a4a69e4e265d288284c8931626132de8 *DESCRIPTION
f1d9f7c7ea6b471145656f74538a38c1 *NAMESPACE
f2b4604644ab22daed4fac2726f6a9be *NEWS.md
59032ee1280d547e6c398aae6c937577 *R/Dbf4myc.R
6dcd776f2d931226280152fa5498a264 *R/MFA.R
13462bb7214f633c0a68ab827e1073d2 *R/W303.R
9ae30bf3ae7cc48843e48841f4f01104 *R/W303_G2.R
691be5b53dbce367f40a75121569db9b *R/W303_S.R
ea5b2e504604c044089417f29d22024d *R/W303norm.R
a6eca81d072a479159296a41bfa892dc *R/compareRatios.R
7f58573d0aede55d4f01a74c361a12d8 *R/guide.R
336bdd9554351aba393cfb793b320853 *R/loadBed.R
e77fcc4b2be08869bed77095be95dcef *R/makeGenome.R
0619cc28af4c8ebe0f1bd4e231109cd8 *R/makeLabels.R
aa02eb4000e311a68c05eacb64326aed *R/makeRatio.R
dbbce032deccdfde4947678fc711174b *R/normaliseRatio.R
8f6e136133df91341b6f82342dd7e901 *R/onAttach.R
457f23bcb156bd923f663277e3385531 *R/plotBed.R
f42d90ad114a65f3a46ff71f39e89635 *R/plotCoverage.R
83b11317d86c5f49860daf26ba502662 *R/plotGenome.R
63c57742554eecaa25391aaa3910fc6e *R/plotRatio.R
d6fdf442339bc8e83db155bf74a95ee3 *R/rmChr.R
0136c57f4493a33e0e57da92570a026f *R/rmOutliers.R
017e183cbd589e3a2779988dd6c25e52 *R/runGUI.R
c6582e97c026de9e30f689b05c1902be *R/sacCer3.R
fff9089972fde35dc7f86157fa81705f *R/smothRatio.R
ae377fcfaab0c60e6ed416546eaae195 *R/sortSeq.R
29f457d83b2e946509b30d398ffca818 *R/syncSeq.R
3d2aaec31bc1cb1eb1c42bebf7acbdb8 *R/trimRatio.R
a2778c2e5eb1b488835647554671a4ef *README.md
71adcba6863896e5990e614a76eec6c4 *build/vignette.rds
63f3c3caf689cfe3e6f7aff25f93b214 *data/Dbf4myc.RData
10ed9b06452e31897de416bdc7bace35 *data/MFA.RData
f20c2836a68030da7362799749cd4481 *data/W303.RData
d86158b02b078c3ec570c25acec0c716 *data/W303_G2.RData
6c014d2c63dd2e208790d94702f8e791 *data/W303_S.RData
a8efb6de7cb5d959e382bdc550a2a244 *data/W303norm.RData
4413d3c062f5f9ccbb96f441dc4fe035 *data/guide.RData
3cb6cea4489f3cc62f7796c9dfcc20cb *data/sacCer3.RData
434923ac24175ecf110d2aa9684741b4 *data/sortSeq.RData
8c01b9de9ed42a3ca5c083ba0f1c35f1 *data/syncSeq.RData
90c6253a7f79352e7743dfa71d8039a8 *inst/doc/Repliscope.R
66c68f8daeb84b14376cd932d86093df *inst/doc/Repliscope.Rmd
46cee45622467ae10fe2a60e1b335705 *inst/doc/Repliscope.html
779fd59778805d2d5bd1ec97c006bf94 *inst/extdata/W303_G2.bed
e1554753bd0be64077456075d8479b79 *inst/shinyApp/server.R
bd5d4c4cc386f698822e7d37481fc8ac *inst/shinyApp/ui.R
47f311cb5b226f1dcdb8fe9683cbbb54 *inst/shinyApp/www/Repliscope.css
334a34fbe3d60cfeff534b0bb3fb5ec6 *inst/shinyApp/www/outline.png
b317f0eb72610fc88426ca16b9bc2fe6 *man/Dbf4myc.Rd
9a8b4d1820530eece72b3e4eff24712b *man/MFA.Rd
4e08f635c376d85097513e655f9b4a27 *man/W303.Rd
1ad5fdf61ad28d2f2608aeba5e424104 *man/W303_G2.Rd
dbabf2e363ca4a59fa81e1a3c17a09f9 *man/W303_S.Rd
378947bc903aed6e89fdff1d1f630d29 *man/W303norm.Rd
df083534ae2b9470b873dd45b6de5724 *man/compareRatios.Rd
3029bf2992267b62da36f186c9014b9c *man/guide.Rd
96f729c0060c959d3ad5fb3905e5719b *man/loadBed.Rd
16a92cddfca297b2cc9990460a896962 *man/makeGenome.Rd
98bf57e37dc050f45df88fb0db8aa80c *man/makeLabels.Rd
9a4058f78b9576688857c80de09fbd31 *man/makeRatio.Rd
b80a5545bcdc46d1b3553555c3b40bcd *man/normaliseRatio.Rd
c3937ff57330aff794495b1157314739 *man/plotBed.Rd
4a0d37e86dbbe0538b13298c722844a1 *man/plotCoverage.Rd
6132a4a17ac58893e0d6d5efb9eafef9 *man/plotGenome.Rd
bb9db9c9587388acd8d5ce6856abef1f *man/plotRatio.Rd
23efb4ac63c563afb56b833a6d97ec39 *man/rmChr.Rd
3c23e622fdf7a41160b1166356ed7f78 *man/rmOutliers.Rd
0415cbcee2f39e44986bcbc4fa3111b8 *man/runGUI.Rd
f57d92f4388d8ef72987b6733f81f1af *man/sacCer3.Rd
c1376e56dfddc7434266afcd19bc7130 *man/smoothRatio.Rd
3c3fa61d885724162259e2dee805f0e3 *man/sortSeq.Rd
efc25724529d7f5f5e947163aae50929 *man/syncSeq.Rd
e1c668f750b1b392323c339c94b32f3d *man/trimRatio.Rd
66c68f8daeb84b14376cd932d86093df *vignettes/Repliscope.Rmd
334a34fbe3d60cfeff534b0bb3fb5ec6 *vignettes/flavours.png
ae650bbbed66fe75198dd2a1caf626ce *vignettes/plotBed.png
9962e67337e27034a78899907961fa1a *vignettes/plotCoverage.png
30d9960c08b565804463c3ab54c09a73 *vignettes/plotGenome.png
3c4d1952154f4db6cf9b2c4aebae3c50 *vignettes/plotRatio.png
