14a6268f2b3b18ca6bf7c1522e2d643b *DESCRIPTION
e351ee0e09586a070c0e9562e1d6927d *NAMESPACE
f49e43e6dd62db56c0a81dd5bb66765e *NEWS
dae76f490d690fbf818f1458548fc5fc *R/AllGenerics.R
15453f1cb5371213076a546cfab93880 *R/SEIR.R
e63041f2338b5a739108a9c2ba3fbbdd *R/SIR.R
b2983a2129078d20dc016cacdfaaa3d5 *R/SISe.R
3384e06d7ba36a8e7df6d9eaaaee7262 *R/SISe3.R
530ad635c9ae1315c4131799deb739e7 *R/SISe3_sp.R
e1fa8eb233f441e07c3c118792c1c629 *R/SISe_sp.R
3f8e48844ab888b2e7064a45482de37e *R/SimInf.R
54dfec51300434631bf4cf2c3fcf36f2 *R/SimInf_events.R
e7163e8f57d3e7d5a9c9c957a8310e31 *R/SimInf_model.R
88a24493317d0a721fd5fb56e8db7054 *R/check_arguments.R
7b15ee518ab27d4eeeb3be0b59ff76fe *R/distance.R
35e9407862e94f5a1a32e4bcfca94653 *R/model_builder.R
0d1cafa1008e578cbcfd7fa9e5a203cd *R/package_skeleton.R
99dd9364285ebc35b2352fbd48156eea *R/run_outer.R
ded2b492346da8348885a087e3df763f *build/vignette.rds
0d434394e2a8452b2f82b919202433ef *cleanup
87a88dbe3610b7b7dc36192c6126eed4 *cleanup.win
d1ddf1025f779b808a948e42051104b9 *configure
bebea56068132034e9c2b7d2d2f26afb *configure.ac
e35cced877cf743a4d03860a63e2d387 *configure.win
7ac557b41e5224fd954cdac70759bf6c *data/datalist
ecca23e39a9ddac0b09a67d6e086c146 *data/events_SISe3.rda
ff4c69bfaa0057b4469c8784f825f329 *data/nodes.rda
25fd46ad094359f08eb7c3678455b515 *data/u0_SISe3.rda
03faa169ee5105aa11739385702d8c82 *inst/CITATION
a01147edc68a7cfa4293e74c5270208e *inst/doc/SimInf.R
4853db83e5dbc2fd41aaceb1bc7278cd *inst/doc/SimInf.Rnw
0239dea61673471f79d397722aae452e *inst/doc/SimInf.pdf
e5c07b1c86798b32a56a9f10218d7523 *inst/include/SimInf.h
1e86d077e218c848a4b1dd29b2373835 *man/C_code-methods.Rd
c76d84218a049adb5afff83c6f9bfed8 *man/SEIR-class.Rd
4b39bd4a609ed96d0683a47bae01599d *man/SEIR.Rd
ab0fa841444997b6e4dfc1ad3ebd4f18 *man/SIR-class.Rd
8ebe2d655cba937a1d45adf2984c43f9 *man/SIR.Rd
f45f50609e91e25cdefcd9af54994751 *man/SISe-class.Rd
7eb73479b03e2f38fed4bf50c52124c5 *man/SISe.Rd
9d24c462901ecd53bec33bda7a54ac76 *man/SISe3-class.Rd
6bf14aa0d06c21022b107b2e278fb1cb *man/SISe3.Rd
56c2fc86274eef000acb8b86efcd2e74 *man/SISe3_sp-class.Rd
4f61b0e4a96c368d8cb9db22ebfbead5 *man/SISe3_sp.Rd
3d2729f080829c708db9876b986765f5 *man/SISe_sp-class.Rd
e1c390076c61c7f53b735912b3aad8a2 *man/SISe_sp.Rd
10f140c8ed642e5a9a38b3990c44bd1d *man/SimInf.Rd
868fc8d6692f83c59515eddd70973d78 *man/SimInf_events-class.Rd
5304403884395ca0786b11e84132cc9b *man/SimInf_events.Rd
46b263336220c1895a46844805d328b0 *man/SimInf_model-class.Rd
d0259c36407dd9a8541cf9876774120c *man/SimInf_model.Rd
607f5e91b5f9da4a64db43ad1cfe0cdc *man/SimInf_mparse-class.Rd
3b728abc0676c75849485f0ddd026f8c *man/U-methods.Rd
92e45036de3e8e82dc8c9ca68a02c6c7 *man/U_set-methods.Rd
65cd8388bf2b882463498adda50f5fbd *man/V-methods.Rd
58e9b12fd42272e44bc0157d91689093 *man/V_set-methods.Rd
c24d03d654ac280847824dbef0eec28d *man/boxplot-methods.Rd
c1d8e769fa39e45b19eaab052078f05f *man/check_end_t_arg.Rd
a34103c61f33b77791b7e4a3bfb0e47c *man/check_gdata_arg.Rd
e9b68b756caaa56eecde8661185d94e4 *man/check_infectious_pressure_arg.Rd
302ee8955f5289a44f057fd78cbcf982 *man/check_integer_arg.Rd
c8fb309d682f10534bb102875f7bd5cb *man/distance_matrix.Rd
b8a23bfc8eb26f9702d4919217ef0cd9 *man/events-methods.Rd
09c3f7b2a8e7d9835258342c1295cee4 *man/events_SEIR.Rd
e72237da68e9715f03108407f312c743 *man/events_SIR.Rd
69475b4b19700c59469538fb4c7d00aa *man/events_SISe.Rd
7810b0cb6a8db0e707aef313ab81cba7 *man/events_SISe3.Rd
64c09c45bb50e0ac34649ecccc8088f9 *man/have_openmp.Rd
d7afc28b6bc7b0c9e7eee7d88806f6d8 *man/infected-methods.Rd
b3f0ec375e115516d6d7caffff3aac7b *man/init-methods.Rd
d5ec0cf5ce0075a3b473d84590865d5b *man/is_wholenumber.Rd
a0a534906ec82a3dbf70bbc169e4b40d *man/mparse.Rd
d5ef5f46951e4baddd47d1160682250b *man/nodes.Rd
8c954e7ab3d8b3915b30b9e8e4ec1cac *man/package_skeleton-methods.Rd
2a7138d72404fd9a18d4f97d73411ce2 *man/pairs-methods.Rd
801f280344fc8b451c2856928a0cf65b *man/plot-methods.Rd
0bcf80b104dae09f14cf299fe743834e *man/plot_SimInf_events.Rd
2bb51c541165bda16139c2c9f904567b *man/prevalence-methods.Rd
a912237a680e0ede6e6678d5b15c174b *man/recovered-methods.Rd
af4c14d4b3ecb15dc87e9abe5b04eec4 *man/run-methods.Rd
c26b0d6aa0c36411a08c7e3a091ff944 *man/run_outer-methods.Rd
f32b43d86736f659a94ca2019f5be206 *man/show-SimInf_events-method.Rd
60c5b68199896ed8fcc7dc2aa8e94736 *man/show-SimInf_model-method.Rd
9ef10703e108d39b1bd2002214f4fac2 *man/summary-SimInf_events-method.Rd
0f0eedd262aed1645e3ed37810deca27 *man/summary-SimInf_model-method.Rd
1e3b3ce8911c26ab3762934297b3eac8 *man/susceptible-methods.Rd
d1a69eeddf76c3b09f7e93df98f4bf0d *man/u0_SEIR.Rd
4902bed15dc1653b3aafb958013b4c45 *man/u0_SIR.Rd
bf2167a5124cc72f6ac7d1d7f71f04cd *man/u0_SISe.Rd
d3918f4de0ca767cfe0e232ef37dfdb9 *man/u0_SISe3.Rd
c7514a4baf2c98ea67d9921d8ea4482c *src/Makevars.in
132d851865d8e68cfb6ea67df0b8606a *src/Makevars.win
2f1078b6bd97ffb730a649262a4e04c4 *src/SimInf.c
e5c07b1c86798b32a56a9f10218d7523 *src/SimInf.h
7f39b5fde84a2cd06d781d746bad1017 *src/core/SimInf_solver.c
87fa2a0b010da7bbf5e5018b7f995aa7 *src/core/SimInf_solver.h
db5c0935570d70ce21ebabf7a7d7c225 *src/init.c
bbfb15c307964af620e35749ef5ab530 *src/misc/SimInf_arg.c
9e5897cbcb4458ca85fb85de5ad4962f *src/misc/SimInf_arg.h
5344c96d6de0436023d1fad7f45c9a50 *src/misc/SimInf_forward_euler_linear_decay.c
257f147850fa9c193d7450d4a06c76eb *src/misc/SimInf_forward_euler_linear_decay.h
97201a0dcbc4b971ec4751e977083192 *src/misc/SimInf_ldata.c
de04ae43dee47972a2ca6c392bdb4bae *src/misc/SimInf_ldata.h
07bab9f8ce25e5a22f0bc2c7b53d4620 *src/misc/SimInf_local_spread.c
50823382b6252e6417fc245ef168d771 *src/misc/SimInf_local_spread.h
50034d1e63766770cae6f01d493ed31d *src/models/SEIR.c
c5b3716bee0037944a621340c23e54cd *src/models/SIR.c
d6a939ecc3a95f7cf64c05bb6a61a100 *src/models/SISe.c
2a6f53381cc89876d9755d5df098c1e1 *src/models/SISe3.c
160ed924b62e682fe954606cd45192e3 *src/models/SISe3_sp.c
9cea34ebb304ed9cea3a79ffaa6305ed *src/models/SISe_sp.c
c1c83884bd10c4e9b7e3338f77c5de6f *tests/SEIR.R
8842652886a7a4fab3d2bb32c6b60447 *tests/SIR.R
9c9b1ebad0e3359901b75e17973adf81 *tests/SISe.R
d5219a2b10bd4acefa17e1b2c4f97782 *tests/SISe3.R
759e8826f6c7950a7ff671e4fb486566 *tests/SISe3_sp.R
e326c19e8c1fdc7ef81cb1fcde9a29d6 *tests/SISe_sp.R
5f1099f5adb1768a956c451c4021656b *tests/SimInf.R
cd39ad8183051237dfb471f9d5560cb6 *tests/SimInf_events.R
000274d95e6be6a0720aab41daa4a861 *tests/SimInf_model.R
42e181f1743a03ba26faad8f90441a4f *tests/ldata_sp.R
0aefcf5d965625cb0bdd9a4efc1e1ac7 *tests/measures.R
70edc97a2bdae061f1d97c721d9c6471 *tests/model_builder.R
7784225b193887ed38fbb5c8826db46e *tests/package_skeleton.R
3d4bcf046e4c72b259cbc3f7930b1305 *tests/phi.R
67829f700c0d4f50cb0e6b078d445696 *tests/run_outer.R
beedf47f265f990f011aefd11c695212 *tests/sample_select.R
a8f994b2a887459b1ec4d625e15e561f *tests/sparse.R
4853db83e5dbc2fd41aaceb1bc7278cd *vignettes/SimInf.Rnw
0cafa863c9addcff67fb183e46bf6f74 *vignettes/SimInf.bib
2335b023d465aca7fbb5a85911bd4203 *vignettes/img/SIR.pdf
d1e2fdea2a3e0fd0bae83191ccaff5d0 *vignettes/img/SISe3_sp.pdf
9df192bbfe04492bf2b198c72e1d6eef *vignettes/img/enter.pdf
a8f19254b7236fd8f6968c77c4d085a5 *vignettes/img/exit.pdf
e7f692877f4c347ded81c88eef5448ba *vignettes/img/external-shift.pdf
53763da583832f43463915027f2ae5be *vignettes/img/external.pdf
cfd351d2d3a833bbfbcac7ecfc628dda *vignettes/img/internal.pdf
