f54b115b674791d2ba7ce90b46a5b47d *DESCRIPTION
3000208d539ec061b899bce1d9ce9404 *LICENSE
e5c4eb3988c43a6aec2ebbf4d60e669f *NAMESPACE
a8a625ba8381ec10f2cc8f74f2a7241d *NEWS.md
873aa76ae2f23caa93fdf14ef412ae99 *R/GSE74821.R
22b570827e35fbfc2578c3fafa135f1c *R/autoplot.R
19b2a63b7e79bb7a668381ae83cc9fa8 *R/details_outlier.R
2bd9520b00ba08b912c4ac277e50ab10 *R/exclude_outliers.R
c28f68e9f6e11e12c0a5e946984396d9 *R/factor_calculation.R
2f51c7651b1e6c7c7786f03283b27c0e *R/find_housekeeping.R
68b92ba6686374197657dce43c013837 *R/format_counts.R
4ca39dd12644175d00a15921b7e5cfb9 *R/format_tag_content.R
c0e5bcaa7c973157b6bc404f7a1785e7 *R/geometric_housekeeping.R
870cf7a5e7379406aaa87c0b2286f662 *R/geometric_mean.R
5388bf478877e123c3da6289e68614a2 *R/geometric_probes.R
92cd2bc44549d02ed605e4257f6b11f6 *R/norm_geo.R
b49367df2f495d5f71ff6af37eb90223 *R/norm_glm.R
87865ebe558009b700e1189251676a87 *R/normalise.R
f77cb2c086e35680285faa236be1eb09 *R/normalise_counts.R
dbbdfc4152d97f67d8ac7495d433154f *R/print.R
04b38e60869a6ef8a3db2c9973109544 *R/probe_exclusion.R
524edc1c5c30c98334a282bb24907cf8 *R/qc_features.R
74c6347d13cf2ec1bf12673417503789 *R/qc_imaging.R
19858309989de74ff1ae7d06530be447 *R/qc_limit_detection.R
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512e89b6cc4da1dd7f6c18c320dfb28c *R/qc_rcc.R
0d420e16ffa800c209c5ede3bc57d036 *R/read_rcc.R
590a0d1d214c9429ef3ca778d512386a *R/read_tags.R
dfcddd0b8f7e75f7dd77e167240031ab *R/render.R
ba2d9e0c4c7e21888f8443653b6bb949 *R/summarise.R
7ff148b054faaf36d125e8665c842375 *R/utils-autoplot.R
8d2487dbf45064f33b08e5a80830b68e *R/utils-pipe.R
63b2f47b0e3ba69ee2b809d2759aae01 *R/visualise.R
a8ce92d6395f102fdd264890fd816feb *README.md
0604c086dcb4316efee80af4e96084a3 *build/vignette.rds
9872b4f616480f6cd63295d7641db005 *data/GSE74821.rda
6c01ee7a163456b2619f88969f06f717 *inst/CITATION
7184ddef85c20c8f928f4cfa4d824861 *inst/doc/NACHO.R
6cbaa4a976233a1a9f3bd39bc5731cac *inst/doc/NACHO.Rmd
a689fab732c74138474c81e9628409e3 *inst/doc/NACHO.html
78f16372a36d9c652a841c9f03bf2094 *man/GSE74821.Rd
7a7191d39ca4f98038ccbc2e44becb62 *man/autoplot.Rd
b0ff419cebad46af22be74bf53c3caff *man/autoplot.nacho.Rd
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418acc9944ed66855d8ca26f11bec40c *man/normalise_counts.Rd
1f7896a1b866ff9ae89ba35be7c7b6f1 *man/pipe.Rd
cb8fc9b6696c9fbb3259b8132e5d9bbb *man/plot_acbd.Rd
72cdf40b56e03d223a8ea2cb5d93e735 *man/plot_acmc.Rd
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116584458a48b48ad17aa7217335b28d *man/plot_hf.Rd
27bcc17388206c4aa027cf14a917b4ec *man/plot_metrics.Rd
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b4c1989e4eea493d2a711abbe7d631fa *man/plot_pca.Rd
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589fde66b9e958c588abf3cd9cd63467 *man/plot_pfnf.Rd
83c49050331bb2ba5adffad29895278a *man/plot_pn.Rd
66d31f4cf43e6fb83c9695f2a5252e82 *man/print.nacho.Rd
bd735787f61443a73f72703f24ff7bfd *man/probe_exclusion.Rd
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7bbe454525efebe9f7f0d42236529f06 *man/qc_pca.Rd
37a13fe7c1012ac4138c7834a0eaf9ab *man/qc_positive_control.Rd
5272a81a20d57cd5a18f194845712d21 *man/qc_rcc.Rd
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8c8ee21dc240e02bb376ba5f504fb3f1 *man/render.Rd
72eda65f900f42018a3b71a30a381d10 *man/summarise.Rd
103ab7196ae93b42bed57e901255abc8 *man/visualise.Rd
b9c4dfadd086018c4daa1457a5613cb9 *tests/testthat.R
7bd8b9739a66dc2a7ff7cb74f7f6801d *tests/testthat/test-autoplot.R
dc789a7ca595e676e655128eb48bd473 *tests/testthat/test-normalise.R
cf43fcedb6320ef0d967836e676693c9 *tests/testthat/test-print.R
8ad152d90ea22c5dc39270b6c1054e98 *tests/testthat/test-render.R
87472882046b568da34539481a7ca74f *tests/testthat/test-summarise.R
9f2d197497a3ed8fc9e4eb34792d3991 *tests/testthat/test-visualise.R
6cbaa4a976233a1a9f3bd39bc5731cac *vignettes/NACHO.Rmd
3c1eed7ad08d5552c80753c58556a315 *vignettes/nacho.bib
2a469db1311a22519d38d9a0fe15c046 *vignettes/nacho_hex.png
