Package: RClone
Version: 1.0.3
Date: 2022-07-22
Title: Partially Clonal Populations Analysis
Authors@R: c(
    person("Sophie", "Arnaud-Haond", email = "sophie.arnaud@ifremer.fr", role = "aut"),
    person("Diane", "Bailleul", email = "diane.bailleul.pro@gmail.com", role = c("aut", "cre")),
    person("Solenn", "Stoeckel", role = "ctb"))
Author: Sophie Arnaud-Haond [aut],
  Diane Bailleul [aut, cre],
  Solenn Stoeckel [ctb]
Maintainer: Diane Bailleul <diane.bailleul.pro@gmail.com>
Description: R version of 'GenClone' (a computer program to analyse genotypic data, test for clonality and describe spatial clonal organization, Arnaud-Haond & Belkhir 2007, <https://wwz.ifremer.fr/clonix/content/download/68205/903914/file/GenClone2.0.setup.zip>), this package allows clone handling as 'GenClone' does, plus the possibility to work with several populations, MultiLocus Lineages (MLL) custom definition and use, and p-value calculation for psex statistic (probability of originating from distinct sexual events) and psex_Fis statistic (taking account of Hardy-Weinberg equilibrium departure) as 'MLGsim'/'MLGsim2' (a program for detecting clones using a simulation approach, Stenberg et al. 2003).
License: GPL (>= 2.0)
LazyLoad: yes
Depends: R (>= 3.2.0), graphics, stats, grDevices, utils, datasets,
        methods
URL: https://github.com/dbailleul/RClone
Suggests: knitr, rmarkdown, pander, testthat
VignetteBuilder: knitr, rmarkdown
NeedsCompilation: no
Packaged: 2021-05-15 10:22:12 UTC; jerome
Repository: CRAN
Date/Publication: 2021-05-15 13:00:02 UTC
