9bb6afec6eb7514c38d203ff46d90724 *DESCRIPTION
320dadff70d641564d37d2fd58559faa *NAMESPACE
70bb597ff2be3f0ffa3e745d2d23bee3 *NEWS
a37c6919c0627a30bc2da5081ed8b65b *R/PIMS.R
2e6b04c2debe13191d20b8f1b2462234 *R/RMark-package.R
d603451e31ba7e3fd49a230b034485ea *R/TransitionMatrix.R
a598acfdb3f8c0e779a7df9a138edfe9 *R/add.design.data.R
299cadf2570eee191c7579f0e26aeb96 *R/adjust.chat.R
d88487d4b0b13dea207ef14e1a303bba *R/adjust.parameter.count.R
4d1590d4ac56aa47f50f5b6e9c5e28d4 *R/cleanup.R
387ae9fd1e81c2fa6f6dc8698a214dc0 *R/collect.model.names.R
904f1c936a14c5c8eded2078d24ff8c2 *R/collect.models.R
59010404dc043e141c165a5f57be99b1 *R/compute.design.data.R
4f94cdb18c5562031bf7659ed8672901 *R/compute.link.R
043b8aedebbe32b883a7447b3a66f938 *R/compute.links.from.reals.R
e341aead46fb933b83acf87445fe90d5 *R/compute.real.R
a9a05f2c1167884d8a549f9a4cba79c4 *R/convert.inp.r
d45a5ea41708d22cd83464c9d4050052 *R/convert.link.to.real.r
2e03e32a4406f78f6c50355a1feeb9a7 *R/covariate.predictions.r
f0fae40cc6a543c9a942f8376254e5eb *R/create.mark.mcmc.R
d2dac788803e269cf3743138e4d312f6 *R/create.model.list.R
6c5d5eec6fc7c28fb9ac2c1f8d2737bb *R/deltamethod.r
edc62ba4f9ee716ba24b02971b9c8af1 *R/deriv.inverse.link.R
7ee385ca5d5e91b29eb592468e373048 *R/export.MARK.r
269a4e68471e229be062bdd8453818c7 *R/export.chdata.R
e2795bd6749676fd36d7166202fae569 *R/export.model.r
8e7b2df9828a88f1e4a0a525a521217a *R/extract.mark.output.R
6674c2dfca9e0a1794e64de497bf66a6 *R/fill.covariates.R
2d5f2dc25736ea38594d1bef72cf70c9 *R/find.covariates.R
0f7bae0069500d3863c46d327006bfaf *R/get.link.R
219dd3a4834af5daf530be61d5ecc562 *R/get.real.R
ffe8e88aee392e9993e02ea766ce86bc *R/import.chdata.R
4a2e7e00937651d36d87c6eb4e77324f *R/inverse.link.R
b1eda50a57cbbca9c1dc66afa2dc8dc5 *R/make.design.data.R
3549469c15e13485f3cdd7d587dbc165 *R/make.mark.model.R
2baec4f3f6d65945e7de0f1c2bdd9791 *R/make.time.factor.r
cdc6054c55e2f0a621b4432f63448f74 *R/mark.R
e92b6ea26a17e42d36ad5024343f030a *R/mark.wrapper.R
4408763dfd9b622b9216c3dfde72e3e0 *R/mark.wrapper.parallel.r
45d55d3152d281cbe2bb2c837c64e683 *R/mata.wald.r
d7ead145f87e5dcc88c206b1c0704b95 *R/merge.design.covariates.r
de83026b70b2113bf28de624b8e7a2ee *R/merge.mark.r
093e7076cd9e5a6b2c7fe0a5ec189e5d *R/model.average.R
fe5c5c40909763fe56023a95b3ae388d *R/model.average.default.r
29fa345895fa4a69126c93d200413d43 *R/model.average.list.r
202fe4c13fa44fdb5652c8c90ab584ca *R/model.average.marklist.R
6268bfdee8a7111ad1a2a4d00b743dda *R/model.table.R
3e810195d031b036fdf7d6fb9208d0de *R/popan.r
7a7476c3fa77c4057760ce25334edc08 *R/print.mark.R
0ad1438aff5f76e4337c2aab5e11d7a4 *R/print.summary.mark.R
52ad59fd69903fd86f0672c235c9db3d *R/process.data.R
279043f7ed23620cc7f0a51e267c35e0 *R/read.mark.binary.R
544cda5a4494cecd9bbeeed78de69992 *R/read.mark.binary.linux.R
c107e46d83f086616bd222d92704b468 *R/release.gof.R
2da676c4d0ccde10238dc56b6bedfc0b *R/remove.mark.r
f06879a67c0b021a363dadb604c5f2f1 *R/rerun.mark.R
74cfb4516dcfade315afde17de67e4a5 *R/run.mark.model.R
f8da6510256c61202af1daaddc9f712b *R/run.models.R
da48308630c04aeea53e5b457385b9a9 *R/setup.model.R
a37618b605d8a1ffb90bf8580ced9a93 *R/setup.parameters.R
4762bdb1b56bff98c432a14ae956f4ff *R/splitCH.r
6330f4e954171baad9941d6ed22d61fa *R/store.r
de9f7474470dafe5882bb28a60717df6 *R/summary.ch.r
b31a242f664014e2e23c86c81d76c9fc *R/summary.mark.R
343a6f9132653b30097a783c4f99833d *R/utility.r
40922e79da118df4cd6920e5bc47b5e5 *R/valid.parameters.R
2d47d42ff3ccab9ad9e86d7c34a9d125 *R/var.components.R
8f0c836bde754dab215caabcf69e9cdb *R/var.components.reml.r
9965bb457a22f13e009de3e35fa37469 *R/zzz.R
1d5f13d84d841089658f4bf80479f49f *data/Blackduck.rda
ad32c1fdee1b8df97e98872d97e410cd *data/Donovan.7.rda
e8bf201d53609791b005ac9a779a006f *data/Donovan.8.rda
458c2a812e5480b5771ab39b324eb14a *data/IELogitNormalMR.rda
892b3fb1f9e95786bd86a8bdcd27027e *data/LASP.rda
9b0fa5db571ede2af47523bc82f44d87 *data/LogitNormalMR.rda
7fe8f719d12c121de6bfdf7098b9b164 *data/NicholsMSOccupancy.rda
6bca3bcded8863b8dc5bedab3bcbe8a0 *data/PoissonMR.rda
ff50f02d7891f32f28a0004fcfdf9cf9 *data/Poisson_twoMR.rda
cfb8a5c7aac8d35abac00b8d323b7740 *data/RDOccupancy.rda
865dc970db1f84244a54f56eb71101f3 *data/RDSalamander.rda
fd721dd1ad36488cbdf6083db169412f *data/brownie.rda
9b53be6d5d943985fdc474e244497b47 *data/crdms.rda
84b837b6b9a246b46f14112daaa73b7f *data/deer.rda
86fa75dacd73a1e0c85a547b19b08f0c *data/dipper.rda
d4a9e7a932ce5e87209f938d1682136c *data/edwards.eberhardt.rda
4954f907dc0c6c75327960a898ad5d7f *data/example.data.rda
fd8de7cdb2f3704b8d5dff69fe3d7325 *data/killdeer.rda
eec28a6672ee77abe66c0cc2d2bb5034 *data/mallard.rda
7eaf404871d785bdd7c88b24341c8c69 *data/mstrata.rda
4b0f4d2db407178766f0f540563e607a *data/robust.rda
a9813ff6695570fedf31962394c41d19 *data/salamander.rda
00d324b835bc347ced8cc8ce396e3097 *data/weta.rda
4f99b5d38dc8f432c631abb7c59a4ce7 *data/wwdo.09.rda
1c532e375c3b423112057172517c4302 *data/wwdo.10.rda
f3d2daecfbbe099cdaecac7241b7e888 *inst/CITATION
724ab3d3a96a8602da3b4f39cc3bef8a *inst/MarkModels.pdf
e8aad2524968b4c97f188bb6c8f27b68 *inst/README.txt
f6b1f65b58f0a12d8be17ad213f6d173 *inst/extdata/BLCKDUCK.INP
74b97a50d2282afb492d1d124d3faf51 *inst/extdata/BROWNADT.INP
d07f264c3e64e2726533c9335f9b62b9 *inst/extdata/Blackduck.txt
36a6d1e8d59d3620e6bf4b62977d6de6 *inst/extdata/Brownie.inp
ddc52aa126ce70815cf71f12a0f6adf0 *inst/extdata/Donovan.7.inp
489c21c0ccae890d4278c6ac49c69197 *inst/extdata/Donovan.8.inp
7bc349166ab76d6fc6b79269ab1408ab *inst/extdata/EDWARDSANDEBERHARDT.INP
c34b4cddc49b1e62d833a04bb422fff6 *inst/extdata/F_AGE.INP
38823e8d27c8c70477ee080de8c04afb *inst/extdata/LD1.inp
c594eab39c0a7980e7cf8dce817a75a4 *inst/extdata/LINEAR.INP
df39695b5f71b928f15c9b65a17c78bf *inst/extdata/MSSURV.INP
b2a04889c534c046a767ec839de94371 *inst/extdata/MS_rdsimple1.inp
90968dd2ba4baf436f18ca55f0f05436 *inst/extdata/M_AGE.INP
ecb13a6d1b6beebe56087c91ecbd3c2a *inst/extdata/MallardNestExample.inp
b78595a5af1a780aac863a380c07e378 *inst/extdata/NicholsMSOccupancy.inp
ab4f1fa54e4f4b76479c19f113a50523 *inst/extdata/Pass3MStrata5.inp
4265333d06cf75618091e2e951cf0d59 *inst/extdata/RDSalamander.inp
81a70c4d6098b5b6cdcb31d3eef4f972 *inst/extdata/ROBUST.INP
49ea636ed064df6d403fa51b585f868e *inst/extdata/aa.inp
b696b42cb06ce7a0de608eb978e1824b *inst/extdata/adult.inp
45d08cd799804834449507db82e5bbcd *inst/extdata/age-transients-full.inp
a79c5989f3b66c3865552c92e5dc82f3 *inst/extdata/age.inp
dfc804f97dec97f755df87ba57440e9f *inst/extdata/age_ya.inp
9293e73480edcd3d006998af78f637c8 *inst/extdata/capsid.inp
c170fb82089bf3d87652a04d1aff9753 *inst/extdata/chase.inp
dfbbb3f90f541d117dfc307c43d18b5d *inst/extdata/cjs3grp.inp
fb92c59c981d52e9996f02d172a32df4 *inst/extdata/clogit_demo.inp
942a47d02d9a40b53fd725a0093d7c46 *inst/extdata/deer.inp
7f41f86fe9178f2127d52e1dd52f809d *inst/extdata/dipper.inp
959ebe116b5842bc36aad89741479def *inst/extdata/dipper.txt
128e570be606ec5484643f1b308e52cb *inst/extdata/ed.inp
b7a243ca7d0b8dc6ee8e705772a6f5cd *inst/extdata/ed_males.inp
6042a2d31958f8a7319ab876538dcbd0 *inst/extdata/edwardsandeberhardt.txt
239b7fc03b9d6a4921871e83ec85102e *inst/extdata/effect_size.inp
9de4a819d0c3ec0fa57831d2d2bd3139 *inst/extdata/effect_size3.inp
3a7ef45fae6c0e086a2d77c56d619dcc *inst/extdata/example.data.txt
b2e066d275eb381c5f8e9790dca93d65 *inst/extdata/huggins.inp
f43ba679ef28128871b42427e03160b4 *inst/extdata/indcov1.inp
40246c9b16d6feb263fd3daebdca7f91 *inst/extdata/indcov2.inp
72798486641420a5b809e60f979bb8a6 *inst/extdata/interval.inp
b8aa386bc2ffe4d0ccd151f0d25eb683 *inst/extdata/island.inp
1860ca3834a3d1ee964d5c519153d739 *inst/extdata/killdeer.inp
44d3a5ecead2152e5a47d295aca3fe70 *inst/extdata/killdeer.txt
c75c90b426d7d3008e42d8ae7ad0be86 *inst/extdata/mallard.txt
bd89501bfeec5171a8f18c8ae4c89422 *inst/extdata/mixed_closed1.inp
421f8c453cbddca684e9275513277cc0 *inst/extdata/ms_cjs.inp
4d76ce0b8d0703dc6ff9f6efee7213b0 *inst/extdata/ms_directional.inp
d4fb41eaeef0917ed3a751dd049fc9f2 *inst/extdata/ms_gof.inp
82106501288c55966dd1e3df479d4c1e *inst/extdata/mstrata.txt
b847e02cac5da0eef72917c59d8c52dd *inst/extdata/multi_group.inp
c57fa98a46aa5debbe3e3cfd638ad1c6 *inst/extdata/plover_mark.inp
8e3443f8f9da6f51db1497991a416e67 *inst/extdata/rd_complex1.inp
5f3871bac8d7e6219e827a7b5b81bb18 *inst/extdata/rd_simple1.inp
bf3eef98a58a04b949264a2ccba0f935 *inst/extdata/recruit-ms.inp
aae7b6c283ce47ee1e4a45400b5dd77e *inst/extdata/robust.txt
70149a809da484cd0a283494c8e16c22 *inst/extdata/salamander.inp
1b8f9f67482f3f1642ac6b6aec933636 *inst/extdata/simple_closed1.inp
13ef03c111f6f1a1fb71c4839716192e *inst/extdata/staggered.inp
0dca82f50fcce23e638c485c44ae611e *inst/extdata/transient.inp
0c0b6839316c3c7c95cd9842fedd7299 *inst/extdata/weta.txt
33949ebad462c615af738183960d0949 *inst/extdata/yngadt.inp
39ad8865679612ef956a44c67abf5c5c *inst/extdata/young.inp
397983c6f0551da84431de6a55d464cf *inst/models.txt
d9e28bc56bdc2c4794f101c87e270549 *inst/parameters.txt
ec894ed1af80869df0070b051741e83a *man/ABeginnersGuide.Rd
d667006d67029550b7c6c11271287074 *man/Blackduck.Rd
61ff59f65dd257e2b3324d9ee86b1087 *man/Donovan.7.Rd
0e8985a7d19d621229e6eaa94a072569 *man/Donovan.8.Rd
86b8821c6082d88cc2da68fb9164aa4b *man/IELogitNormalMR.Rd
5efbf7548c283d7ec2883275871d1b17 *man/LogitNormalMR.Rd
e1998cfd7abf3d53388196c4741da8f7 *man/NicholsMSOccupancy.Rd
41c5e78d90d7201ea807c169ec70c81d *man/PIMS.Rd
7e099f7ccb7e7b2d4e4fe19b1b020fac *man/PoissonMR.Rd
2bf4e3d9c8431d7daf7e56a41eaf32c4 *man/Poisson_twoMR.Rd
da046948419a1dd0afed90f10e6c7f92 *man/RDOccupancy.Rd
391be175f48210a123521a626b1285b5 *man/RDSalamander.Rd
0631973f9eb15eaa48fd3a1e2a51193b *man/TransitionMatrix.Rd
74fcb65a674faef730ded99d7d1b05ba *man/Whatsnew.Rd
24cc73da1b0090884244835fcbf73de2 *man/add.design.data.Rd
b0ddb2c5f82200de81ccb6f5a7170524 *man/adjust.parameter.count.Rd
9dfeb0bbb857cc90af5c4e95e62d791d *man/adjust.value.Rd
6dbaaf4197a4077768c8977051cea3fd *man/brownie.Rd
7b9820e29fab289c0197904bd2a19cc8 *man/cleanup.Rd
1785b5ad5046390434cebdcb953492eb *man/collect.model.names.Rd
fc75365a72c5eb610c4e1db051a32307 *man/collect.models.Rd
2c9b906ae8dd1bf490157b729c8aa3f1 *man/compute.design.data.Rd
bdd8282fd94bff74e1be828a18ded03e *man/compute.link.Rd
4fd3955e87d71024d4295df7e468d654 *man/compute.links.from.reals.Rd
127ec9e27c930fb5672171fa67e81375 *man/compute.real.Rd
cbbbc49e58fe2354d4c690fbed9130f1 *man/convert.inp.Rd
5d2397a3e733cac2d9f696528bd1bea0 *man/convert.link.to.real.Rd
d96a4f7b3e585f294210c21d49446c71 *man/covariate.predictions.Rd
5b0e573e7c9b26dc60daf9fc736f53b6 *man/crdms.Rd
843a6dad8fa984156ea8fc676af2cedb *man/create.mark.mcmc.Rd
6918cca1f9facd7fb82846e1daa6925d *man/create.model.list.Rd
c3ab43f83581e3b830315fecc3537f83 *man/deer.Rd
53d98a3eab8d3e5d0de529979d0cda97 *man/deltamethod.special.Rd
f3d24caa943ca74aed9db3b4c1b03f03 *man/deriv_inverse.link.Rd
21c26d4f7580eb9151eb164d1ce0a724 *man/dipper.Rd
d02fa3a0d8f61068a0c687dcfd8b12cd *man/edwards.eberhardt.Rd
f46b08c6eff8875c95687fc3ae4504f9 *man/example.data.Rd
acce257bfee0267e06a5f921b60a8a80 *man/export.MARK.Rd
0982da2cca8f75c798b5f910bac7661d *man/export.chdata.Rd
6988b048ee407bd0816a34c6e80bc249 *man/export.model.Rd
21b6f193d553d5cf8c9e5811523154ad *man/extract.indices.Rd
370cebdd43c1ef64686648d8fa3dd35d *man/extract.mark.output.Rd
a755bb1f274360bbb839872f8728b34c *man/fill.covariates.Rd
3c33ec2a067a1f2b773e99550e9d2f97 *man/find.covariates.Rd
5c4f180a3186ac9cc1c8e626a2a62d75 *man/get.link.Rd
3b6e4b3106f6b88efb72a09df5a544be *man/get.real.Rd
7bac2a99453a22f09a62d2eff05f2655 *man/import.chdata.Rd
26e3d5b907d39a2acd1741033dc8877d *man/inverse.link.Rd
a56075017a6592fe80af677fadbb6007 *man/killdeer.Rd
fde45386e13af07c6b88fb17bc0835cc *man/larksparrow.Rd
76cdbb7fae7bf366b970c47472bdd2e7 *man/load.model.Rd
84d1b2ffc6f43f42d36fd448ff9346d8 *man/make.design.data.Rd
015542ca3644eae8f848278986126bdb *man/make.mark.model.Rd
9709306f90c6973cdf63e77db87c29e2 *man/make.time.factor.Rd
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9e59d1305230cdf612f9809ae1be6f82 *man/mark.Rd
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83954f972e1d7510b7e4ba70d7550815 *man/mark.wrapper.parallel.Rd
0633cf893805c1a835d627726fe10ead *man/mata.wald.Rd
16078cd7c7e6619c442776b85a434f48 *man/merge.mark.Rd
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4d58dc5ca5530d220b644c3f93333988 *man/model.average.Rd
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138d5fe7f87ac473a8fec6aba10a0f05 *man/model.table.Rd
ca5130449a2d4686f8a6e63fe1fc8880 *man/mstrata.Rd
92a64e9f3d3fc26dd060552ca5c575fd *man/popan.derived.Rd
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5def4f29745850168beca953e6354d07 *man/process.data.Rd
6a908eccfd197613b603f31a4783711f *man/read.mark.binary.Rd
ed9d1a0f6ff2173f80d19b37d60baa41 *man/release.gof.Rd
19f3ef5e7e98172a6bd554c0d6faf519 *man/remove.mark.Rd
503743d1a536f8e1db65a36093888910 *man/rerun.mark.Rd
2dee260ca5b5540ab27ff1ff100ff5a3 *man/robust.Rd
f1377060bda0c3f89e8cc54f38595074 *man/run.mark.model.Rd
1b480b8163617cf122be27a41390baa8 *man/run.models.Rd
6f275a648693bd5d71998b28ea8b736e *man/salamander.Rd
adcfb6c6d13a40cf79a01fdaac0e9171 *man/setup.model.Rd
490b5949a475365482f6f386e7965a56 *man/setup.parameters.Rd
31673c85388542c348557f0807a759f9 *man/splitCH.Rd
c83afd1a490c061cf5ac3f98c3ce5f55 *man/store.Rd
60ff76269c7e80b960ad7fb282b57ef7 *man/strip.comments.Rd
863e710f41103a06f8560858b32f6b6f *man/summary.mark.Rd
7ca870cee36b960816fede01eccd30aa *man/summary_ch.Rd
404262d5203c1112a55d723526c4f5f3 *man/valid.parameters.Rd
87573e0bb658875be328814827a453f4 *man/var.components.Rd
e5249961c808ac3b5a5ca00a0156e538 *man/var.components.reml.Rd
e5af7b4dd2c767aca8ac3c7a451c6330 *man/weta.Rd
09542317a010c311dc82c788d8075553 *man/wwdo.popan.Rd
