3651ebe34210a85c8dce9b42fa9bd210 *DESCRIPTION
e9e8805afc5faea652dbd8c28014ef7a *NAMESPACE
d6926b9eb6dbfa560c8d36a864049c33 *R/H.longAFTWB.R
d6c3051b1dbe83b5156431a7e82e2444 *R/H.longPC.R
2cd3f690e175a06a33cb5996ab9761ec *R/H.longSplinePH.R
301f20272a3b4ed0851af3352843ad03 *R/H.longWB.R
8938ece8e61be02ccad28e92f4358ca2 *R/HessLongPH.R
bece17f00ce151ae6c5e2e11ab7bd853 *R/HessSurvPH.R
d6934ed692b3eab389ee4754fa227d0b *R/LogLik.phGH.R
0f2bcac9d27cfe81fff988c01219fa75 *R/LogLik.piecewiseGH.R
3e32663d9060dacc58a3d186541de0b1 *R/LogLik.splineGH.R
b18000c3cf17272e7ccb66378e1733d1 *R/LogLik.weibullAFTGH.R
c10217e75dbfe6f16a48042eb24ce9d3 *R/LogLik.weibullGH.R
31ba44ebc7f2b6d9089cf913d7b29b28 *R/MI.fixed.times.R
59ba2a087e54e678fcda3a3f87059fcf *R/MI.random.times.R
54f6c42951a1224ef5e33d5943804289 *R/ModelMats.R
de9f503a8ee7e146fa9260fa3558318e *R/S.b.R
555e7a3094fe5f629c5c1eeff4c88622 *R/Score.phGH.R
9721286fbdb8676f2bac35abf078c3b6 *R/Score.piecewiseGH.R
c01c4fb94879b24472d6285a2c4793ad *R/Score.splineGH.R
2fef7c4ff2c2e063905ed3464ac2e06a *R/Score.weibullAFTGH.R
2cf07df77d4e56497567276767b1af20 *R/Score.weibullGH.R
8a0e8d79edc2c6a571d59f7e3abb8081 *R/anova.jointModel.R
e119c8ce46cd7beb710c4d6248451217 *R/aucJM.R
e1367fe8756c878cf3f8ee425b6c71be *R/aucJM.coxph.R
d8780d798fda21f06b6648f1054da173 *R/aucJM.jointModel.R
6897769056ca8c4f63f85cfa485c68f2 *R/cd.R
cff54f1e39bef0fe9a8570ad18ad15e2 *R/cd.vec.R
91e2a9efb7fbb2261607b63fa63e4c3c *R/chol.transf.R
d0da064e58d904934536d9bb676d5dd7 *R/coef.flexCPH.R
d768541a8f1c1bbacc538ea535bf96b9 *R/coef.jointModel.R
e704973ad8b38b9e6533424dd426974f *R/coef.summary.jointModel.R
9978a61503fbc70d88fb138934e228be *R/coef.weibull.frailty.R
9eb8be8c47fc266cfba350124aef215a *R/confint.jointModel.R
cb091a3e5af3b85e8a2b1f37a44603f5 *R/crLong.R
11c37c0922ea69b7f772ba452b258f3a *R/cumHaz.R
93946a719364cc42162bd816d9ad1e42 *R/dataLM.R
1b1f76dfecbcc612cbb7ed378d1c3f7c *R/dbs.R
33c8a58011fd085e91250fdd520f9417 *R/deriv.D.R
595828ddb6df85d2eae3814560b6d5a4 *R/dmvnorm.R
3ce16926841bbd66d164555737f52871 *R/dmvt.R
ec70ce5797bd1b260141886cad6bf329 *R/dns.R
26156f8e3c7503117268a23b2b54efee *R/dropAttr.R
98df0886b9a81ca886e06cad7f3e6025 *R/dynCJM.R
dde50198b28372773f1f28440d196308 *R/dynCJM.coxph.R
780c1559b2f31923b171603d81d284d5 *R/dynCJM.jointModel.R
212dace46812fc2a1f18def363075436 *R/fd.vec.R
121bfcd746bb2c619379ccd9ca8e107b *R/fitted.jointModel.R
f0eb1843ac4a1b88313771da89bdb23b *R/fixef.jointModel.R
706d553aefe05a121113f364124fa15c *R/flexCPH.R
6e8a6c41eeec8761a757784d5da0fc90 *R/flexCPH.fit.R
68e5bb985c10a7b3da74d86666c81730 *R/fn.R
cbfa62598f06e077feba39764f02fd87 *R/format.perc2.R
e8ccf8dfe5c050b865359b5225f12cc7 *R/gauher.R
96af64cfd3068cc77425bbf00162628e *R/gaussKronrod.R
9dff241d7bd43568bb0ca07c3f8e2f86 *R/globals.R
621210755c1db9387fde1ad2603136e8 *R/gr.R
5350d158c8bba9ece8922f9925358157 *R/gr.longAFTWB.R
a21edfef654d399e49215fe6a0046de4 *R/gr.longPC.R
642c2a17ba01cd54de0f91cbd4aebc4c *R/gr.longPH.R
f3a79d75ec71533bfe8f3a6a6580363a *R/gr.longSplinePH.R
69846f8bb50689ee999a59a4f121bace *R/gr.longWB.R
b10ba7d4fc688d39abbcf548ab7ff098 *R/gr.survAFTWB.R
f3a478300a53147c4bad86170cdbb32d *R/gr.survPC.R
1e8547f5a78cb9102485c7100dcc6508 *R/gr.survPH.R
1e61f62996d751d4ff07cd18bc877861 *R/gr.survSplinePH.R
928155b5c34631ef580fcf8740e381c5 *R/gr.survWB.R
88a1ba8fd2ecbdb83f2fec51bee3e515 *R/ibs.R
a6ca9dca7b310910a0b4e7501d09587a *R/initial.surv.R
829079aebf928cb92d491024dd9b4af9 *R/initial.survOld.R
1e0fdd67a2861f880379e2c5881ce855 *R/ins.R
c6e0e50fd82c80d29ed73f13fb349117 *R/jacobian.R
0188ccda479c187c7837a990e8c09825 *R/jacobian2.R
b521f1e83a262a95cf510611000be238 *R/jointModel.R
e71d7a3bfa2f092e6531c1840c8bcbfe *R/log.posterior.b.R
7031315490de8bc5970f212bcac18a14 *R/log.posterior.b2.R
a0cfe19f4b972219215cc5fe0d3cc974 *R/logLik.flexCPH.R
7f68502298b3836a2d7c4a66b0bb1ea5 *R/logLik.jointModel.R
c176a3f6ce2a19bba1314deca6a0b4e3 *R/logLik.weibull.frailty.R
0e9dba68386b7b23e35828fedb66a542 *R/makepredictcall.dbs.R
2a71fd5823ed4c0dfa57b8b8e4538654 *R/makepredictcall.dns.R
c2ff4b5f46ee601dfe59a06ef4c53a65 *R/makepredictcall.ibs.R
be10618a0627ee5062d4819d29824e60 *R/makepredictcall.ins.R
aa9f1ce2e5e9d128ac814bb52fe33060 *R/marginal_coefs.R
1c4222d9fad445daffb30394fe2a5b9e *R/nearPD.R
1d2875bdada10c5bb1c107c82bf1d7c0 *R/opt.longAFTWB.R
742dd67f7f40480d148d0d45bce0ca4b *R/opt.longPC.R
ae049d5914fe190eaec21e19f598a4a5 *R/opt.longPH.R
a9204be23a561126fe85ea66deb1c4f7 *R/opt.longSplinePH.R
d25a7720fc44557d4c574fb81026314c *R/opt.longWB.R
336608566a0d30ffde6f92ddace867c7 *R/opt.survAFTWB.R
47ded52eece140488b103d0e868aa321 *R/opt.survPC.R
7a112fc47a4cddd9900eaa2b4d5a3166 *R/opt.survPH.R
a0d986a277a142ab8b31e26e613a7546 *R/opt.survSplinePH.R
4cf3c2f813e0dce6fb7f7898353ed50e *R/opt.survWB.R
3c6ee90c87b5ee29a458b9bb09995c4d *R/phGH.fit.R
5749de57f4bd5c9f3d212c17e1603706 *R/piecewiseAFTGH.fit.R
a34bf0d3510c5c611bd1e12512d2ce39 *R/piecewiseExp.ph.R
de47ea69b6ec0c1916b7baf350daa90a *R/piecewisePHGH.fit.R
6f88c2ac9828bc87d9718916535c753f *R/plot.flexCPH.R
34796cad03e3c6bccffdfae34dba6b45 *R/plot.jointModel.R
b0b7971797a4d8c826c42aa3a3bf6a5e *R/plot.rocJM.R
1c5055fa95f34e76e25e2550e0a097b8 *R/plot.survfitJM.R
ea95a5e5730b6c4629197b6806cca3ae *R/posterior.b.R
7dfb47273da4f597e351dded97f83db4 *R/prederrJM.R
91177baab201630047b6fa476e858612 *R/prederrJM.coxph.R
8ba37c58724f74af7955b99c6e45e3b0 *R/prederrJM.jointModel.R
d64ddae10d18e3893f62fc34f3ccd579 *R/predict.b.R
acf1faf1c35fd5f1ae22ae25e66eabbd *R/predict.jointModel.R
425bcb183809d8e34d94b967fd14ef04 *R/print.aov.jointModel.R
35d6deae482410678b621f28bd909f05 *R/print.aucJM.R
ec79261cd95e7160df1af7e153b0abf3 *R/print.dynCJM.R
ab6f9679f0776b6289ba468f4e350e7c *R/print.flexCPH.R
dfed249f560ce7463eeace1f9595cdc4 *R/print.jointModel.R
9c8dfd5dd1a8c00fc528876e97d7dc70 *R/print.prederrJM.R
da694fd66e1a44c9ddb0895e7bf076ad *R/print.rocJM.R
51d7326ea8ad904c1a2083a3c24acff1 *R/print.summary.flexCPH.R
77d3c8e422c7ec41cedf4d20518e5d4c *R/print.summary.jointModel.R
01126bb04312b1319d4467710d8528fb *R/print.summary.weibull.frailty.R
39b476f474a9877924183e3fd785caa0 *R/print.survfitJM.R
674aee3cdf4ec87180507d5706f9ac55 *R/print.wald.strata.R
6d93dfb11024e17da94305b349dffd90 *R/print.weibull.frailty.R
65827b9814166e7f5ab7c31cdb331e05 *R/ranef.jointModel.R
5b524f33cb3e75847bcd4f2381f87299 *R/residuals.jointModel.R
caac54f5106e403eee10bd23a31a2751 *R/rmvt.R
423c4eb4bd29bc9bfd13859bbd913df8 *R/rocJM.R
dac7da2beb0c4490490bc11fd897fc9d *R/simulate.jointModel.R
5558636c99c3d8e80f7f626259bf2641 *R/simulateJM.R
f63d5162a97891b8bac2be8a75c46806 *R/splinePHGH.fit.R
31086838bb99d3d3cf26a8a36787a61c *R/splinePHLaplace.fit.R
c529f4b8590efc60ecb5d36ec2a02dfe *R/summary.flexCPH.R
031efab9e37f5023941490855b1f17b5 *R/summary.jointModel.R
3f85e12d2afdd35859dbe008ce63712a *R/summary.weibull.frailty.R
8175c76baa2bda8517e8902e14fbad3d *R/survfitJM.R
946ee1944fd0dc3a7f3afa4e3d346b99 *R/survfitJM.jointModel.R
ff5fe0dfe6161e01f9db4d524110f9d0 *R/update.logLik.Laplace.R
ca09c0ae039762a1b5d4f67b42beac5a *R/vcov.flexCPH.R
8d9cdf4a939d767278075c985255f7e4 *R/vcov.jointModel.R
e8dad4f9308e9a5e878ae231fe48c616 *R/vcov.weibull.frailty.R
b25df9779c45273f18d84359266fa233 *R/wald.strata.R
effa25e221b384caa1f2794696bdea38 *R/weibull.frailty.R
619f628e2e9487fffd009fc53f69d1db *R/weibull.frailty.fit.R
dd0158de59a51dba8e82e67ba9b2e72c *R/weibullAFTGH.fit.R
c00fcb00b384d9c6ccde38e911ea0769 *R/weibullPHGH.fit.R
51ff7167eadb3bef105fd976e75187b6 *R/xtable.jointModel.R
5433e4fe3f37781ae6aefedf7c42ab34 *README.md
955cd93e495b219052320c36b59c5efd *build/partial.rdb
588a3a19bfd432291cf5055298857216 *data/aids.id.rda
4107b3274b78cf0f85272e43987c68ac *data/aids.rda
6e0cb47a61d002890cdd2df486337cc1 *data/pbc2.id.rda
b029c468978a4f5ba719cb92b47fda8b *data/pbc2.rda
f7c8fef1286b366a987a3a00006dd24e *data/prothro.rda
951c92660aa1ebb23b8b81849b040fa0 *data/prothros.rda
c8c0837dbcabb6b9827e100defbb3909 *inst/CITATION
b8fc78dd21cc6e9fec3cc56370ad80d8 *inst/NEWS
a4db323c7bb11eec729797d31119bdf6 *man/DerivIntSplines.Rd
c06be0a0ef8a44a6ee5aa7ab99d76c6c *man/JM.Rd
120fd1e7d71847d3f257d7f85336c8e8 *man/aids.Rd
495f607c3f5a0787d746bbcfa6dcad40 *man/anova.Rd
e26ea75baae9ef70e471c80bd4ab1a1a *man/aucJM.Rd
d8a7f99ee6b08f40ab527784356b2ad6 *man/coef.Rd
da0cfa7c57792ce95de5151fa3917d6d *man/crLong.Rd
4d59e3d04e081c2b4f222f893c898bd5 *man/dynCJM.Rd
ae9871ea591cc54ef260fbf6c0540a3b *man/fitted.Rd
c12cb93b2bb262858f8a2526348226bb *man/jointModel.Rd
56e4e511e1a6857414bd419155a660c6 *man/jointModelObject.Rd
e8974afafd109e02a44430fdbee24f92 *man/pbc.Rd
d4ef1c20fbb7e6dfcaba1a1202092ff6 *man/piecewiseExp.ph.Rd
32ee5c23db470337589edc6323b3b0e7 *man/plot-rocJM.Rd
f06611f7f6e8990157b093146c3f22de *man/plot-survfitJM.Rd
4516cc24f052830f093fc50d805415e6 *man/plot.Rd
8078f4db8586a0ff298b0053bc41d2dc *man/prederrJM.Rd
e51b14cd21fd4739d40ae9bba4d92f05 *man/predict.Rd
fc08671715beac9808c4fd8ed275e057 *man/prothro.Rd
2c25dcbbc162b9b0cec4f5ee569c9c3f *man/ranef.Rd
c0a36ed3cbeeaf16628557fc5ed02c85 *man/residuals.Rd
8c929e7dd2d9bd9fa68a933d8d14e948 *man/rocJM.Rd
3d515c8ec10761898614b3f8b3acdb9b *man/simulate.Rd
12c3d476fb8549725bb514df28f27bd7 *man/summary.weibull.frailty.Rd
1ab5c1a9704604176dcbfc7739302d66 *man/survfitJM.Rd
0ce9f89bc83409c0c312c991d753dace *man/wald.strata.Rd
824244aff0454a7a8e631c54707a6f1a *man/weibull.frailty.Rd
8d0a320edd7b80b1a3e6b6407c3df4e0 *man/xtable.Rd
