4b1cfd994e4131adfc8df6c316737967 *DESCRIPTION
ab1dded1d403088486b5a5c36d56222f *NAMESPACE
241b3d7bd6593e513b8e73f6aee8dfa4 *NEWS.md
bdbe9579401a5cf9b100016d865ff5a1 *R/KSoftImpute.R
067f507d9542cefeb88957b67b399026 *R/MASC.R
9cbd891ce98b046d9a9d0455cddbb06e *R/ModelGenerator.R
7cb8c32cbb18c8d61cc6bb8652e1489e *R/Signac.R
4e2014e912ce0b8e12be323c3dd66dde *R/SignacFast.R
213fe874dfd0fa3f12832217cf4edd1b *R/data.R
c37fe67af8c43bc675649cee1d0bca3c *R/helper_functions.R
b8e88c8b8fec64b0652e6d21696ce80a *README.md
3433d60121e842d3caeb234585a4b988 *build/vignette.rds
69abfdb8587c88d2b13c302fd7e5e406 *data/Genes_Of_Interest.rda
b92e427757133f816da7c40590e0c3a5 *inst/CITATION
47808f15d315690865815d2884e2116b *inst/doc/Crabeating_vignette.Rmd
92ada688b71fd736d22b5de922e928aa *inst/doc/Crabeating_vignette.html
9afb4b0bb101feb3e37823e8a07fd69e *inst/doc/SignacFast-Seurat_AMP_RA.Rmd
e6aca46f9ef461a61b001e9d64e21fa2 *inst/doc/SignacFast-Seurat_AMP_RA.html
c4cb0ed9c16684c09f9c5926776483aa *inst/doc/signac-SPRING_Learning.Rmd
eed4cfcc612603250f5c2e129d669133 *inst/doc/signac-SPRING_Learning.html
9b0663dff59724511bbb2797904e0970 *inst/doc/signac-Seurat_AMP.Rmd
98bf52e37c114e582cbc5989c727be70 *inst/doc/signac-Seurat_AMP.html
28a67d313821b88c428f2157a12c59b9 *inst/doc/signac-Seurat_AMP_RA.Rmd
83fc77d293da7215c92ea197194392e3 *inst/doc/signac-Seurat_AMP_RA.html
5c97e9344be8a06f991c111b18bcde9b *inst/doc/signac-Seurat_CITE-seq.Rmd
1babe281fc0500760aebba36a8a24b21 *inst/doc/signac-Seurat_CITE-seq.html
b1dfa3cbaca7d247aa7369b596d67f9f *inst/doc/signac-Seurat_pbmcs.Rmd
61c94305dcad1bf35b2ca2e1e73a1252 *inst/doc/signac-Seurat_pbmcs.html
d3c72c37a7082e607191d382b0701325 *man/CID.GetDistMat.Rd
e463fa95f2d701dffcd421cce2bceab2 *man/CID.IsUnique.Rd
9392a41de8c7960f3b68e6a67cf99043 *man/CID.LoadData.Rd
7f43c49d681ba2c9ef09d7192fa50464 *man/CID.LoadEdges.Rd
e34f88b43fb17b9baf6821776601bc3b *man/CID.Louvain.Rd
fe7dbe93fa84dabfa859acaf5f0e3aba *man/CID.Normalize.Rd
1cbb7a87a0bcef092bdbb7ecbd731350 *man/CID.entropy.Rd
ac8fd4eae8b6b466e213a16cf66ca051 *man/CID.smooth.Rd
0920ddc4d437f8be890cff2f4cacb5e3 *man/CID.writeJSON.Rd
54d3c4a4c766d823de6a27841f3295bc *man/GenerateLabels.Rd
48defb05a3499251283d8302c8965b02 *man/Genes_Of_Interest.Rd
419be05bf917cfaa45180bebe831333e *man/GetModels_HPCA.Rd
b0b8173b1b4f5fbc291fffd4fc18db35 *man/GetTrainingData_HPCA.Rd
3873dc15425af43757b4583bf8b8e3a9 *man/KSoftImpute.Rd
2f0a7587f017e3515ba42613fc46844b *man/MASC.Rd
96d5649370f5278b2ede5cc24a744786 *man/ModelGenerator.Rd
d3ea8c7ef349803eeac5d9a8c32a316c *man/SaveCountsToH5.Rd
bf3af71927c4d3b068fb8a1f947e8e06 *man/Signac.Rd
1d654608e89237727870d8dcf9847542 *man/SignacBoot.Rd
38eeef54789f522147e65652d144a25a *man/SignacFast.Rd
dcd2ea4d224e60ef75729e12150c2a31 *man/get_colors.Rd
47808f15d315690865815d2884e2116b *vignettes/Crabeating_vignette.Rmd
9afb4b0bb101feb3e37823e8a07fd69e *vignettes/SignacFast-Seurat_AMP_RA.Rmd
58c10b6204463fa47d2171e8b43002e7 *vignettes/fls/SingleR_Results.rda
f5dc62fefe15b33bf30eb76d72feea91 *vignettes/fls/amp_kidney_MASC_result.rds
1ae114739e8232f1a99c269d9c0c8016 *vignettes/fls/amp_kidney_celltypes.rds
df3e911b8ca0015e13c628bbbe4f72fa *vignettes/fls/celltypes.rds
92e23c77f7b0f30a560422b94bdf7376 *vignettes/fls/celltypes_amp_synovium.rds
310997ffaf6ce80da2e3bb234fe7eb05 *vignettes/fls/celltypes_amp_synovium_true.rds
e72b76cddc657598d0c91b6c8a2b8868 *vignettes/fls/celltypes_citeseq.rds
ade805ae2826451052ddd9c29d22b048 *vignettes/fls/celltypes_fast.rds
685d7bfe1f6d8d88c5174ab979b2aee9 *vignettes/fls/celltypes_fast_citeseq.rds
65347bb01f30a89d46f17faad803c102 *vignettes/fls/celltypes_fast_synovium_celltypes.rds
4f55edd6121a8fe0d0b6d0dae1128db3 *vignettes/fls/features.tsv.gz
9927b53f0e9479cc0d99f8000f0ce670 *vignettes/fls/orthologs.rds
9c9ed7ad3e7ba714c4a7d7f6b4c6b06f *vignettes/fls/plot1.png
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94818d7bf79fe3ae7dfc743cbe15153b *vignettes/fls/plot2.png
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0ebc551af45f8ef6ff1c6657ebc1d22f *vignettes/fls/plot3.png
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0aec56b5b21b7a441ca4f15a57ab7e26 *vignettes/fls/plot4.png
356a2ce08c2e31b279777e011de108b6 *vignettes/fls/plot4_amp.png
81b11b74ad3126fa15913a2247521d27 *vignettes/fls/plot4_citeseq.png
24b360fc68ae0c0b9cfdad1a41ea4651 *vignettes/fls/plot5.png
d0e08ed41654eba50974b1cc78b0ec8f *vignettes/fls/plot5_citeseq.png
06d97cfe24e623c993f1c8703c52e2be *vignettes/fls/plot6.png
1a0027160091cce853ab42793a4a4352 *vignettes/fls/plot6_citeseq.png
efe073a89875b841e32592d4c0be084d *vignettes/fls/plot7_citeseq.png
4ade8acaa3c9e3417824eefafeab8d94 *vignettes/fls/plot9_citeseq.png
c4cb0ed9c16684c09f9c5926776483aa *vignettes/signac-SPRING_Learning.Rmd
9b0663dff59724511bbb2797904e0970 *vignettes/signac-Seurat_AMP.Rmd
28a67d313821b88c428f2157a12c59b9 *vignettes/signac-Seurat_AMP_RA.Rmd
5c97e9344be8a06f991c111b18bcde9b *vignettes/signac-Seurat_CITE-seq.Rmd
b1dfa3cbaca7d247aa7369b596d67f9f *vignettes/signac-Seurat_pbmcs.Rmd
