Package: POUMM
Type: Package
Title: The Phylogenetic Ornstein-Uhlenbeck Mixed Model
Version: 1.2.1
Date: 2017-03-10
Authors@R: person("Venelin", "Mitov", email = "vmitov@gmail.com",
                 role = c("aut", "cre", "cph"))
Description: Combined maximum likelihood and Bayesian inference of the 
    univariate Phylogenetic Ornstein-Uhlenbeck Mixed Model; Fast POUMM likelihood
    calculation. Maximum likelihood inference of the genotypic values
    at the tips of a phylogeny assuming that the trait has evolved on it 
    according to a POUMM with specified genotypic value at the root.
    Functions for summarizing and plotting the inference results; 
    Functions for simulation of univariate continuous trait evolution along a 
    phylogenetic tree.
License: GPL (>= 3.0)
LazyData: true
Depends: R (>= 3.1.0), stats, Rcpp, methods
LinkingTo: Rcpp, RcppArmadillo
Imports: ape, data.table, coda, foreach, ggplot2, gsl, Matrix
Suggests: testthat, TreeSim (>= 2.2), Rmpfr, mvtnorm, lmtest, knitr,
        rmarkdown, parallel, doParallel
RoxygenNote: 5.0.1
VignetteBuilder: knitr
ByteCompile: yes
NeedsCompilation: yes
Packaged: 2017-03-10 14:49:07 UTC; vmitov
Author: Venelin Mitov [aut, cre, cph]
Maintainer: Venelin Mitov <vmitov@gmail.com>
Repository: CRAN
Date/Publication: 2017-03-11 09:18:21
