597f6bf9da4241403f9622ed460799ef *DESCRIPTION
1d40a0a6a260f1ce0f5c84e9dc605816 *NAMESPACE
c1ad60da2533da21218af7f75968193f *NEWS
3d35bc5162fe1b325a27e227a740a8fa *R/affine.R
e239adb267ea43cf931447ac81c20875 *R/image.R
269c9037d700f63bd0ef9d737722caad *R/nifti.R
8295eecc45ff8589606df9ae7abe9c41 *R/niftyreg.R
a51f1f07a5ee36921a292478e8aa4c82 *R/transform.R
7ac5fa30c82e205dbbd2cce0c2674b21 *R/zzz.R
032eff5ba3c1e970fe4417976a7fe2ff *README.md
598b4a235a3823de6a49d15315cc3531 *inst/extdata/affine.txt
307db26523b8b03fe4c799fa9e895320 *inst/extdata/control.nii.gz
30c091d208079613a19efc08f87849de *inst/extdata/epi_t2.nii.gz
12850cf4c6d768afd0c8d0daa187c625 *inst/extdata/flash_t1.nii.gz
1d42f430556750774250a3e758baf2b3 *inst/extdata/house.png
aae4dd824a4809d33d90c1e340322ba1 *inst/extdata/house_colour.png
25b02acd13939ef3af06d348d80a54ff *inst/extdata/house_colour_large.jpg
ca3ed70d5f134634e5dab152653b0021 *inst/extdata/mni_brain.nii.gz
4487b6f461cfe608bb96f8beef57c9c0 *man/affine.Rd
2b262dc965392db6d8848d9e025d28fe *man/applyTransform.Rd
ed364b5e25b0f6c8a4dce35430033b1f *man/buildAffine.Rd
260c9fcefb3789418080f219049a2557 *man/composeTransforms.Rd
cf7536cf5fc8806359dfe6a8c3f32a31 *man/decomposeAffine.Rd
496f233e676e8732f40c0c705512e286 *man/deformationField.Rd
f6c5996d55694bf81ca232274cd42170 *man/forward.Rd
22c2aa9b5e1002f3df44fd11ce71a0f7 *man/halfTransform.Rd
bd957b653b8dffcc4af3a29707301c7c *man/invertAffine.Rd
607581c11c60ae2e24f6dc6173d63aab *man/isImage.Rd
ca5a80dea1c66c6ab17a622cea649dad *man/jacobian.Rd
08bff0dec36850652e158ad8d254e90c *man/niftyreg.Rd
8e5c7e1afbd092e444cd83282a2bfa90 *man/niftyreg.linear.Rd
470a86fb180058fd7ca4e03a69189943 *man/niftyreg.nonlinear.Rd
bd75654ada35e4c3349be7c962764dfa *man/readAffine.Rd
cd608849295442990500bd251607bd61 *man/readNifti.Rd
0dc64a92fb8c816f1775da0243d13fc9 *man/reexports.Rd
4ca71f811badc328593bda0963a48d5b *man/similarity.Rd
9f6818a1199bd2e70798c96e406734c7 *man/translate.Rd
6ae1828546bed244f3a2b2fbded65c72 *man/writeAffine.Rd
d067a5bb7971ffc1ee7c1e09fb80046a *src/AffineMatrix.cpp
dcd6e3c2edefcbae585e5606c59c59fc *src/AffineMatrix.h
8f2617d3e9f498a180d9856f3fb78734 *src/DeformationField.cpp
2d58942c566f9c3f2559d44656e8b564 *src/DeformationField.h
036791cf4a0d53024ef11eb6fb561a41 *src/Makevars
4fb8ebfb9d15b300a5dd024a7d91fa7b *src/RNifti.cpp
13b0c599d90865ac12b0a45ab27fc548 *src/aladin.cpp
249271a0980a471689a0bc76ef74a644 *src/aladin.h
4ce448c0545bfd2d556947e11ec3b6fd *src/f3d.cpp
39c07b986d125c17a4a4b940fd44730d *src/f3d.h
96c7004f5fee905829ba4a48955790b9 *src/helpers.cpp
c2916f88b994f4366a47f3570d532553 *src/helpers.h
20e5627b44965ffd71828a97749e16d1 *src/main.cpp
f31c934e1d7c3c327586080f9ca4d86d *src/nifti1_io.h
350bc3d9b229c400f739c43c6cb4fddf *src/reg-lib/AffineDeformationFieldKernel.h
b4a5a0e8a34d2832e0d324798d48ae43 *src/reg-lib/AladinContent.cpp
d5f15dafdd26b27257cfefe71244b3b0 *src/reg-lib/AladinContent.h
9f2189492c61ca62b58e3f2f623cf2e3 *src/reg-lib/BlockMatchingKernel.h
e4eb35219f56e169b8fc41325c7d7270 *src/reg-lib/ConvolutionKernel.h
e637a36dc958452509cee193c7729701 *src/reg-lib/Kernel.h
b83e8dd55081347d8b7a3e91948a353b *src/reg-lib/KernelFactory.h
c26a920646b6c0d740ef0fc873954168 *src/reg-lib/Kernels.h
09e8675620d49969793075af4031dea8 *src/reg-lib/OptimiseKernel.h
0da7c788a6d1e7c0e14c434e859af0df *src/reg-lib/Platform.cpp
e65b97d7a938db264d20dea20e6e0b54 *src/reg-lib/Platform.h
19e9a4c8a2b0713f48e590fb4478bdad *src/reg-lib/ResampleImageKernel.h
8501273de285c43b6b2da1006d97ef28 *src/reg-lib/_reg_aladin.cpp
27dbe11caf6d5288da6b37e08c0523b3 *src/reg-lib/_reg_aladin.h
7bac0efd07ae0c8e830ea295224f837d *src/reg-lib/_reg_aladin_sym.cpp
aea430072ea3531d262ad4be53a7af56 *src/reg-lib/_reg_aladin_sym.h
c7f652c6e7384f87dbe723ff8573541e *src/reg-lib/_reg_base.cpp
797715c8f75fbdb75a72c0dcab483aff *src/reg-lib/_reg_base.h
a0921dda823ad60169dda9d97b474fab *src/reg-lib/_reg_f3d.cpp
3dcc3bebe63e5d9b6f4a797f7aece21e *src/reg-lib/_reg_f3d.h
49a67d655d286e540f790c6ad2e60da8 *src/reg-lib/_reg_f3d2.cpp
b4716ce9bdbb776306f41ad9cdfe520c *src/reg-lib/_reg_f3d2.h
815121bfc621d6bd0340a10d6cc69b66 *src/reg-lib/_reg_f3d_sym.cpp
bedd7e12ddaa4e8e58c45d41710a5f4d *src/reg-lib/_reg_f3d_sym.h
0f24bca851a789cdb028ccc523815839 *src/reg-lib/cpu/CPUAffineDeformationFieldKernel.cpp
77ca805a1822893d43d72be4bee7a7a2 *src/reg-lib/cpu/CPUAffineDeformationFieldKernel.h
b13a37074be9f453f35e937869cc2d5f *src/reg-lib/cpu/CPUBlockMatchingKernel.cpp
cb689cd2f7efc4296347a20421c1fd50 *src/reg-lib/cpu/CPUBlockMatchingKernel.h
f2405398c32ef1a525f6f484676184ed *src/reg-lib/cpu/CPUConvolutionKernel.cpp
db7765b3126a0ab7e4c65943f0e07d75 *src/reg-lib/cpu/CPUConvolutionKernel.h
3041c97376d0a0970052337555c2e196 *src/reg-lib/cpu/CPUKernelFactory.cpp
0420a318d02c6617e00479d352ee22f2 *src/reg-lib/cpu/CPUKernelFactory.h
5ae49a8bdc53d45b2fdbf9b3f7a5d2e0 *src/reg-lib/cpu/CPUOptimiseKernel.cpp
db0a8defaf1d9c4aadbe4c93b15d2a9f *src/reg-lib/cpu/CPUOptimiseKernel.h
c17b8fffc38d92d66b4ef2c53297f5da *src/reg-lib/cpu/CPUResampleImageKernel.cpp
4a90fdd1308dd6d25584d1a247081497 *src/reg-lib/cpu/CPUResampleImageKernel.h
51f56aa468f7867c3034433e6736cdb7 *src/reg-lib/cpu/_reg_blockMatching.cpp
ab06678470d64fc1c57fe55edb4bb827 *src/reg-lib/cpu/_reg_blockMatching.h
f25ef172afc54a6b3baed086a324b4ca *src/reg-lib/cpu/_reg_globalTrans.cpp
6173450fc3fc945dbf8a0d8879390151 *src/reg-lib/cpu/_reg_globalTrans.h
99db1433d680fa202cb520335e9d6d4e *src/reg-lib/cpu/_reg_localTrans.cpp
58dc11c3f61dafdb54720bf8391b0594 *src/reg-lib/cpu/_reg_localTrans.h
a802cd51a9d34ffe1e643ea851db556e *src/reg-lib/cpu/_reg_localTrans_jac.cpp
d17e6b1259b7433444bea7a56241bcd8 *src/reg-lib/cpu/_reg_localTrans_jac.h
2bf51cf262edb17bff29ce1ef35a8d01 *src/reg-lib/cpu/_reg_localTrans_regul.cpp
674f895161944e1575ca2d4e9bc05622 *src/reg-lib/cpu/_reg_localTrans_regul.h
256de9f9b72ad3876bd098b258687d35 *src/reg-lib/cpu/_reg_macros.h
8492aa98ff90d2ccbd1cb30d40f37ee9 *src/reg-lib/cpu/_reg_maths.cpp
145d07bb5c7e50914afc589fb60398ea *src/reg-lib/cpu/_reg_maths.h
1dabccdc4bd7153ea64463016588f2e5 *src/reg-lib/cpu/_reg_maths_eigen.cpp
3bc83d4cf36bf484a1e5cd8dd679e940 *src/reg-lib/cpu/_reg_maths_eigen.h
de9ff6009b7c9467023cfac0c397d117 *src/reg-lib/cpu/_reg_measure.h
e3e1c89d0afde6b5dd2bd0f870f8025a *src/reg-lib/cpu/_reg_nmi.cpp
190ac6739b27eaa94548c3e6db77893b *src/reg-lib/cpu/_reg_nmi.h
84bd32967cb8b26b80a111bd50369872 *src/reg-lib/cpu/_reg_optimiser.cpp
ec33f633f3dbf299c44c0c5ad3c76aa8 *src/reg-lib/cpu/_reg_optimiser.h
e3c2b09ccd2b2d2ee681035ac7be2412 *src/reg-lib/cpu/_reg_resampling.cpp
34115a7828aabd79104003f617cfbd18 *src/reg-lib/cpu/_reg_resampling.h
a32d1fb0c91553f6101997fee5fef284 *src/reg-lib/cpu/_reg_splineBasis.cpp
84b010bd6671bf6c46b4f6eb4d8905aa *src/reg-lib/cpu/_reg_splineBasis.h
ac8a6e8a62dc24b5a3a5dac6cc67944c *src/reg-lib/cpu/_reg_tools.cpp
8671e8320c908a9efbd95834a258792c *src/reg-lib/cpu/_reg_tools.h
3146345aa692f22753bb70ebb5fd5b42 *tests/test-all.R
75f447eadaa7a2a46567f4840c1a3417 *tests/testthat/flirt.mat
f8b31e26780acf821686ca258febb579 *tests/testthat/test-15-affine.R
4ca4e556c59a3745d7a44d4b82f444b9 *tests/testthat/test-20-niftyreg.R
08736306b15d2fcc7996a9225128fa17 *tests/testthat/test-25-transform.R
02801e4ce2efc66b9f62976ddf765f0e *tests/testthat/test-30-multireg.R
469afb988c001a2be13bcf7e879daf1a *tools/figures/house-bw.jpg
b5d8c860ec502d7237607ccaa495ec21 *tools/figures/house-halfskewed.jpg
cbc14d8eb58d1e9805a74b2f2b000818 *tools/figures/house-skewed.jpg
f05fbe9f29d823461a75cd4be103383f *tools/figures/house-transformed1.jpg
745cebf3acf981bbfedf8208f73b5348 *tools/figures/house-transformed2.jpg
625dccc4f293c875ac29db2de82c81dd *tools/figures/house.jpg
