668ab4c3d1ac8a2d73ac486fd8e5ba79 *DESCRIPTION
dc463bcaef88f72ce59f851dcea117db *NAMESPACE
192be80e51d0299e5f0e915bb8f1a19e *NEWS
04f33b56f5ccb3f8668c07e3d9aaa7c3 *R/Bioc-layer.R
67be79625bdfdd06e76bb2787a9f436d *R/NMF-class.R
cb92fbe2ad8ed07d3b6988790361cf89 *R/NMFOffset-class.R
56c06d6a59b72229d6fed8139b5917e1 *R/NMFSeed-class.R
a6e1c940afa9605ea59dd22fdedb30d7 *R/NMFSet-class.R
4d669da42d6a80c8935da68991d5cfec *R/NMFStrategy-class.R
7c005d6fc277f6c4f194b3be145e9e11 *R/NMFStrategyFunction-class.R
952c6d74fe3200647696bd1755707cf8 *R/NMFStrategyIterative-class.R
9057be72901f4081ffd36dff90064e0c *R/NMFStrategyOctave-class.R
9bfd9b9a7f095d2d23aad3192c7dad93 *R/NMFfit-class.R
d4a9ccb2a64df0fcc003732b22087b29 *R/NMFns-class.R
43617bc2d80d2df2fa79aac76e6877f4 *R/NMFplots.R
06ce7f9fb62284b85f8faea26cd9bc08 *R/NMFstd-class.R
b93c44a16dcada0f9afbdabd898c0294 *R/aheatmap.R
2215efb3fafbbae155830aed6b0b3ae1 *R/algorithmic.R
5c93753b2b401fd5b8c80b592f93193d *R/algorithms-base.R
bc346e375c98c41a03c3ae745b5dbdf9 *R/algorithms-brunet.R
015a5cef7738322d66ae1f280225f9e6 *R/algorithms-lnmf.R
6600c764faf7481013e0d6481fc25151 *R/algorithms-lsnmf.R
ff9c9ac7006e8ef914ddb1d883316cbb *R/algorithms-pe-nmf.R
c7345e2125689ff69487338672fead40 *R/algorithms-siNMF.R
512da544843f613eeb487c24e73095ce *R/algorithms-snmf.R
eca172be180d1e51dec38a7aaab54bee *R/atracks.R
04c8a4c2f078a8327a068943eef561d6 *R/colorcode.R
7872d34875136dc2b2e8c1875ce2caa7 *R/data.R
d5c1883b5350a8285e19c2772ceb50d8 *R/extractFeatures.R
ec3cfef0d083ed95661a6c57bd61e660 *R/fixed-terms.R
1f90bca8a7b53737476d0956b55502ab *R/grid.R
5cf50ed45523796cab2a7a9533fd6981 *R/heatmaps.R
8ae4dc88757079df32de4d541247444c *R/nmf-package.R
8cb380f3596ae6bd5f7bd26cfc6dbbdf *R/nmf.R
b0ef416f59a1be65a4409b9af8d4b9e0 *R/nmfModel.R
b775850b0cf2d25c9d4f674298030b3a *R/options.R
4888147bee54949ca191fa91cb17d668 *R/parallel.R
8ea29d577c7c4e8f8b4dc34ba4421da4 *R/registry-algorithms.R
bd61f889b0bb039c703a7de9898e5fbc *R/registry-seed.R
66ca4afe8515dedd71d07dc05bbcc4d7 *R/registry.R
c28c1144175993becd60f5a16156a3e2 *R/rmatrix.R
b1d44e778d211021bc1754e90551c7c5 *R/rnmf.R
373909c677f0e1db2301f30638145a13 *R/run.R
dd767a7d1fde7adfe30b3fee7cf86f5b *R/seed-base.R
1fcf1d8cb6162329731c7dd6d02c8a97 *R/seed-ica.R
5ae81c6a61fc0e16090acde2f16da5d4 *R/seed-nndsvd.R
71bf9f5ea7e161d5b3604040e37785ad *R/setNMFClass.R
5017945c10bf9b95560568b58c90559a *R/simulation.R
610b78f4f8f21a5a85d97967e4577bc8 *R/tests.R
4d204e4cda9cdcb86f26bc220e0c3408 *R/transforms.R
ce8005200ba770a584eab5ae7f703bb9 *R/utils.R
77bc2b9255b6a8b6044e67e08ec91284 *R/versions.R
ca5b072a375cfc90d9a1b8530a2159dc *README.md
551e2ca0a05eff9062c105483449fac4 *TODO
7ce651165cacaa2ee6b9dc93f0238d35 *build/vignette.rds
f8015e2bc710fb0bf869d2fdddf90e73 *data/esGolub.rda
7ee636d67aaf85d2b38c87f512559c1d *demo/00Index
5d230c7b9bd8450e8f3621f0fa2e8fe9 *demo/aheatmap.R
1772a84edd497138e1c2026608d99348 *demo/heatmaps.R
51502b8ceeab50a22383047790cc5ab6 *demo/nmf.R
64e0559e3860021948647aaa5f831499 *inst/CITATION
c4d05e519580e330b6c7693b18650773 *inst/REFERENCES.bib
b8685571f46f595488cf8a6811e5a748 *inst/doc/NMF-unitTests.R
888e8d888eefa87589a5d1846a1b4dea *inst/doc/NMF-unitTests.Rnw
4721c186b35c1cb974b8a57aa56e02c5 *inst/doc/NMF-unitTests.pdf
11cdd75b60fc3577bf8e22c73c717cf1 *inst/doc/NMF-vignette.R
d3a631ff66077530b722b7c779263367 *inst/doc/NMF-vignette.Rnw
c8ca9dd04271005e6e8253264380d26b *inst/doc/NMF-vignette.pdf
490308526e45334c1526083977dce954 *inst/doc/consensus.pdf
5a53da6ca7bf0ae84bae0e8e4ff5984b *inst/doc/heatmaps.R
117e593dae265395cc28634365848af2 *inst/doc/heatmaps.Rnw
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2952972c46324b0beb29d6892b7e2e40 *inst/scripts/report.Rmd
ede84a7c14827aaf8388753d3782649b *inst/tests/runit.NMFSet.r
185a0cc2211506feff114fa1f7720e1f *inst/tests/runit.NMFStrategy-class.r
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69fb12d4a21c13d82b43f472d60adb5f *inst/tests/runit.algorithms.r
d989ecfa90aef8cc16a84520fb3763f4 *inst/tests/runit.bioc.r
f252a885bbb0046bd55e59fbd511888b *inst/tests/runit.distance.r
3ac992c6681a6d2f7b014904db460648 *inst/tests/runit.interface.r
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4fc04c7ba5d73eb1b804a9d25c436a3f *inst/tests/runit.utils.r
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9d50da90ee74c75a432a7cd900578c0f *man/NMFfitXn-class.Rd
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26389df3557196423682198ca30e4490 *man/fit.Rd
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48346311c56811ab4bfc502a46feac77 *man/nmf_update_KL.Rd
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888e8d888eefa87589a5d1846a1b4dea *vignettes/NMF-unitTests.Rnw
d3a631ff66077530b722b7c779263367 *vignettes/NMF-vignette.Rnw
e80ff821d37969bdb7ff73081b8f7c53 *vignettes/consensus.pdf
117e593dae265395cc28634365848af2 *vignettes/heatmaps.Rnw
c281ae2285729d8ddfb72a1dd198b148 *vignettes/src/bmc.R
