7b9d99cbf6cc0c9ede94a2300cb86567 *DESCRIPTION
a0f621aa5ef981d652da4667c41c58fb *NAMESPACE
e88e863ae2faf268913abc4d4b933cab *R/RcppExports.R
a8276721726c2abe539e6a0c2b7d6c51 *R/fastphase.R
6e5181689e3356d40e34343968ab4aff *R/knockoffs.R
227fab1bfb48933afd062a07cd782eb4 *R/models.R
89eb9f686de1876d388c00c5ce046a40 *build/vignette.rds
b27c175b9693d570cfeaeefd9893f881 *inst/doc/SNPknock.R
a71f4f7bf3636726d871db1b962cb040 *inst/doc/SNPknock.Rmd
b19528e0999b3e60e2624a1e41d7571a *inst/doc/SNPknock.html
5bcd199c7ce0b166d0fd76fb89c507ac *inst/extdata/X.RData
c537a1b83a2a1c6359e47d55ee111f16 *inst/extdata/X.inp
ad52dedfa80e7b0bbdc79c39fa143752 *inst/extdata/X_alphahat.txt
95f267011af9550188cad1f2ef20feb7 *inst/extdata/X_origchars
bb800c34dce993214bbab6743577a308 *inst/extdata/X_rhat.txt
a17dbdd5d1f0a27e9106947b7f7a1e27 *inst/extdata/X_thetahat.txt
6bd49232cb6c4658d535321a6c5ba58f *man/SNPknock.fp.loadFit.Rd
0ff760e4dee93fbaf71a0145c77032d6 *man/SNPknock.fp.runFastPhase.Rd
8665aee4513fdb684aae8230c36c8251 *man/SNPknock.fp.writeX.Rd
5d1dc2c5303d998295d89dc89a4b1e01 *man/SNPknock.knockoffDMC.Rd
b3c8e4e1026473c638ee740d6653e6ed *man/SNPknock.knockoffHMM.Rd
22f6159add1619b2aa13ec130d5196a2 *man/SNPknock.models.sampleDMC.Rd
34b8471733eae2f40b0583b17d2cdd71 *man/SNPknock.models.sampleHMM.Rd
3c356bda6a08aa4ebf032bc40f8b118e *man/assemble_Q.Rd
cce639b34d74dc294f21c6ff11943cfb *man/assemble_pEmit.Rd
0f784f9a5da4bf901e717dccd641369d *man/assemble_pInit.Rd
0378392836b6c900eed1af0340a8e17e *man/compute_Q1.Rd
accb2736d741d71f1a2bc5591bafa170 *man/knockoffDMC_wrapper.Rd
e2e3f5647ed99e56f087081e19277401 *man/knockoffHMM_wrapper.Rd
a698277f1d977aa220c1840784ce2968 *man/loadEMParameters.Rd
e4e260e7a8842e1aa89cfca394f9c982 *man/rand_weighted.Rd
e3d3cb360fbfdb3c6974e14eb5f09870 *src/Makevars
4a2dbc1f83743af761a40c00296a6c3f *src/RcppExports.cpp
c2f2cb6769bf80bfc5a620614adbbbfe *src/dmc_knock.cpp
cc87ea6ffba8df3222a2b49fb36708bd *src/dmc_knock.h
22dac386c41fdf29e4607ae4eff547f5 *src/hmm_knock.cpp
67e0dda965a8032e077db3b73dfcf33b *src/hmm_knock.h
b93fff8fb078d449a5d90e44e493cb52 *src/knock_interface.cpp
8eda0a59fe9e08db9e8a5bc253786eac *src/knock_interface.h
74734db2944729dbe6ff87fa55942205 *src/knockoffs.cpp
a3c1f0f73dd57333cde4e920d4e790a3 *src/utils.cpp
e5d2b24c2a42bd18773d48efea392111 *src/utils.h
620be378238bc8ec02541939e0280233 *tests/testthat.R
1cfb66354fe00f78d69ac6b793fbb38c *tests/testthat/helper_test.R
6e4f3613690eba303357ce0535ba52f1 *tests/testthat/test_knockoffs.R
a71f4f7bf3636726d871db1b962cb040 *vignettes/SNPknock.Rmd
2b8b178af3d977c7b24e8fe7642c11e1 *vignettes/genotypes.Rmd
