87be64628cbd37d21447b3daa2eb489c *DESCRIPTION
f5ae625b4829811dfc403d666ca4ac8e *NAMESPACE
e89302276c7c6e400ddcd9af2cb4bf36 *R/AdjustMatrix.R
08e634387f7bd337975b26d4f024b8ce *R/Classes.R
4b8a05105bdebb97a5a221ab23fa1d5a *R/CompareMethodsNodeOrdering.R
31998c7aada7adf900139465a4795ce2 *R/CompareMethodsVStructure.R
bdd6b8d1d385cca188db626bb2d1d6eb *R/CutModules.R
127c72717e90aeb800ad6f279969a3c8 *R/EdgeOrientation.R
081d7ac9269afab015c97728a5cdf0ae *R/IdentifyAssociatedPCs.R
cfa5219aa43a28916526dcd471d131aa *R/MRPC.R
b2edca3b453ea2d7cf39c61eb7a65817 *R/ModiSkeleton.R
355dc6db63f79bb57c4794cd7a0fb80b *R/PlotDendrogram.R
9f21b117c2cd91be3d1eb6e525e341e8 *R/PlotGraphWithModules.R
ab5dcd6f793645efa5a0ecf97e43bf72 *R/RecallPrecision.R
5eb0174f189650b9cddd45da2359bcd8 *R/RobustCor.R
d18f79d53f46040e841c2a0914e36c2d *R/SeqFDR.R
b6f60154c3071f5d3ff1dc7201394129 *R/SimulateData.R
e2b1f329f56aa997bd03f557624ceb46 *R/SimulateData1P.R
2368d2e30db8f53c497e08402fe1e7da *R/SimulateData2P.R
44efaae532a7fa4d18eaecf0a93291c3 *R/SimulateData3P.R
90ca38a35df4a7393500997c9dd92a66 *R/SimulateDataNP.R
c15c9ef77d42b3924fc10589f3727070 *R/aSHD.R
7019faeca62c748ed44c269b282b1384 *R/empty.R
ba38adcd9e1ea7365085dda20e428e26 *R/mpinv.r
1df7ede1bf00623772dbfa2693ecdfe2 *R/seqDiff.R
e17d5bfb766771b4f07169804d8370f3 *README.md
498df0587b8d2b1db92a2bb89791eba3 *data/Data_GEUVADIS.rda
e3d6805ad692b2c9a8e4830c905355bc *data/MRPCtruth.rda
135a604c68d585825832756a817fb002 *data/data_GEUVADIS_combined.rda
0add230b7ddcd87a7be682b69ece43ec *data/data_examples.rda
a3045bf405e75e40a09d1a7e070f6192 *data/data_with_outliers.rda
b57db13333ab82d1eb68a6f8037f0377 *data/data_without_outliers.rda
ff9cbdc6b6913460ee46b43ed85a3248 *data/datalist
5c64b19ce1223d50311ee20a2d9b437f *data/simu_data_M0.rda
36e391fe6e409caca045dab7851a6cc0 *data/simu_data_M1.rda
ad3283b0b7f4c8a78bdf27c084365cad *data/simu_data_M2.rda
2eaf9a9616437822ed082bf1239b0489 *data/simu_data_M3.rda
c8a1f4f012cca0255b76cd3a49adbd35 *data/simu_data_M4.rda
2bdde4cb67110b0fe3c08a8d26ba792e *data/simu_data_layered.rda
b0c8a4f8622bd27533ac226c934d9f78 *data/simu_data_multiparent.rda
a165a4bbe0bc3df12bfc51f7ee1b5962 *data/simu_data_starshaped.rda
08dc2e9bec93a42ac18d3c7b55635911 *man/AdjustMatrix.Rd
1655b17c1a91cc45efe7a7f7d377b247 *man/CompareMethodsNodeOrdering.Rd
fb516c04b28a1ad0474b6a4ca92c6191 *man/CompareMethodsVStructure.Rd
e46c77df5f292cfcb0fbf4510e8fd3bf *man/CutModules.Rd
a32c08b1b01a649d144b0b79251d6ef7 *man/Data_GEUVADIS.Rd
5079a7a67685b77273b709e0fd6468ad *man/EdgeOrientation.Rd
2766e967d82fd690cbee98e696fcac8d *man/IdentifyAssociatedPCs.Rd
7c60715fd6406c9ee03c4a315750edf2 *man/MRPC.Rd
7acbe5c2536a6ee12a7bcbf21ab1fd6e *man/MRPCclass.Rd
4ec4ff4e3de46ec8b6ed894797122209 *man/MRPCtruth.Rd
16a6058edec69eef1a6df629bb09a739 *man/ModiSkeleton.Rd
f82f72aa68c7cac47549e1135d4cbc88 *man/PlotDendrogram.Rd
79ebf1edcb1e58d5d6331b59ef92af43 *man/PlotGraphWithModules.Rd
09fec14f061eeca95e11ae640fc2c4ba *man/RecallPrecision.Rd
fa31af77ccd8dc40d432ee9247ac7b71 *man/RobustCor.Rd
b1ca5f860833b4676a8c5c3156835147 *man/SeqFDR.Rd
4f3067a1585efcb60553740b2777a4f7 *man/SimulateData.Rd
41d61b85124ecc75e81a9a75aace43ed *man/SimulateData1P.Rd
4ef4609f131989bd7b873fba1e339cec *man/SimulateData2P.Rd
ecb45cffdc042f198d21d05a8fe1a938 *man/SimulateData3P.Rd
cdb816dda303934dc4477d1c57eadf90 *man/SimulateDataNP.Rd
98c8a09388fe46a94f6a0932eae96236 *man/aSHD.Rd
b5cd08198f039f1216f25c320ed94a22 *man/data_GEUVADIS_combined.Rd
9eda27b19920fd1aed2b835d46ed2e8a *man/data_examples.Rd
c56605777208af54de012282e48fdf87 *man/data_with_outliers.Rd
eb7313ab20f44f5cb3a35ca07199b93e *man/data_without_outliers.Rd
d66c09ebeb6d8f102ec58bc6379889ae *man/empty.Rd
b8ac265bdfa7f593c34f19e916c416e5 *man/mpinv.Rd
1522baf571ba7596367d3eac30f8836a *man/seqDiff.Rd
3de04a33e8bdf327cb458131975f16bf *man/simu_data_M0.Rd
bd85173695478ce6300b5d2373bf92b1 *man/simu_data_M1.Rd
8c768d228db1731307b9428c8734730d *man/simu_data_M2.Rd
8bd79a6c9b2eb8b26019671f06e4b37d *man/simu_data_M3.Rd
9507a4b048a8d24fc9973739033630ac *man/simu_data_M4.Rd
a93f7557881aab1ac1068247de202da3 *man/simu_data_layered.Rd
abcf372152b1fa7857b606c9836c8d6f *man/simu_data_multiparent.Rd
54e4282940d4bfde40dd8432af816887 *man/simu_data_starshaped.Rd
