49a5baff425ebee13762d44fbef8346c *DESCRIPTION
d899fd9a07c3dca0d878ea6eef6e21a8 *NAMESPACE
6f1be3f3d81cb65dd16faba3a8369148 *R/RcppExports.R
adaa64ee8c02c4c9dd557620de4efa2a *R/amh.R
a00c690c2b0f3d1078bb3e9c74e3bdf9 *R/amh_compare_estimators.R
77714e85ad6e22619ac9dd561b50f277 *R/amh_eval_priors.R
7729665807fdc72418368a4ce3b7977b *R/amh_ic.R
e10f48136bc41925c9e0ec0a72d84b93 *R/amh_init_acceptance_parameters.R
7b3b57e1fbfe40d91bb4bc7174a1942a *R/amh_loglike.R
69539b5bdb6426fc93681fb113fcce12 *R/amh_posterior.R
f7068bc398d2a825237588879236f6c9 *R/amh_proc_methods.R
f7ce7fd4becdb37df8c19f9ff3ada281 *R/amh_proposal_refresh.R
e8a3fd13719fd4ba0cf388f786840108 *R/amh_sampling.R
82df86895cfe50c1e97b4bed05c10089 *R/clpm_to_ctm.R
d2ffc5765217a2fe8805a4483d47a327 *R/clpm_to_ctm_drift_to_paths.R
618102e6611af9bfae50af68ceeb03d3 *R/clpm_to_ctm_estimating_function.R
95ea1f0092f925de30160f1c1d85bb87 *R/clpm_to_ctm_paths_to_drift.R
bf81711dc0cac670e9427d142b2aa515 *R/coef.amh.R
af57708fa9beeba893df54602b89cc7a *R/coef.mlnormal.R
797177e571bc4a8075b5fb919fad67c8 *R/coef.pmle.R
1bdc7c7169e6123dd93889f82128b5f3 *R/confint.amh.R
ee8d54f09f70600699a0a73f52462a80 *R/confint.mlnormal.R
4d53baae212d5a2ab5f17319ab908edd *R/confint.pmle.R
ddc21c95fa3ecdf27b1e4713f6f10f9f *R/lam_add_increment.R
637eea1d5bced122f40c47353ac80b84 *R/lam_moving_average.R
f75fb09ee80cee13b480a9f7926474ff *R/lam_vcov_linear_trafo.R
32781c7cb5aa8bd51a4db8d33d0f8202 *R/lam_vcov_to_se.R
f97b03af06d038776d1033b20f497cd6 *R/logLik.amh.R
7d9302ad44fdc4173377d6ab386836ea *R/logLik.mlnormal.R
367e00134bd69e979f67ff5b97ce1425 *R/logLik.pmle.R
19240240ea0a3d21610231974d6015d7 *R/logLik_lam.R
ca4eb6ec2ea24aec2a7e159a7cd51175 *R/loglike_mvnorm.R
20eee8c8b430fe82246d5ce85ed361ed *R/loglike_mvnorm_NA_pattern.R
b89a19849ef1dd4464b1a12c31df56d6 *R/loglike_mvnorm_NA_pattern_R.R
c65680e15cab24ec65bac70c1b6a1048 *R/loglike_mvnorm_R.R
f179accebe4ecc55f8bca8dbc454c95f *R/mlnormal.R
75d3268810f055877ce59debe1979d7b *R/mlnormal_abs_approx.R
c0718067a12b09b958ee33b85e028cb7 *R/mlnormal_adjust_numdiff_parameter.R
1897f54767e39d9a77a73fea476bcf58 *R/mlnormal_as_vector_names.R
e64bedc0d7d78bb721e000668be74518 *R/mlnormal_check_matrix_list_difference.R
01182b3ecad76628d4b402c08541048c *R/mlnormal_covmat_add_ridge.R
452660245c45b6bac2e302c5072a05f9 *R/mlnormal_create_disp.R
ff577d33871b781600444b5c0caea8d5 *R/mlnormal_equal_list_matrices.R
6083dbe2e638d6324c82995708242ca0 *R/mlnormal_equal_matrix.R
575d837b460ac5330e9a6c49a00f3b53 *R/mlnormal_eval_penalty.R
edeb73d8bd8843acf512e3f0389e6f0f *R/mlnormal_eval_penalty_update_theta.R
51c4872a21ecfd1a5f577ee74c27e276 *R/mlnormal_eval_priors.R
caacaa15f5f623fb6cdc3ebd6627bd0a *R/mlnormal_eval_priors_derivative.R
f1a5f88923463ba64c497e486fedb157 *R/mlnormal_eval_priors_derivative2.R
2882d98f1df35240caeb8643042041ec *R/mlnormal_fill_matrix_from_list.R
b782c704197584c8fe57d69d80ab6bea *R/mlnormal_fit_function_ml.R
c453a6da238f4e8cd5328e4775606c5c *R/mlnormal_ic.R
6f77673e4534262c0d218bbc766da0c0 *R/mlnormal_information_matrix_reml.R
1af7b19065c56c8d4cd9f253112071e7 *R/mlnormal_linear_regression_bayes.R
e2a4b238e54f8f3a18ff45b4fc6ad970 *R/mlnormal_log_2pi.R
111e3d5b754b1fe89312b9276dfce446 *R/mlnormal_log_det.R
ffca3f40f7dde89535f9719bf0ce2a52 *R/mlnormal_matrix2list.R
fb421959601b3325c7da06a7489a640b *R/mlnormal_parameter_change.R
a78cb9599ad485ddee2c3a28b43af1a1 *R/mlnormal_postproc_eval_posterior.R
80e56aa70e98c1c6df9541725cf08b68 *R/mlnormal_postproc_parameters.R
42097a07856019ea29b7a9234f35e6c0 *R/mlnormal_proc.R
93118fb644314d4a7468ad5523c3e210 *R/mlnormal_proc_control.R
a65f73e78198a252787f79dbfc514c51 *R/mlnormal_proc_variance_shortcut.R
af65f66042d626d0d8c0498c3536c150 *R/mlnormal_proc_variance_shortcut_XY_R.R
f5458ec0a508a43b9d29f691f880b715 *R/mlnormal_proc_variance_shortcut_XY_Rcpp.R
169bc0d66b56343a9abccf63c184658f *R/mlnormal_proc_variance_shortcut_Z_R.R
537456ea7450c985cb0e13eefd50d0ef *R/mlnormal_proc_variance_shortcut_Z_Rcpp.R
cca38ef9c53b8ac6e8d38737ebe894e3 *R/mlnormal_process_prior.R
995c4c95ec7f91c9a23df3cee988dbe5 *R/mlnormal_soft_thresholding.R
43567a614ce6738fd4cb71341374e636 *R/mlnormal_sqrt_diag.R
ca543fd5bec76cb1e892681447e8bc47 *R/mlnormal_summary_round_helper.R
65476d556d954d2799bcf8ae32b23dc6 *R/mlnormal_update_V_R.R
aef1c703efff2cb4c16086195bac1863 *R/mlnormal_update_V_Rcpp.R
892328ac82cc546f907cf027a8a6cb38 *R/mlnormal_update_beta.R
9b39262bc0d1c29c49e8c383bea01ac5 *R/mlnormal_update_beta_GLS.R
c011ede272d902b52a6adb4aea3a067a *R/mlnormal_update_beta_XVX_R.R
2357e47cb691458b7b79cd8b9696c60b *R/mlnormal_update_beta_XVX_Rcpp.R
b89f82ff8a02af8b1a7682e6d8d0cae5 *R/mlnormal_update_beta_iterations_penalty.R
237d1559ccfb45fcd8e0b58f41e10765 *R/mlnormal_update_beta_iterations_priors.R
16440abf54c700104d3a86886e611a70 *R/mlnormal_update_control_list.R
2ad1932fd6962f89482ab3b36e2d68bb *R/mlnormal_update_ml_derivative_V.R
4096cf755b155778c6be2638802b0cbd *R/mlnormal_update_theta_ml.R
bf1ad56f89969d462f516eaf2920a11d *R/mlnormal_update_theta_newton_step.R
1ee25d8730268daa75db72a2e8fbd4f1 *R/mlnormal_verbose_f0.R
1d48120f0587b791afc66210e1526f58 *R/mlnormal_verbose_f1.R
73169e03e5aaf296153df919ec32b461 *R/mlnormal_verbose_f2.R
235ac9920af4451bc188af7cacbb187e *R/plot.amh.R
d2c84f407414c02314bf109fbc791e9b *R/pmle.R
6ec1fe7d8db3b9c14cadcb7032d23503 *R/pmle_data_proc.R
ee18992cb35ce2acaaa19b7b0e85b1bc *R/pmle_eval_posterior.R
47fbc4416ccc495482243e5da6a82a31 *R/pmle_eval_prior.R
fc04b0eb7c2c4dd913470846e449574f *R/pmle_eval_prior_deriv.R
01e332319a4c8ae022583e51d1e79606 *R/pmle_ic.R
56df4840f103fc119a33dc66464515dd *R/pmle_prior_extract_density.R
8c265579cd3d1e786af0f8eca793b857 *R/pmle_process_prior.R
f28462e48676556d6d705f5afcb4b179 *R/print.mlnormal.R
884cf90fed51e423284ed930d8902dbb *R/suff_stat_NA_pattern.R
3242fbaa38fd28f063e7684304e82327 *R/summary.amh.R
b135b5f718db0ccdff76a3d263bf0d24 *R/summary.mlnormal.R
7351f2061ed863801641bf6be72a2a3d *R/summary.pmle.R
ce3dcfb6547643bc86dac172d85bf94b *R/vcov.amh.R
23bc663f4bd111d6f6d8d2cc49f86a8b *R/vcov.mlnormal.R
64becc14be30ec756501e43c0757a5ea *R/vcov.pmle.R
205f2152a2456083d6ee8f1af88af2b2 *R/vcov_linear_trafo.R
7b602578c905eae1f02994ad9a20939d *R/zzz.R
2d67840ceddeb861285ae3b004b668c4 *README.md
6df924bb776066522a881bf3cc2c3c7d *build/partial.rdb
8473b7faa3c5d13350985eaedaf3faeb *data/data.HT12.rda
7c3bdf002ae42a867a09845f9fd786be *data/datalist
45a94a5899c60a94c5e14bad970c3438 *inst/CITATION
3521bd8d619f87c87766f156c0c282d8 *inst/NEWS
94a78958c60ae03eca36085c03028250 *man/LAM-package.Rd
b3320b4ea85627afde09a47d9da6b136 *man/amh.Rd
4cb1a6326f5446ddfd2292f0508c9035 *man/clpm_to_ctm.Rd
94c1b5b6d2643604bd91711eca244806 *man/data.HT.Rd
bca13ca20749a5367600d35484cfa978 *man/loglike_mvnorm.Rd
1efc7e28e6ff7ee6a0c03d25c7aafbe1 *man/mlnormal.Rd
90c0378f0c01d0709f5580c9c41292f0 *man/suff_stat_NA_pattern.Rd
3900e4e4b505787e0f3cb83ad8ba2138 *src/Makevars
36dc26a5d3e080089104b503a783361f *src/Makevars.win
95358bc93196d43b8f429135f5d0b1d9 *src/RcppExports.cpp
fc268f15a1cfe4efc915f26b84cb578a *src/lam_rcpp_loglike_mvnorm.cpp
7bf8570285e59dd477a8aede479dc10a *src/lam_rcpp_mlnormal.cpp
