# Generated by roxygen2: do not edit by hand

export(fun_analysis)
export(fun_homology)
export(fun_load_bam)
export(fun_load_chr_no)
export(fun_load_genome)
export(fun_load_mutation)
export(fun_read_check)
export(fun_save)
export(fun_summary)
importFrom(BiocGenerics,as.data.frame)
importFrom(BiocGenerics,colnames)
importFrom(BiocGenerics,mapply)
importFrom(BiocGenerics,paste)
importFrom(BiocGenerics,rbind)
importFrom(BiocGenerics,which)
importFrom(BiocGenerics,which.max)
importFrom(Biostrings,DNAString)
importFrom(Biostrings,DNAStringSet)
importFrom(Biostrings,PDict)
importFrom(Biostrings,countPDict)
importFrom(Biostrings,end)
importFrom(Biostrings,matchPattern)
importFrom(Biostrings,nchar)
importFrom(Biostrings,reverseComplement)
importFrom(Biostrings,start)
importFrom(Biostrings,subseq)
importFrom(Biostrings,substring)
importFrom(Biostrings,trimLRPatterns)
importFrom(Biostrings,width)
importFrom(GenomeInfoDb,seqnames)
importFrom(Rsamtools,BamFile)
importFrom(Rsamtools,scanBam)
importFrom(dplyr,"%>%")
importFrom(dplyr,arrange)
importFrom(dplyr,case_when)
importFrom(dplyr,filter)
importFrom(dplyr,mutate)
importFrom(dplyr,select)
importFrom(stats,complete.cases)
importFrom(stringr,str_count)
importFrom(stringr,str_detect)
importFrom(stringr,str_dup)
importFrom(stringr,str_replace)
importFrom(stringr,str_split)
importFrom(stringr,str_sub)
importFrom(utils,read.csv)
