Package: ORdensity
Type: Package
Title: Identification of Differentially Expressed Genes
Version: 1.0
Author: José María Martínez Otzeta, Concepción Arenas, Basilio Sierra, Itziar Irigoien  
Maintainer: José María Martínez Otzeta <josemaria.martinezo@ehu.eus>
Description: Automated discovery of differentially expressed genes. The method (called ORdensity) is composed of two phases: discovering potential differentially expressed genes and recognizing differentially expressed genes. It makes use of a permutation resampling procedure to build outlying and density indexes. References: a) Irigoien, I. and Arenas, C. (2018). "Identification of differentially expressed genes by means of outlier detection". <doi:10.1186/s12859-018-2318-8>. b) Martínez-Otzeta, J. M., Irigoien, I., Sierra, B., and Arenas, C. (2020). "ORdensity: user-friendly R package to identify differentially expressed genes". <doi:10.1186/s12859-020-3463-4>. 
Depends: R (>= 2.10)
License: GPL (>= 2)
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.0
Imports: cluster, distances, Rfast, plyr, methods, foreach, doRNG,
        parallel, doParallel
NeedsCompilation: no
Packaged: 2020-05-11 16:15:59 UTC; paxpan
Repository: CRAN
Date/Publication: 2020-05-13 14:40:02 UTC
