392e3929c59aaec1388194804c1e72cf *DESCRIPTION
7d083a00bbf44c263e6bbeca361184b3 *NAMESPACE
3f818ba6e15c61722ea1e26a1c602964 *NEWS
210ec1d808cb3d11e9b06256f51e871d *R/AllGenerics.R
9e3b42290b298fb13b94830b441acd0b *R/SEIR.R
b3e31bcb3964065d47ebfb4b8d905f13 *R/SIR.R
2080b0539f910376a987efa5144a4705 *R/SISe.R
e21d7a581043d0f14e6a83fd675c4955 *R/SISe3.R
48ae95fcdef6f96215872dabf72d32c4 *R/SISe3_sp.R
fa05058e55d11e553db801fab73bee6c *R/SISe_sp.R
422ad51bff3af6db30dcc3bdaf10a9ea *R/SimInf.R
8e898c114fcd4fd0063b66a67c364e95 *R/SimInf_model.R
88a24493317d0a721fd5fb56e8db7054 *R/check_arguments.R
c4361bf096ef1428ade08b5fb5cd1c29 *R/demo_model.R
4acd1f7ab486e2e36e7f2ae6ffaa564b *R/distance.R
23fdd9648cde54e9535507c082152942 *R/model_builder.R
e5423c5047b0e258bb0ff5bd2eaabf6f *R/run_outer.R
b816749af252ca74df015274cc366636 *R/scheduled_events.R
90c9f1605300d2e74cd088125d2fab59 *cleanup
87a88dbe3610b7b7dc36192c6126eed4 *cleanup.win
d1ddf1025f779b808a948e42051104b9 *configure
bebea56068132034e9c2b7d2d2f26afb *configure.ac
e35cced877cf743a4d03860a63e2d387 *configure.win
8b86293750c9216e168fdb7365cd4d9a *data/datalist
ecca23e39a9ddac0b09a67d6e086c146 *data/events_SISe3.rda
25fd46ad094359f08eb7c3678455b515 *data/u0_SISe3.rda
03faa169ee5105aa11739385702d8c82 *inst/CITATION
cc676b5476f09241d999bb93e4c7b44c *inst/include/SimInf.h
c76d84218a049adb5afff83c6f9bfed8 *man/SEIR-class.Rd
8770839d60b2b145e951604547ed99de *man/SEIR.Rd
ab0fa841444997b6e4dfc1ad3ebd4f18 *man/SIR-class.Rd
a5e3d784bf08a3bbaee36e12c907e69d *man/SIR.Rd
f45f50609e91e25cdefcd9af54994751 *man/SISe-class.Rd
fdcf5b69375d3b5fe281d8092a21d53e *man/SISe.Rd
9d24c462901ecd53bec33bda7a54ac76 *man/SISe3-class.Rd
6bf14aa0d06c21022b107b2e278fb1cb *man/SISe3.Rd
56c2fc86274eef000acb8b86efcd2e74 *man/SISe3_sp-class.Rd
4f61b0e4a96c368d8cb9db22ebfbead5 *man/SISe3_sp.Rd
3d2729f080829c708db9876b986765f5 *man/SISe_sp-class.Rd
e1c390076c61c7f53b735912b3aad8a2 *man/SISe_sp.Rd
10f140c8ed642e5a9a38b3990c44bd1d *man/SimInf.Rd
572314d4aa0b4f73fe0f2a598ac244d5 *man/SimInf_model-class.Rd
fe4bb8e0d5d4200e8b5e146fa334a8df *man/SimInf_model.Rd
bcbb2f3b66b8b5458e434ea09dee999c *man/SimInf_mparse-class.Rd
a386b146bb48f32d7bd0483636c521be *man/U-methods.Rd
c1b783dae44e4caff07bad700b02cad7 *man/U_set-methods.Rd
72285a745416b0a3ab6ab205fa769e82 *man/V-methods.Rd
8ea1f41ec4d03098387cb1e7a4e12f8b *man/V_set-methods.Rd
c1d8e769fa39e45b19eaab052078f05f *man/check_end_t_arg.Rd
a34103c61f33b77791b7e4a3bfb0e47c *man/check_gdata_arg.Rd
e9b68b756caaa56eecde8661185d94e4 *man/check_infectious_pressure_arg.Rd
302ee8955f5289a44f057fd78cbcf982 *man/check_integer_arg.Rd
7a7bf478210b63396c8c909813561cab *man/demo_model.Rd
bf007daf4ea03e69ab7edbded7b4c63a *man/distance_matrix.Rd
09c3f7b2a8e7d9835258342c1295cee4 *man/events_SEIR.Rd
e72237da68e9715f03108407f312c743 *man/events_SIR.Rd
6fe03d863c556122f3fa65d56c16e16b *man/events_SISe3.Rd
64c09c45bb50e0ac34649ecccc8088f9 *man/have_openmp.Rd
f15d4dc496fb762eb4279dbb95489edc *man/infected-methods.Rd
f3b51084fe0cbc39689d276e8b87157f *man/init-methods.Rd
dcbb25e5148229210a71c07ab1cae3b8 *man/is_wholenumber.Rd
7447d93590ba673f1875fd82ed582222 *man/mparse.Rd
5c3a4f12cbd850819b38ef9165e4f4be *man/plot-methods.Rd
4406936540fe0804cb9a4a257a49b9ec *man/plot_scheduled_events.Rd
0e767c41d22c99c5a08cf799ff336f29 *man/prevalence-methods.Rd
db5f58fcac45298e18dd6de2e618d4aa *man/recovered-methods.Rd
ee23cb2789a9c4f1222d8dacd3ff7be9 *man/run-methods.Rd
37a59b1c954279f1dff87f8324a5b2b2 *man/run_outer-methods.Rd
c8ac3a6f5f95e0b6f7a34366c7a703d0 *man/scheduled_events-class.Rd
945bc54675ce76d4f04280c95823c404 *man/scheduled_events.Rd
9d91936218dcf118805310a68ed6a19a *man/show-SimInf_model-method.Rd
138c5b1b6345a13bb876a0bfd8dea2c7 *man/show-scheduled_events-method.Rd
0f0eedd262aed1645e3ed37810deca27 *man/summary-SimInf_model-method.Rd
28bdf5331940fe43d21121d5b4b65e50 *man/summary-scheduled_events-method.Rd
6b76e93948f77fa102daa2b27a43c040 *man/susceptible-methods.Rd
d1a69eeddf76c3b09f7e93df98f4bf0d *man/u0_SEIR.Rd
4902bed15dc1653b3aafb958013b4c45 *man/u0_SIR.Rd
319aad22845b695e095cdd340a9110b3 *man/u0_SISe3.Rd
389457eb554187525e92a372c8ac3341 *src/Makevars.in
ba411cbb8f2f623183fe9814e7a9d535 *src/Makevars.win
43bcf8b7f5d7876f5622a4d52d2baf92 *src/SimInf.c
cc676b5476f09241d999bb93e4c7b44c *src/SimInf.h
172e7262b69d9f972bf58e1b57355805 *src/core/siminf_solver.c
b3d7508049b9e83513ceb5342109eecb *src/core/siminf_solver.h
b9ea9ac0db945c4405eebb19d8646fa8 *src/init.c
09ff1770762613ace40d7cf8692ec66d *src/misc/siminf_arg.c
86d3b7cc5d95cfc8dc5d8a4718695f25 *src/misc/siminf_arg.h
84e5e41ea02a74c1dfb163f36322fc53 *src/misc/siminf_forward_euler_linear_decay.c
5202b22a2ea5d0538bb9ffa578c9b1aa *src/misc/siminf_forward_euler_linear_decay.h
453e8054bbc427c22669a004a555e350 *src/misc/siminf_ldata.c
de04ae43dee47972a2ca6c392bdb4bae *src/misc/siminf_ldata.h
4eaae37070dec0e3e78a8c2fe1a41d38 *src/misc/siminf_local_spread.c
24adb3432106604ae50780ecebcf104d *src/misc/siminf_local_spread.h
bf315ac2bb442d9ea5228115592c08c1 *src/models/SEIR.c
3ecc96743df1f8343fb92266ac10056a *src/models/SIR.c
139cb355462853f858f3dc0dbc0a956d *src/models/SISe.c
cf5acf4d759b30f18dff17e77039b424 *src/models/SISe3.c
e3f4422387bbbbc7e3a47aff35a5f067 *src/models/SISe3_sp.c
256c4356b9b4a3d4d9fb929c1b82ea32 *src/models/SISe_sp.c
c1c83884bd10c4e9b7e3338f77c5de6f *tests/SEIR.R
8842652886a7a4fab3d2bb32c6b60447 *tests/SIR.R
4c1fa387598230f18411276bd4b5d5f8 *tests/SISe.R
203878fe115cf218e6f2a9a3108839c8 *tests/SISe3.R
8fac4c5c42dec463c12c496538299fb4 *tests/SISe3_sp.R
2bdb4a91d55e62771d8af423c68a9ad4 *tests/SISe_sp.R
cef06976a495897ef10f00502f902acb *tests/demo_model.R
afe9b9c498987cd50113e529e55b7843 *tests/ldata_sp.R
ea0b45c802844467062d3ce975db796e *tests/measures.R
3d4bcf046e4c72b259cbc3f7930b1305 *tests/phi.R
dd8047ce83c51b74a2341aa4ae1c8cfd *tests/run_outer.R
584359163acde597ce19e201d8a3641d *tests/sample_select.R
8865f19062b673bae96bda1eb82682e3 *tests/scheduled_events.R
6065a8e1704bcc0aa602c23496dfb140 *tests/siminf.R
3f97074f98e2278f214b440c1b9bee9c *tests/siminf_model.R
528448f1c48cc3d03b86046f3ed030b2 *tests/sparse.R
