f6966d2eb391905750cbed8ee5d94352 *DESCRIPTION
082c4dc47b2e00ecd0008970327c7254 *NAMESPACE
165354ded0900c82533f533e1de9d371 *NEWS
ba222dd4b1fa157ba4a85945b300f77f *R/MPAgenomics-package.R
9d197079d84d6b14c70eac9dafed7b61 *R/SNPselection.R
128574a536c9b2c0f9c83b7fde2cc717 *R/aromafunctions.R
ca7eae4a18c3f772af765ee8df4b1b18 *R/bivariateSignal.R
57a9eb96286507be2aacda4205cd6309 *R/cghcall.R
c450109ba23eeece0a6008307e77d1b3 *R/cghcall_preprocess.R
e40d4161761ef3bf6c4a5e75becaa9fe *R/cghcall_private.R
76cf4e3064345baa9d82450c4a71bb55 *R/cghseg.R
99eb464354cd38a991b3029743882797 *R/createAromaArchitecture.R
bd27819381f1088fcfe77b4a2058419b *R/expandcghcall.R
5847d366aa1885ef7bbba96b78ff15e2 *R/findPlateau.R
019a0a7a69298575c5ce523ba995157c *R/genotypeCalls.R
05bf9944ed990b800b988b04f8a9da4c *R/getCNSignal.R
bb7022f3ddaf0776b09fdf844dcb6624 *R/getFracBSignal.R
716a348531776dd96a3307ff91f5a4f2 *R/getGenotypeCalls.R
4cf4b98521a83e8b4fb2265c9640c0e8 *R/getSymFracBsignal.R
20cfdf06e1d93a76369ca691d18e66ee *R/pelt.R
81c69b7507cb64240da6891f0d41d9be *R/segCalling.R
59b185e0ed789d0a2b7cb40dc1a708a8 *R/segFracB.R
6af64b6ff588b273519f0bbb3106ddc4 *R/signalPreprocess.R
702fc26010df0b9f43ed25487c651bfc *R/tumorboost.R
2b591ad12af5210be56c0c93ddf6c6fd *build/vignette.rds
d179139cd5d8414a538a6bb34b6155f7 *inst/CITATION
5306cc4e0c2b19c0d225e7e31eda1953 *inst/doc/MPAgenomics.R
9aba93e679617716096055b6ff834643 *inst/doc/MPAgenomics.Rnw
e04ae0d5dc4d170a0c45d7b56a82595d *inst/doc/MPAgenomics.pdf
2296ee1739f79508da87b622a4550d49 *man/CNAobjectToCGHcallObject.Rd
8d256c37beee589914a6ea93bb357b5e *man/HDlarsbivariate.Rd
45e05dc6a071b21f41822f2db1dd7a9e *man/MPAgenomics-package.Rd
2b28643cb3033b6324d2ba4635489d98 *man/SignalNormalization.Rd
b84e66dace4eb8dc791a3e7668bcb551 *man/addChipType.Rd
b734477319b72b6c74cfbd6e06497e47 *man/addData.Rd
be68a6c3b8a845c221cdc23c7a7ebf5e *man/callingObject.Rd
5f08bd83b5a1ed22684c60438efb838d *man/callingProcess.Rd
64fd85e0f4d74dfef6f845a55ea0e81d *man/cnSegCallingProcess.Rd
1d18b1600055c6e64e629846c3d785a9 *man/createArchitecture.Rd
432faad60c8a03f09393ffbf7b2d7911 *man/createEmptyArchitecture.Rd
4205f33dcf7a5e7631cf24c83a1049e1 *man/filterSeg.Rd
be30bf0422bad1b9a2dd0b0ece5f7000 *man/findPlateau.Rd
a605a47d6361e2329b5a817cfc810354 *man/getCopyNumberSignal.Rd
916015d2d2fc803cbd424b1733ce202a *man/getFracBSignal.Rd
3d94d77b059fe4e3dffbfa4273b94dac *man/getGenotypeCalls.Rd
2143f72190108ef4fca4afe4206de53d *man/getListOfFiles.Rd
6423bae9e713aacd8437f397d5ae9adf *man/getSymFracBSignal.Rd
24ee2f6c00f10d65ae48a6248f6dda75 *man/markerSelection.Rd
ae91681102d8bf9be547d94b5c8683ad *man/segFracBSignal.Rd
c82ba5b9c113e493daca2a83431d0281 *man/segmentation.Rd
eb473d941f35a11fc7d52991e102814c *man/segmentationAroma.Rd
ed5653f10a248e753cc94d46763bd80e *man/segmentationObject.Rd
dfd3e5e765b5f7cb8b90f346d45971f1 *man/signalPreProcess.Rd
f4f5e722a68f241d40684c258d670005 *man/symmetrizeFracB.Rd
738250a900a2ecbf0ac5c32836ebd70f *man/variableSelection.Rd
9aba93e679617716096055b6ff834643 *vignettes/MPAgenomics.Rnw
a8443e4e91473dd3b24cce37b2ae237a *vignettes/MPAgenomics.bib
182881667e0c07d7cc2e22b5b1c83871 *vignettes/fig/callsoutput.png
9d00963850d9d157fedba02765f0e590 *vignettes/fig/callsoutput2.png
73db11cdf121f4b964d5b0acc0d3fbce *vignettes/fig/chipFiles2.png
96153a5134a89bbd49b9e09bde747f15 *vignettes/fig/classifplateau3.png
d294ed485640f19eb8256ccf801c0f83 *vignettes/fig/cvcourbe.png
10542bc868aa936a9a506ad19a97936d *vignettes/fig/dataFiles.png
acf8e19a47b663c58e9f3614cff4018e *vignettes/fig/dataFilesSingle2.png
734b0dc013a372f8bce706227cefbb4f *vignettes/fig/dataFilesSingle2_old.png
1f3e3be79453e2a2f5d14da8194711c4 *vignettes/fig/dataFilesSingle2_sauv.png
c32b0aee4464f3b78ca782957073b5b9 *vignettes/fig/dataResponse.png
c4c4e425365185dcdcdf47622abb530d *vignettes/fig/decdata1.png
cd7ef9c041cc5d4796f701dff7ae6af1 *vignettes/fig/fracB.png
1934b3c0cb5304284335b0e01912085f *vignettes/fig/freqdata1.png
0c1d006d73eb384baa91ac0d4cd7a1bf *vignettes/fig/matrixlabel.png
05a40458dae454eee960cc12a39a3ea3 *vignettes/fig/normalTumorArray.png
513c6d5fa918b0d3e4acd155440a50d9 *vignettes/fig/normalTumorArrayExample.png
fa50566a2bf234105ec8c699eb968d4e *vignettes/fig/normalTumorArrayExample2.png
5ace225dac077cd94fadc061e809ecec *vignettes/fig/outbedpelt.png
eb1745ffc49966fcd22bf01b221ccfcf *vignettes/fig/outpelt2.png
c35830e6cfe2ce3f453c770dd419953f *vignettes/fig/plateau.png
d87642cc4e07a9a25dead418a35b01a5 *vignettes/fig/plot1.png
feb0e3f64e5ae8afadfab6ab0825c1c4 *vignettes/fig/plot2.png
70051ff6ae6b02f150ce7c3bcdd9192a *vignettes/fig/plot3.png
6e87930b7351311f141a4e809884e742 *vignettes/fig/plot4.png
fdf92787f895cd2e2f6386386540b496 *vignettes/fig/segapresfiltre2.png
e143167d28cccf48040811d67769eb73 *vignettes/fig/segdata1.png
21f644a66b74266b03fc8177ca657adc *vignettes/fig/slopeheuristic.png
d92308d0b31b3684b4b45a1640f2ab3e *vignettes/fig/snpselectres.png
44042cd89eff9945b3c8155aad7babe6 *vignettes/fig/symFracB.png
