75c8ba29d5106f630baa2a9ffcf00236 *DESCRIPTION
46b8426ef7c520f6f1df24dbc1e5df30 *NAMESPACE
91f8bd2bf61f3242386f0bedab924bf7 *NEWS
bba4a1a4ffe15e53058662e67163f1c4 *R/MPAgenomics-package.R
dcf391534fad4ea55d869aac58b18e77 *R/SNPselection.R
48921b9726c7dd344bb0d44f5a44c491 *R/aromafunctions.R
ddf3731f962a1bdcfa908571cea2edc6 *R/bivariateSignal.R
9c340cf110d7b3e3213d90e5c1559cf0 *R/cghcall.R
c450109ba23eeece0a6008307e77d1b3 *R/cghcall_preprocess.R
bd6d38fbedb712fd4ffa17aff65d4709 *R/cghcall_private.R
d8101ef727ceaa9d419757d5dbabce63 *R/createAromaArchitecture.R
26b4a14f597b2446005bcd11a33c584a *R/expandcghcall.R
894e2d3f50f31f54ad957aeadf9c6b24 *R/findPlateau.R
f8a7cc3deb7294337bac7c3e65cf26c3 *R/genotypeCalls.R
ce49df4ef9686d3fc0c9a76971b196e7 *R/getCNSignal.R
900689d83ec4050a3ced25ff54e8bf42 *R/getFracBSignal.R
93993545d9e2620dd10f1bc682c90462 *R/getGenotypeCalls.R
a03a7dd9c1b487606bf026c0d01f9408 *R/getSymFracBsignal.R
7fbb366ecb50243e4ee8beff99e5ca73 *R/pelt.R
ff05314282c596b288277c6fab3a75c6 *R/segCalling.R
eba61cea7ef4cdb697b88f4d94dc09a1 *R/segFracB.R
cf55556f26ebed4898889fe12ea2560e *R/segmentation.R
69f50cd8ec2bc75bd421f55f38c61ff6 *R/signalPreprocess.R
b3b9624a3db9de99606f7ffd212f21f3 *R/tumorboost.R
15223ef607657536b90f34042d824fe4 *build/vignette.rds
04be2b8fadc0256b60eb30a69f0c0653 *inst/CITATION
d189b4c70c15b6dceb302c608d75398c *inst/doc/MPAgenomics.R
3dde9c75b71a7392712bd9e80d6c5875 *inst/doc/MPAgenomics.Rnw
a236c27e9fb0155d1b098a909316c2fa *inst/doc/MPAgenomics.pdf
3471dd9e683798a44443bf619da757e0 *man/CNAobjectToCGHcallObject.Rd
264d849d2641c646f95bcc8c994e6839 *man/HDlarsbivariate.Rd
967a1c36b25e05d563cca23f000ddaee *man/MPAgenomics-package.Rd
2bc96c08de35d2307cb88c425194a204 *man/SignalNormalization.Rd
14677f19e2741bebc2b35bb25caf797e *man/addChipType.Rd
63a202a83a3c3523edc7374eebf5edd8 *man/addData.Rd
87ea9db74010859ea25f22bf1ba268af *man/callingObject.Rd
6a33cbff2e9daeefb92aeb6cae6dceea *man/callingProcess.Rd
0f96f59595c84608bc64af21cc9f28b5 *man/cnSegCallingProcess.Rd
7894b25581d1e094e8fa814d0f40d925 *man/createArchitecture.Rd
05a82d4ab590b6f9978884984ab6bd9e *man/createEmptyArchitecture.Rd
bbcb1a615a6bc26eb970e1bdf26a747f *man/filterSeg.Rd
9622e0287a74f8ddfa9dcf9e4e9a3b49 *man/findPlateau.Rd
df19d57c3f4043f6e0be895aa49f498f *man/getCopyNumberSignal.Rd
d4d52e1f39abbc8d125ce67af5095847 *man/getFracBSignal.Rd
884889b4f24798780b77d9fd69fefee4 *man/getGenotypeCalls.Rd
2399b2847b5314895419e0c75073923f *man/getListOfFiles.Rd
4d88d625b79b67f315aaefd01a7e6138 *man/getSymFracBSignal.Rd
875aef55617f1cb34795326a077e54c6 *man/markerSelection.Rd
6a48ae465a02bd6784860985a7f07a2e *man/segFracBSignal.Rd
859c5cf7a8ebcf996351ce8012d8d21c *man/segmentation.Rd
47023aff2d81be2397ad742d0ac4d149 *man/segmentationAroma.Rd
c61638dd476f3ca683fb80e59ced50b1 *man/segmentationObject.Rd
464b85fad57e089454e0279651f0053d *man/signalPreProcess.Rd
46336da0abac03fec7f2f689e45dcb8a *man/symmetrizeFracB.Rd
a09dbc08351c1d8a2a85a9a118f52e07 *man/variableSelection.Rd
3dde9c75b71a7392712bd9e80d6c5875 *vignettes/MPAgenomics.Rnw
9ed1dc7d11f774880daa197530b289fe *vignettes/MPAgenomics.bib
182881667e0c07d7cc2e22b5b1c83871 *vignettes/fig/callsoutput.png
9d00963850d9d157fedba02765f0e590 *vignettes/fig/callsoutput2.png
73db11cdf121f4b964d5b0acc0d3fbce *vignettes/fig/chipFiles2.png
96153a5134a89bbd49b9e09bde747f15 *vignettes/fig/classifplateau3.png
d294ed485640f19eb8256ccf801c0f83 *vignettes/fig/cvcourbe.png
10542bc868aa936a9a506ad19a97936d *vignettes/fig/dataFiles.png
acf8e19a47b663c58e9f3614cff4018e *vignettes/fig/dataFilesSingle2.png
c32b0aee4464f3b78ca782957073b5b9 *vignettes/fig/dataResponse.png
c4c4e425365185dcdcdf47622abb530d *vignettes/fig/decdata1.png
432c465a6f00a44d714cfb1c4cb8c150 *vignettes/fig/falsesel.png
cd7ef9c041cc5d4796f701dff7ae6af1 *vignettes/fig/fracB.png
1934b3c0cb5304284335b0e01912085f *vignettes/fig/freqdata1.png
0c1d006d73eb384baa91ac0d4cd7a1bf *vignettes/fig/matrixlabel.png
05a40458dae454eee960cc12a39a3ea3 *vignettes/fig/normalTumorArray.png
513c6d5fa918b0d3e4acd155440a50d9 *vignettes/fig/normalTumorArrayExample.png
fa50566a2bf234105ec8c699eb968d4e *vignettes/fig/normalTumorArrayExample2.png
a19f0fb7937fd513d2ec76e7536a8d53 *vignettes/fig/normalTumorArrayExample_2.png
5ace225dac077cd94fadc061e809ecec *vignettes/fig/outbedpelt.png
eb1745ffc49966fcd22bf01b221ccfcf *vignettes/fig/outpelt2.png
c35830e6cfe2ce3f453c770dd419953f *vignettes/fig/plateau.png
d87642cc4e07a9a25dead418a35b01a5 *vignettes/fig/plot1.png
feb0e3f64e5ae8afadfab6ab0825c1c4 *vignettes/fig/plot2.png
70051ff6ae6b02f150ce7c3bcdd9192a *vignettes/fig/plot3.png
6e87930b7351311f141a4e809884e742 *vignettes/fig/plot4.png
fdf92787f895cd2e2f6386386540b496 *vignettes/fig/segapresfiltre2.png
e143167d28cccf48040811d67769eb73 *vignettes/fig/segdata1.png
21f644a66b74266b03fc8177ca657adc *vignettes/fig/slopeheuristic.png
d92308d0b31b3684b4b45a1640f2ab3e *vignettes/fig/snpselectres.png
44042cd89eff9945b3c8155aad7babe6 *vignettes/fig/symFracB.png
38d2932c07358192bb0b6c24b8d39ba5 *vignettes/fig/truesel.png
