79d42a50e8ea34b4cc8f25cd7dda15d3 *DESCRIPTION
143d9fef58fd0f00b631116a40ad7cfd *LICENSE
19639cf0129594f5d4fcb4a892d9c6b0 *NAMESPACE
153407fa2177abc962b7569d94848adf *NEWS.md
d7d7fcfacfc689cba1b0f1135016435c *R/io.R
6043c65dce226fde02f3a53d9aa29621 *R/matrixData.R
e012c3db8950681f429d4c3f6adcd743 *R/matrixDataMethods.R
d0d4ed7bebe139b1327aa1e75aadeee2 *R/params.R
58e058f14324464d2d1a39478849c8b8 *README.md
d2ad669353c53e622d7b69cbc747eda4 *build/vignette.rds
de67c739953706f7ad6e4691344eb19e *inst/doc/Using-Perseus-data-in-R.R
00c8a32e3abf2baebc4e034c8e4816b7 *inst/doc/Using-Perseus-data-in-R.Rmd
c6044602d9c8e04d812841416170f043 *inst/doc/Using-Perseus-data-in-R.html
395c9f027ff31c437efd2a2ea709a574 *inst/extdata/matrix1.txt
e167bc14884d84a40d030ae63c610d05 *inst/extdata/matrix2.txt
b46514080bfebdc476d5f2bd599075c4 *inst/extdata/matrix3.txt
f20661d2ac9893347d34aa7cd9c3b742 *inst/extdata/matrix4.txt
f727b41ace806f1cce2e7610c1bb8be9 *inst/extdata/parameters1.xml
a69825455f0fd3c6f1e0119105a0a83c *man/MatrixDataCheck.Rd
d2ecb9273af9d4480fd0fa2410df6720 *man/annotCols-set.Rd
772c675df6192ab7e79b540cb0c1e391 *man/annotCols.Rd
87e179f7cd252e67bb1534eb7ea3b3dc *man/annotRows-set.Rd
103d7c775911addb6ea70bd9d93b0e75 *man/annotRows.Rd
e544f8b1a7470ab33d4e47aa8fc2163e *man/as.ExpressionSet.matrixData.Rd
567dee70579840e1bad4cf142338035f *man/as.matrixData.ExpressionSet.Rd
a0cfb4cebf33200756266d87ad6902c8 *man/boolParamValue.Rd
58015a78286a1a744b32b91d7ec13223 *man/create_annotRows.Rd
4f1121c80727e7bde9a439bb3500e920 *man/description-set.Rd
34ff5c1f8df0911dd8135c9b9f57f272 *man/description.Rd
13772e24ad10ef7ced3d0734c872ebc5 *man/imputeData-set.Rd
c887472ac3d559bc7454402271c2a4fb *man/imputeData.Rd
b16e295ddb6cf3e24e5758210ee2586b *man/infer_perseus_annotation_types.Rd
bb167e7cd11e3a0aa190237f52350d3a *man/initialize-matrixData-method.Rd
e6d60944702ec65b1caa2b0e7be33d1e *man/intParamValue.Rd
03043d027258014e09517814891da8df *man/main-set.Rd
711863f3b4b4757ac98a0bcef4c53591 *man/main.Rd
b5d5acd8ef63224d03b7e89a26b04b47 *man/matrixData-class.Rd
05c9ed4742f69f56064c3b105cd5d9e3 *man/matrixData-methods.Rd
03feb7a8921929319872a6e9da3272dd *man/matrixData.Rd
da2cb8bc9405855dbdd191d60279352e *man/names.matrixData.Rd
44e60b148aab40eeec05348cb03f3bd8 *man/parseParameters.Rd
a74019692a2c1a42a1d8897798fa576d *man/qualityData-set.Rd
0b254f5127b5b7ce95d98098b7cb2e0c *man/qualityData.Rd
189bb8bbca392b14949b08b5ee449ed0 *man/read.perseus.Rd
1c534c8a87bb06ff136df19e9b77b34c *man/singleChoiceParamInd.Rd
f7fa781d0aae1e181fa16e649bd2dd24 *man/singleChoiceParamValue.Rd
1f080b3334ee1567a40b2742fb1ccc41 *man/write.perseus.Rd
2fd9504839245d310f9a4724bb0b7002 *tests/testthat.R
5640a6e9848475faa8b577383312dbf9 *tests/testthat/testCoercionMethods.R
79b2d3ce27abd5adfea599d3e64efdf3 *tests/testthat/testIO.R
00e0dd535c0db8303aa3bf4526631c70 *tests/testthat/testMatrixData.R
d05dc9ddd748077900ad8ca831c313d8 *tests/testthat/testParameters.R
00c8a32e3abf2baebc4e034c8e4816b7 *vignettes/Using-Perseus-data-in-R.Rmd
