db5b39844819adeff036c3856823f8bb *DESCRIPTION
f710ecb23872c7233254854c040fb0b4 *NAMESPACE
261a5cb1c3f99fcf5258fc00581d1782 *R/DataApes.R
010b92b31a817997550d2fff8d6b18cb *R/DataCetaceans.R
cea3aeb7ef747aa571e2c309b99f95a5 *R/DataFelids.R
d182a526e84a62e41a886c4c89d43f5e *R/DataOrnithodirans.R
3c0e43736f7574e5966d51c1bfe8b381 *R/DataUng.R
11dc1744375b6f1fd2c25842fa083a48 *R/PGLS_fossil.R
30afe01ee4882a6e88578bbb05fccd11 *R/RRphylo-package.R
99974b971388721e2969437d0aa02480 *R/RRphylo.R
dd192bdde373fd812bb81f5dad0b28d2 *R/StableTraitsR.R
e58a6efb79a32a5f27ab2dfc7206f7a5 *R/angle.matrix.R
40994cbde40c9cae4b39a63191572616 *R/auxilliary.functions.R
a93856f4a18a3bdb2bc1c44c57d8bbdd *R/cutPhylo.R
2614b592d22f92acc72fe79a641f8501 *R/distNodes.R
918307f0fd40d65f10484dd2857ebfaa *R/evo.dir.R
1c15420c261df1bb4ab2ded7574c1e17 *R/getMommy.R
2c6788a2303054723528bd1c309db812 *R/getSis.R
24b7b67422f473b3956db8e04ca0171f *R/makeFossil.R
5fdec61e87774674900eeaeeb3399857 *R/makeL.R
69bea78bfcaf31dc14567b0354158b43 *R/makeL1.R
963372215fa3c0d52fc8856a9a1cdc10 *R/overfitRR.R
18903ef3f65eccc5a9fa6c6ef65f58eb *R/phyloclust.R
a863b15e326ccae66148b15d79e28733 *R/plotRates.R
2d0b5927f8892168839feffc3ecd14bd *R/retrieve.angles.R
f65bf07b5fc81e4f9420ca19d005c2c2 *R/scaleTree.R
359760d15c0e3591fca66be7f4861420 *R/search.conv.R
5fcaf22cdf976277c8b332959ac51143 *R/search.shift.R
a2ebc6712a277eed6d8e618abf107183 *R/search.trend.R
0e13234268335238ded4858dc735bfc8 *R/setBM.R
9d9f5f66314360357fa94411f4704a8e *R/sizedsubtree.R
e36e960afed85e8864aeb8ab4bc40b42 *R/swap.phylo.R
52de8f959332fc82966d12ff40da840c *R/swapONE.R
a87ca38420c20324db0e7c56f6860382 *README.md
8bf2ad40b49c019139536d14fb49d24e *build/vignette.rds
3c3127f2d5d42c3912d57742f834a285 *data/DataApes.rda
8f95ad61fa098a0312f427dfd081a94d *data/DataCetaceans.rda
fca9800a2683faa2384620e5c1d69467 *data/DataFelids.rda
ca1f8209c9fbef21c62244b04b7dfea2 *data/DataOrnithodirans.rda
5944cb20f016659dfacf56bc485c6c27 *data/DataUng.rda
8804979ccf53d26e611d223d03de8d6e *inst/CITATION
6ce58f6ab5d95c5a7af5b9e7a4e2e87a *inst/doc/RRphylo.R
08747a141cf63eadd54d2f9cc63c5a2d *inst/doc/RRphylo.Rmd
7bd8212d6c7230f7813ab2f8df6d283c *inst/doc/RRphylo.html
102b327e709a3242c63877f595d48928 *inst/doc/overfitRR.R
73ee9d0a9e0719d6a24f9ffb0f1b44d3 *inst/doc/overfitRR.Rmd
4433267634e680f86d52e22c35444be6 *inst/doc/overfitRR.html
95c2f318cf435f2e411101d3d59d3160 *inst/doc/scaleTree.R
1d30037589db42abfa397ec087874f2c *inst/doc/scaleTree.Rmd
3ce34426082c937b26a92693df2ac36b *inst/doc/scaleTree.html
1e79fff39abbf8b6866c2ba959d3c136 *inst/doc/search.conv.R
88071cfb570a7ea2526f3932a5fcc83b *inst/doc/search.conv.Rmd
5ad264102a5027659e47f932823bd914 *inst/doc/search.conv.html
e6c96e5a78c123cd4985584845b3a7fc *inst/doc/search.shift.R
30097c89bff324096294d154dbc6c6cc *inst/doc/search.shift.Rmd
3f7ebe2c112d060e01b284cae6ca56b1 *inst/doc/search.shift.html
441b3966125ba946432ed3f42ecb4a9e *inst/doc/search.trend.R
0f6fc52977d0bfc3e5f00286d43a06dc *inst/doc/search.trend.Rmd
0dda09e5052515fe0838ea2f73f74ec8 *inst/doc/search.trend.html
034e3a1975dbf9b9f4532daa510201d6 *inst/doc/swapONE.R
30bbc64164062a4c0fa480fbfab9045b *inst/doc/swapONE.Rmd
9cdfc7d94aea21eeff40b2cbff41d955 *inst/doc/swapONE.html
cf85045a804de3a4a47e510e331887d1 *man/DataApes.Rd
8a33c48eda456d4fb64cd196831aee46 *man/DataCetaceans.Rd
de67ca56336b6f560839fc0d29526667 *man/DataFelids.Rd
f592999474d4737c21f59575ac556652 *man/DataOrnithodirans.Rd
427d06e83f321e383d0769484de0b08d *man/DataUng.Rd
f3cc2b7f0ccab6b50e44bde71e8d0a62 *man/PGLS_fossil.Rd
4935dfa6a70581b37681134f2647bb21 *man/RRphylo-package.Rd
1a700b525e68052e578671efd04e34b0 *man/RRphylo.Rd
49bad362f5c536eaa1deff9a14383650 *man/StableTraitsR.Rd
b20f26a1bba2858e9de4d41f0b62b610 *man/angle.matrix.Rd
aac945c46a82cd492760f091e80c02d3 *man/cutPhylo.Rd
bc18f45c9d57c19cb6a5b02a3517c00c *man/distNodes.Rd
a8020baf596868d2ba052076aab27967 *man/evo.dir.Rd
ba98737d1850c34e86ff12c28ffcdc35 *man/getMommy.Rd
87899a18538b1d7934f815cec9ac60e9 *man/getSis.Rd
aae4e8bf77e5564046bdbf0a533f96b1 *man/makeFossil.Rd
81913e50f1d7c91185b865fcd568692d *man/makeL.Rd
6a4c51d45eaeafa62532e307d6fde604 *man/makeL1.Rd
7aeefd85106d47d602bf1fe4b7018723 *man/overfitRR.Rd
498bb61484e16213807837e834669e9c *man/phyloclust.Rd
54ab1c675974597a26bc22f8a04b1a62 *man/plotRates.Rd
c463bbfe1974df212b34e1d76fd5b0a3 *man/retrieve.angles.Rd
33d5efb9623c180e5ba3b2e7599844b0 *man/scaleTree.Rd
3cb426a79fa0f8bafec5c812c3646a92 *man/search.conv.Rd
41ec4153652c1e16df159badee52bafc *man/search.shift.Rd
ef73a7ae2be76f57a3554fcc0bcdbefb *man/search.trend.Rd
67a7a6a3b82f3925225ae856c98a7f9f *man/setBM.Rd
031b461db3c0b2ef60df70493f756434 *man/sizedsubtree.Rd
071f3569470da51f7c9065f7e630656b *man/swap.phylo.Rd
783fe573d75605ec9a406e3717526977 *man/swapONE.Rd
08747a141cf63eadd54d2f9cc63c5a2d *vignettes/RRphylo.Rmd
73ee9d0a9e0719d6a24f9ffb0f1b44d3 *vignettes/overfitRR.Rmd
1d30037589db42abfa397ec087874f2c *vignettes/scaleTree.Rmd
88071cfb570a7ea2526f3932a5fcc83b *vignettes/search.conv.Rmd
30097c89bff324096294d154dbc6c6cc *vignettes/search.shift.Rmd
0f6fc52977d0bfc3e5f00286d43a06dc *vignettes/search.trend.Rmd
30bbc64164062a4c0fa480fbfab9045b *vignettes/swapONE.Rmd
