c6a887f9ac7ef0d4fd70f9b0118ec020 *DESCRIPTION
ec955b542fcf6096a318175e145c97db *NAMESPACE
208e45e246931df756b5d96039975fc5 *NEWS.md
3931ca1a358f0a7963223794122780c8 *R/Cube-1LocusTA.R
35463b306a10a02c75ae6aac590cd960 *R/Cube-2LocusTA.R
8bfce56edb5caf9857a12917bd1fbc6d *R/Cube-Auxiliary.R
fe0af8aec80b04f5a511d1a13b191a5e *R/Cube-CRISPR1RA.R
4a87d8c739c0e7b29fa6fd19a95e416c *R/Cube-CRISPR2MF.R
0f694e38db1fd550c926ecbd90fedfff *R/Cube-KillerRescue.R
88229b6164d777e6d3e15e3d808f5e93 *R/Cube-MEDEA.R
ba42ffd613cdf70a3c1cad5e23a5aa20 *R/Cube-RIDL.R
2bca88808b6655ab582bd765a697f4bb *R/Cube-RecTrans.R
907e6f38e152923add7f44ee7f3470e6 *R/Cube-SMendelian.R
d2c1854b587dd63173e1c777e27250e0 *R/Cube-SplitDrive.R
df576e6201a00e9bbf4f024b93359153 *R/Cube-Wolbachia.R
2ef535dddc47f182554bf84fc11e77c2 *R/Cube-tGD.R
02eabd24dc16a5cc23bcee5833ed29d5 *R/Cube-tGDX.R
4e46ea86905af0126d374c7017092e46 *R/MGDrivE-Auxiliary.R
06d519cfb5bad8e010b72c201a48308f *R/MGDrivE-Graphics.R
35e2713389a7ea5cbf12a360f615c86f *R/MGDrivE-Releases.R
afa7e887db5ee52a893e203c2506a412 *R/MGDrivE-Setup.R
8bd1c3ea4f4871d918207aa11a95627b *R/MGDrivE.R
b7b28932f7e2c1c13657eed2a85d3b69 *R/Network-Class.R
d0c9d5f606247626a60d845bd6900463 *R/Network-Parameters.R
f085f2343a2d2519ab6260b94e811571 *R/Network-Simulation.R
572372265aa6f119798967bdf0dcd484 *R/Patch-Class.R
922230880dcb24dd6cd0cfa4b445b989 *R/Patch-Methods.R
f423c662366fe509d6a2cf574840b597 *R/Patch-Migration.R
b9d1b62f4a481bd2739c61e23c23acf2 *R/Patch-Simulation.R
11f6bf31a6845aa071aef9b5b16b5fd3 *R/RcppExports.R
baf2a63027e7d784a2e64c5910441c7c *R/data.R
6a4b18fbbfd73a8a9b08e43f62a8ce44 *R/zzz.R
8ee715c945e4d12f8521d268411ae0e2 *README.md
02f24df17dc8b86dbef9fb441adf23f0 *build/partial.rdb
d93c268e17987c208c301c3db997d8e6 *build/vignette.rds
39228ae9b06b3c1ae7f9a5c836e8634a *data/kernels.rda
749d2b032145ed3fbf34c79f73855af3 *data/moveMatAll2.rda
d77fe8fb07a734c26150bec0635b3aec *data/moveMatCascade3.rda
036eca9d2e5c64ac41f990e57728e81d *data/moveMatDiag.rda
b89038126ded89c387595e7ac13e228b *data/moveMatDiagOneCity.rda
181924774adf2d483b6f166ae67cae3f *data/moveMatDie.rda
f08970e2781c874db1dd53c1d7d8c054 *data/moveMatIndependent3.rda
7a7fd0b0d992edfed21df5ba50a0cf3a *data/moveMatMixedSpil.rda
349374cc0d220d2ca4dd73605ed27d96 *data/moveMatTaleOfTwoCities.rda
1808f2dc519c0d94c2ab2d89ceebc4e3 *data/moveMatTriDiagonal.rda
a119ca4fda39ae73eaa7b4d71cd52463 *data/moveMatTriple.rda
40aa3600328a4bb3a75e625308bc4f5a *inst/CITATION
ad8bb7dac6c18bbda30f0baa74aa9c09 *inst/REFERENCES.bib
ec3e2013c546e52aa27b53c92124f3df *inst/doc/mgdrive_examples.R
849c4de89bfd51de449629d438293ffd *inst/doc/mgdrive_examples.Rmd
4a8d3f1d34ca4f993718b0f8283fc51d *inst/doc/mgdrive_examples.html
e45bae16fff61e3c97d9b33ba6116de4 *inst/doc/mgdrive_math.R
912dc4c246bbb7cecba0165cbf4d4c11 *inst/doc/mgdrive_math.Rmd
7e940692f9293a042b2eba44dea78423 *inst/doc/mgdrive_math.html
baca8e892fa0fa26511b77eec8886b66 *inst/doc/mgdrive_run.R
fc3c17c95380b2f89ef81573485d2b4f *inst/doc/mgdrive_run.Rmd
5b8cfc3c2de1e30fafff75767f0f5ba7 *inst/doc/mgdrive_run.html
7eb4948e3a2465c4abcb9d9c06a8436c *man/MGDrivE-Cube.Rd
cce08662e9d986a6a2e48523323f284e *man/MGDrivE-Model.Rd
5b3f6ae4c77463f1407d2bbff17d988a *man/MGDrivE.Rd
c5b4832d36a24233ac1a37490772babb *man/Network.Rd
500c83828cc76f77e37996a33f10a0c7 *man/Patch.Rd
e0840642ad257bd2d6c3a31193697d99 *man/aggregateFemales.Rd
bea3c66978dfac02be1a1269a63f13e0 *man/aggregateOutput.Rd
bf3ff7aef47706dbeb54af73ec14600d *man/basicBatchMigration.Rd
2b76db92a0daf002099804295a1f9406 *man/basicRepeatedReleases.Rd
e62e01e7014c807351f1b6c547c0a968 *man/calcAquaticStageSurvivalProbability.Rd
86b8be7d988bc28843a5f4f4e3d58db1 *man/calcAverageGenerationTime.Rd
7cb960815241864eb29285f0683f02b8 *man/calcCos.Rd
4d3eff64b11f5ab25a5efbb44eeceb1e *man/calcDensityDependentDeathRate.Rd
afe3a1fd75b0cf99fff9953f11401766 *man/calcExpKernel.Rd
3cbd659513f986e6b6d51eea8359da85 *man/calcGammaKernel.Rd
273df8f11461612a366372fafe2df088 *man/calcHaversine.Rd
46bb4c17d395cb0c842820697c65bfef *man/calcHurdleExpKernel.Rd
a8f071a7c38b760dd004ba7ac367084c *man/calcLarvalDist.Rd
5dc6f4980d327bfc2f68de22bad9aebc *man/calcLarvalPopEquilibrium.Rd
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408e23f4e29d71e8b0209c0812254c81 *man/calcLognormalKernel.Rd
23fbc27d2ba8ee63c3d7b9f1297d6063 *man/calcOmega.Rd
d817df88fe748a04226be29127ea75b4 *man/calcPopulationGrowthRate.Rd
d6d71fe02ba199208fd9cb235c755a83 *man/calcQuantiles.Rd
12e6bbfdc7b80d794bbb1b6ea5df88ee *man/calcVinEll.Rd
32539e7dc4a9945a86d82041c7e83c66 *man/calcVinSph.Rd
4311ca0c02ea4158f3cade053d75f093 *man/calcZeroInflation.Rd
5f1305a0685855d239fc43d182c4cda2 *man/cube2csv.Rd
a3b17f0f16041e9422e44b9bb88aab4b *man/cubeHoming1RA.Rd
ad6f595405144338e0521980aa740d41 *man/cubeHomingDrive.Rd
63d36f1371c4514d93b122e3032cbe99 *man/cubeKillerRescue.Rd
1c9d561b0984fd37a7068311d681ad95 *man/cubeMEDEA.Rd
47e64db1219bc6300fa5a739a4ad4571 *man/cubeMendelian.Rd
eb5c6e38506f24ce6d02e1b297dbbdaf *man/cubeModifiers.Rd
83906a7279dbfb9490976c6cf5d1f846 *man/cubeOneLocusTA.Rd
b111f039c6ef3b6e1571bd23bd719370 *man/cubeRIDL.Rd
5a8e0d42fe2054e76a868348fdf6153a *man/cubeReciprocalTranslocations.Rd
eb936d2fd1dd9eecd7148c8c3af130d5 *man/cubeSplitDrive.Rd
138ace6391cc43f5a3ccfd67014d74cf *man/cubeTGD.Rd
1204035159d9d8db73ebd529b6cf4fdb *man/cubeTGDX.Rd
ebef169adf9be0ff1b9ffc9377429d65 *man/cubeTwoLocusTA.Rd
41069a93c625c74dfcfa30064d5b162b *man/cubeWolbachia.Rd
db7df5c533e47fdede3075a1eb5cda6f *man/eraseDirectory.Rd
7c942c13307ffdc1d5d95cfc1d13adc7 *man/generateReleaseVector.Rd
229d6ba4dac971a31bf1e2632066f083 *man/get_alpha_Network.Rd
65334dfad852c3cd9e986f8ba36a14d4 *man/get_batchLocRow_Network.Rd
17ad2ba999539c62c7345626e9fc23fd *man/get_batchProbs_Network.Rd
ee061023b05f469add5daf3dd0754f1c *man/get_batchSex_Network.Rd
05fd67838cb51c2d8066cf9bc38da494 *man/get_beta_Network.Rd
8df2c399a6fc54096c0bdd48aabbd160 *man/get_conF_Network.Rd
3b919d2feececc290629c6c697f27581 *man/get_conM_Network.Rd
2d3a8a3164623909c93c98123bb7c7f1 *man/get_drivecubeindex_Network.Rd
e32742f360b7c1951cbc9782c79b50bc *man/get_eta_Network.Rd
f0c9bbd06ab0edfa76c06b2374acfd69 *man/get_femaleMigration_Patch.Rd
bc1ad18f21333aee6687aeb3812f2005 *man/get_genotypesID_Network.Rd
ee0e0300bd587a9ffa6bad6a75a38f73 *man/get_genotypesN_Network.Rd
5b003f186d2dd685495688103c36d7fc *man/get_maleMigration_Patch.Rd
bcb435a33990c4e9578fea8ed254186f *man/get_migrationFemaleRow_Network.Rd
a32e82fc163ecffad72d16e1ddd515b6 *man/get_migrationMaleRow_Network.Rd
4fbef0c9c4a24d0843ed61b6273f6aa6 *man/get_moveVar_Network.Rd
e6e1962b80fe05dff64c29119aa73ca3 *man/get_muAd_Network.Rd
00f81447836a2e7236656ca507866661 *man/get_muAq_Network.Rd
4ff17d5bcd08cf3b0f26cd487830af86 *man/get_nPatch_Network.Rd
61f43f97b90fd782b83afcc42a54c8fa *man/get_omega_Network.Rd
1d845da5707ed7697644036b891491f6 *man/get_patchReleases_Network.Rd
2d603040a92c10985e11a1bd50e997cb *man/get_phi_Network.Rd
1dc62ddf81988ea9bf478b01b1d6efaa *man/get_s_Network.Rd
3e384144d47284be10499fe9a80569e5 *man/get_tNow_Network.Rd
3de89920431a170c4870cffc26598ee4 *man/get_tau_Network.Rd
4434569714330416aa7ab97fea81db7d *man/get_timeAq_Network.Rd
0378c3c9c1f96cf85efd34458866e075 *man/get_xiF_Network.Rd
42c8fbff52dc578ebb33aef70870b252 *man/get_xiM_Network.Rd
627b714634c11068856a84af5ae16a79 *man/ggColUtility.Rd
23e9c72cf4a0d8099697d47846a0d036 *man/kernels.Rd
5dc1a28aee050e2ff34c898cd2018849 *man/moveMatAll2.Rd
05eb27622a8586da42fafe31a6da88bd *man/moveMatCascade3.Rd
fa1e65458b7b3dc46e2d725a6713e0d5 *man/moveMatDiag.Rd
3fdcbc0746ea516d01408c27b2547341 *man/moveMatDiagOneCity.Rd
651c9e4dbad896f654e8f2893ef84364 *man/moveMatDie.Rd
1587c229ff4d08678a492cfb7d56bfea *man/moveMatIndependent3.Rd
673df021952dc81dc4d692fe8b41144a *man/moveMatMixedSpil.Rd
3369c2ff9081e1e0fb3e40c9421e4124 *man/moveMatTaleOfTwoCities.Rd
3743c182c5218a5fd956cb9765eb20b6 *man/moveMatTriDiagonal.Rd
633c201878462b688ca3d3af44957e89 *man/moveMatTriple.Rd
07815ddff3ed1189cd3ec8792bcc1198 *man/multRun_Network.Rd
e22362c7edf2338da6a2c3b728db6bdb *man/normalise.Rd
3220f0469cefd3bd7b86e93b96df5253 *man/oneDay_Migration_Network.Rd
8814efb5c07347df05cd1eedfce91645 *man/oneDay_Network.Rd
3c42a19524c3171d85aefe56a72df6e3 *man/oneDay_PopDynamics_Patch.Rd
102cb29fba2dcd02042ea7976549bfa8 *man/oneDay_adultDeath_deterministic_Patch.Rd
610b4d16b1fd41155f16478e302d9603 *man/oneDay_adultDeath_stochastic_Patch.Rd
217dfa43abb17aff1484b265f3e7644c *man/oneDay_eggDM_deterministic_Patch.Rd
6265f4add278f066fee4f1d95b168311 *man/oneDay_eggDM_stochastic_Patch.Rd
4aefc513b6f3c2d3b34ad7241a85f260 *man/oneDay_eggReleases_Patch.Rd
a832a9ed0bdc51a68baa0ffe8ed21101 *man/oneDay_initOutput_Patch.Rd
089706e9fd310bcf52a26d34c0496c7a *man/oneDay_larvaDM_deterministic_Patch.Rd
d1473977bf6f1c95c4f76583c0da8e53 *man/oneDay_larvaDM_stochastic_Patch.Rd
b571e8c91e680f63ff1bcc0c2f43f927 *man/oneDay_mating_deterministic_Patch.Rd
dea4bbf35ec2c8d9a3ef5bc0ae1a16da *man/oneDay_mating_stochastic_Patch.Rd
658fc920e103491b1a5869482c23c4b7 *man/oneDay_migrationIn_Patch.Rd
dd1597e7034fde938c2c90bf0149481f *man/oneDay_migrationOut_deterministic_Patch.Rd
7f7067bc4c2fd27d858e86cb828b2907 *man/oneDay_migrationOut_stochastic_Patch.Rd
1694c10a5b10ee308da0922d75d4445b *man/oneDay_oviposit_deterministic_Patch.Rd
754a5ffb4094097e6b1da6aca352b2bb *man/oneDay_oviposit_stochastic_Patch.Rd
9bf0b473338d88d3a9d66e4771b99a40 *man/oneDay_pupaDM_deterministic_Patch.Rd
49d52e76e4d7e009b10b8a3fe7c5fd57 *man/oneDay_pupaDM_stochastic_Patch.Rd
108afffeedcd0984b2f2a6efed2a55dd *man/oneDay_pupation_deterministic_Patch.Rd
ca82eeff4bb3c3299428410424e1e7a0 *man/oneDay_pupation_stochastic_Patch.Rd
fb01b2d9fbacedaa247ea86bc7b246cb *man/oneDay_releases_Patch.Rd
0bec8055fd126aeecd08fc66d9c35e52 *man/oneDay_writeOutput_Patch.Rd
794b8f82aaff7c794a786c85d31963b5 *man/oneRun_Network.Rd
b66d3b5d2b5901e9dc24b5e62b9f3245 *man/parameterizeMGDrivE.Rd
23b8e52e7be6e72d141265d216c68ee1 *man/plotMGDrivEMult.Rd
2ff659473a3de390a53cdcc5b5864ee2 *man/plotMGDrivESingle.Rd
cb21dc162b40d7a09de844f9c2013184 *man/quantileC.Rd
7e1c5322032173ed756179bc588d7beb *man/rDirichlet.Rd
0a359a12e66a5103bcc0c4d82e752930 *man/reset_Network.Rd
d86e5ede037d3052be24d59d66dcc0bc *man/reset_Patch.Rd
9e4b0c77e63a90cb2682880d717473bd *man/retrieveOutput.Rd
afc4d1ec29fed23a5333bd5c5ca87f56 *man/set_NetworkPointer_Patch.Rd
5b6c1f7b3af58044032450edf3b40d3d *man/set_initialPopulation_Patch.Rd
5591f856e3595d7740cb789a683d2bad *man/set_population_deterministic_Patch.Rd
bdd87f92873796c726504c2666e820c0 *man/set_population_stochastic_Patch.Rd
27cd61185074cfabdc3a7e1fadab3980 *man/setupMGDrivE.Rd
a5102933ac4a41e4560931d87285e350 *man/splitOutput.Rd
e4e7ddb5f6cef19769a4a8128a23143d *src/MGDrivE-Auxilary.cpp
672b1736218234e9c902cb186b3213b2 *src/MGDrivE-DistanceFunctions.cpp
563bb9d29715e3abc531404ad63242f6 *src/MGDrivE-Kernels.cpp
7491342a83b5337968e36a0bd5449e88 *src/RcppExports.cpp
4d8d067eaef70654f31a8c9b2471fb58 *vignettes/diagram.jpg
849c4de89bfd51de449629d438293ffd *vignettes/mgdrive_examples.Rmd
912dc4c246bbb7cecba0165cbf4d4c11 *vignettes/mgdrive_math.Rmd
fc3c17c95380b2f89ef81573485d2b4f *vignettes/mgdrive_run.Rmd
