e971e8a7d4cd38b1284293603301204e *DESCRIPTION
98bef4dda8679dea362e9f3829a3667f *LICENSE
c25d714752b93543eb3b305c272d546b *NAMESPACE
9b624aad3fa025247f7bd16004dfa6d7 *NEWS.md
58aa8545b7699438725e92ab0b974b26 *R/ICBioMark.R
25c7ba5a8f28cb3396e99b2d1585c557 *R/ensembl_gene_lengths.R
45af827d0de1f8050ab3ae6f6d360d8c *R/example_data.R
6a5a8195f6ffa567dd9c889267193559 *R/gen_model.R
59a3e44305354f4432a69fb1420132a5 *R/generate_maf_data.R
02703cf1ee286e975dd97044b58de774 *R/maf_to_tables.R
fd6e29134c8b999727c6ee328637a4ca *R/metrics.R
338fff689f7418de8b769fcb5b1b8d69 *R/nsclc_data.R
75170307054a2f804fca69b095146b29 *R/predict.R
bc800cabeef3a250edc9719927bbfad6 *README.md
28117a9325330ad91824db17991d6d51 *data/ensembl_gene_lengths.rda
2b1c5ebcb0ed0f1af3d70efa1692070b *data/example_first_pred_tmb.rda
a9e9cfbdb7c1ef4aec58ae4cf71b90db *data/example_gen_model.rda
4aad0308e3899057dd8fd45c24805e42 *data/example_maf_data.rda
ea87b0b51db9ae5e99ce766ebf106603 *data/example_predictions.rda
0f0d15f142e1629a1ba5bed89684b426 *data/example_refit_panel.rda
788b0b6cf451192e6e3214ba254982c0 *data/example_refit_range.rda
86706c22ee7d590fca28afd14e0248f3 *data/example_tables.rda
24280fac749572366ed9987aa3c760ed *data/example_tib_tables.rda
695259528d2666339f2fe9f2f57755ab *data/example_tmb_tables.rda
1900cc3e27c4f4be7eca79e75f6ac77b *data/nsclc_maf.rda
fc387a7accb9214479e32907b75da03d *data/nsclc_survival.rda
3b96d9cfd42e7a637006bd7c2a215d39 *man/ICBioMark.Rd
a8bed8743252b40583f1d8e2c39586e0 *man/ensembl_gene_lengths.Rd
11ae4cfe32877cd6b1930a6ef4b05d41 *man/example_first_pred_tmb.Rd
c2b967c66adcb4adbaeda2ec13f0afeb *man/example_gen_model.Rd
01ad33fb10bf76c04689ae61ba0e200c *man/example_maf_data.Rd
cb96b1e45352778c64721813529f64f2 *man/example_predictions.Rd
b04e4efb6ac58a2f9d4733ccae773b47 *man/example_refit_panel.Rd
f4d7ce75414c48a2f1ae48759caf88ca *man/example_refit_range.Rd
96445427828539cc9fbda2f7c1be6bdc *man/example_tables.Rd
f2529eadec641ab195eaddcea5834025 *man/example_tib_tables.Rd
554d4599eb7f81a2a0100aef206391ed *man/example_tmb_tables.Rd
9e3842ee9dc2d6d91c73b21cd519edf0 *man/figures/README-example_gen_model-1.png
918a5d0da720322ee929f05af918700f *man/figures/README-example_predictions-1.png
bceb7b6cbe9e56e3a62766cc609b508a *man/fit_gen_model.Rd
ad42469b384aeff436d7df27c079ec9d *man/fit_gen_model_uninteract.Rd
f136520b536581aaa8a4da947073b7b2 *man/fit_gen_model_unisamp.Rd
37dd8102137976c6a7f312a486a55dfc *man/generate_maf_data.Rd
f6c0117f02c544357dea298203d9cfd8 *man/get_K.Rd
2bb989fa5055fad7faef19c05a97010c *man/get_auprc.Rd
fe71f79738b31977d90fd84c99e85caa *man/get_biomarker_from_maf.Rd
4beb1d5049d89e8cb3a084836effe292 *man/get_biomarker_tables.Rd
c33257113959fa2c6be902fa1efb3798 *man/get_gen_estimates.Rd
b74ef853608a7ab623253b4f64efca7c *man/get_mutation_dictionary.Rd
41abdb2626bce3ae685f8679cb9e2f5a *man/get_mutation_tables.Rd
55d1d1545410905e872006959faf0362 *man/get_p.Rd
7a310c07d15625a946f37cceb3116433 *man/get_panels_from_fit.Rd
51b6c69137cc28bdd83fccabb2076f83 *man/get_predictions.Rd
e9eb678ec7f157bff63ba5804f352d40 *man/get_r_squared.Rd
8250b518c999070aaab209e0b867c24a *man/get_stats.Rd
987828c2bee62a04b5755d64329025e3 *man/get_table_from_maf.Rd
aa5229f60069918898504e85a27f0854 *man/nsclc_maf.Rd
48014c60a3bff50788867fb00f094b6b *man/nsclc_survival.Rd
dd1d2fc73a883c3c0b777ef37a3ba52d *man/pred_first_fit.Rd
b0cda23e10a68fa59332ff9bdb838536 *man/pred_intervals.Rd
b450b8e749dc2bc93d8cdedf68292957 *man/pred_refit_panel.Rd
814415f718c752d097c2170d12bb5e43 *man/pred_refit_range.Rd
f44f672b4a65653e350d22ab4c59f2b3 *man/vis_model_fit.Rd
652780185c10f5c89a5899f77913174a *tests/testthat.R
d41d8cd98f00b204e9800998ecf8427e *tests/testthat/datatest_table.rds
324b71093e9eeb29950f0daf6d9821ef *tests/testthat/test-gen_model.R
503cccf3e1ac76de3ad343b7566f992a *tests/testthat/test-generate_maf_data.R
0cfdd107ff65dd851c262622ad676094 *tests/testthat/test-maf_to_tables.R
6f6641947b39384f7af421a7caf64f0d *tests/testthat/test-metrics.R
00f67968a97344a3590d99483ead57a4 *tests/testthat/test-predict.R
