# Generated by roxygen2: do not edit by hand

export(AddParSettingProFAST)
export(IntegrateSRTData)
export(ProFAST)
export(ProFAST_run)
export(ProFAST_structure)
export(RunHarmonyLouvain)
export(RuniSCMEB)
export(SelectHKgenes)
export(get_r2_mcfadden)
export(iscmeb_run)
export(model_set_ProFAST)
export(transferGeneNames)
import(gtools)
importFrom(AnnotationDbi,mapIds)
importFrom(DR.SC,FindSVGs)
importFrom(Matrix,sparseMatrix)
importFrom(Matrix,t)
importFrom(PRECAST,Add_embed)
importFrom(Seurat,CreateDimReducObject)
importFrom(Seurat,CreateSeuratObject)
importFrom(Seurat,DefaultAssay)
importFrom(Seurat,FindClusters)
importFrom(Seurat,FindNeighbors)
importFrom(Seurat,`DefaultAssay<-`)
importFrom(Seurat,`Idents<-`)
importFrom(biomaRt,getBM)
importFrom(biomaRt,useDataset)
importFrom(biomaRt,useMart)
importFrom(harmony,HarmonyMatrix)
importFrom(irlba,irlba)
importFrom(mclust,Mclust)
importFrom(mclust,mclustBIC)
importFrom(methods,as)
importFrom(methods,new)
importFrom(methods,setClass)
importFrom(nnet,multinom)
importFrom(org.Hs.eg.db,org.Hs.eg.db)
importFrom(org.Mm.eg.db,org.Mm.eg.db)
importFrom(parallel,clusterExport)
importFrom(parallel,detectCores)
importFrom(parallel,makeCluster)
importFrom(parallel,parLapply)
importFrom(parallel,stopCluster)
importFrom(pbapply,pblapply)
importFrom(performance,r2_mcfadden)
importFrom(stats,as.formula)
importFrom(stats,coef)
importFrom(stats,cov)
importFrom(stats,lm)
importFrom(stats,median)
importFrom(stats,model.matrix)
importFrom(stats,model.matrix.lm)
importFrom(stats,residuals)
importFrom(stats,var)
importFrom(utils,data)
useDynLib(ProFAST, .registration = TRUE)
