rd
28722d6f67855e5e8d29c8116e185843 *man/pairscan.null.Rd
949e926a4757df2de5096ed3e557ae1d *man/plotCollapsedVarInf.Rd
ee15fb7ce06638f053cb302bff786a9b *man/plotNetwork.Rd
39af55bf6d7dc1c2ef60f1176596b610 *man/plotPairscan.Rd
0f91f5abe24297d96881a0af9440a207 *man/plotSVD.Rd
2fdc27c7f32685e171cba16aaac8833d *man/plotSinglescan.Rd
17738fb4388d9d70b8d5ba7b904da93f *man/plotSinglescan.heat.Rd
1ce51abcb8cdcaf10abd413a6f4d6faa *man/plotVariantInfluences.Rd
9d3f9ffdb126d85e425c32ac2b1b10c1 *man/read.population.Rd
4a52273b0affabf1e80fa7e37c0a8a07 *man/remove.ind.with.missing.pheno.Rd
c3eef3378e08fce8fc22ef95594a680f *man/report.progress.Rd
be2dc638b7814857092dadf12c17e72e *man/rotate.mat.Rd
3ebb30c09f4dcb86f76ad015e68379cc *man/rz.transform.Rd
e50ca3d317ebf6c2c58399c0b902b9bb *man/segment.region.Rd
d5b872531b1eef0d890b5c9063e56fb0 *man/select.by.chr.Rd
0af0a1dba46d50a86bd1b61847ca8f92 *man/select.by.ind.Rd
497e7d412e1686783b7bbcbdc000a557 *man/select.eigentraits.Rd
5e2798ac2c8af9cb53332b36726b0abd *man/select.markers.for.pairscan.Rd
14a624f6bff5dbf9356a3c29fca11ebb *man/select.pheno.Rd
0d54f761f934b4b4eeee0db3006381c9 *man/set.covar.Rd
c24169673ed6c1aa0e654a2c08955774 *man/set.pairscan.thresh.Rd
23e9ce5a2ee2019f292b1b14ef376bc6 *man/singlescan.Rd
90c05bec7942cdcc7828b3f9753a9447 *man/writePopulation.Rd
cc03d931aa147296bdf132f3df95b52a *man/writeVariantInfluences.Rd
caafcc415a2a2a17abe4226ce6d44db5 *vignettes/Network_Collapsed.pdf
0ee488b10a65cdf01f7732878561b2b6 *vignettes/Network_Full.pdf
8a78a05eeb2d299601dc3bb6c66a6cd1 *vignettes/cape.Rnw
e65f1de2a9f1f4f1f4f9b41ed57e2f94 *vignettes/cape.bib
62582a2aa14d7873d6f136d844e77a34 *vignettes/interaction_fig.pdf
9ea05785c030ebc8d39cf1c194c463f8 *vignettes/pair_regression.pdf
ef950fd963f16db8876d4126395f8c83 *vignettes/reparam.pdf
4ba5fd81816258513115819895e9869c *vignettes/svd.pdf
8ec716fddfa8510ae5572612347acb85 *vignettes/variant_influences.pdf
