8733e09e246c87a22b477a45942fdab3 *DESCRIPTION
dcd7794cc30749a8e98c5f4fd2e640fb *NAMESPACE
e060b55a99190a28e17a7e428d857aa7 *R/KEGGfunctions.R
50595d0aec93d54581a55d40fc1a63c5 *R/QTL.R
150adb28252868d1718c2c4985f8de02 *R/aaa.R
f5da57b85d01bbddb000c6537a66b07e *R/cWrappers.R
621b6cbe727e9511508d66cc2b366d11 *R/columnLabels.R
ce5703ea93c2aea819166dafc745a4a6 *R/eqtl.R
21009935f42530f364a703c709b61971 *R/eqtlDir.R
c199554e4119b76ed663c738f246b9e9 *R/eqtlLM.R
e3306f780b0dc907204b9e2a8698ac12 *R/genotypePlot.R
9b8509f487a23bf7c8c92851f079385a *R/getRSLocation.R
6cff11747fcc502e77cb5c558f2724fe *R/getRegionsOI.R
b7721cdb291117682bc10e2fabc74500 *R/getSNPlocations.R
d6fc94e86741072206beb4f365e2ccfb *R/gtfToBed.R
47a15ed9a50f7315a869e8a43957089f *R/importGFF3.R
ac0950ec7e98245a11fee661043a204e *R/importGTF.R
eac9374e0e7ebd6c3a4825ca083b61a7 *R/importPED.R
5d4820e1cea17a37c854b6016d12e73b *R/importSTARLog.R
3ac62a8ef60de0c7d85d856dbc31da9f *R/importVCF.R
be957a7f1be11ee162b61cec6068469b *R/joinEQTL.R
86980ab926c8e35e5e7cbbcc4aebc2c9 *R/joinEQTLsig.R
ffdbb6cf43b168cc29d0d3b3b0a18b6b *R/makeannotList.R
c9f58db3bb53b6d1a9d29b51af846ee1 *R/mdr.R
d558332c7dcbfa4b366fa1d62a6168cb *R/mdrEnsemble.R
5996409eff30a94214851a222a0d0960 *R/plot.eqtl.R
db11833d328bdbdc0bcba3474caac383 *R/plot.eqtl.trans.R
172462b923d18e639033a877bf48c794 *R/plot.mdr.R
bfe09801f0f356815c0226017e0adc0a *R/plot.qtlRes.R
cf139d73a324c8f4be0b807ee9c650e4 *R/plotGeneLocation.R
9e0040e969d90a6e5fc48b4e64777818 *R/predict.mdr.R
b632af7e2a82e11472f33fa0e7c5f906 *R/print.PedMap.R
6b669b6d64fac5cd5b8c71fc6c720775 *R/print.eqtl.R
b926e4f95ba8b9ca6b6175620df63875 *R/print.mdr.R
91ef0980e6032d3c348154098131722e *R/print.mdrEnsemble.R
f4b050f686f3756a79791bddd4e4bbe4 *R/print.mdrPredict.R
61699496bc1e0940a2e8687f704ef1a1 *R/print.qtlRes.R
4dc33ff0e3782a9d77bb026d5ac98f6f *R/print.vcf.R
44e7369a388cbc6c35e0f8c9dd270c2a *R/rearrange.R
90b068fc137d749e1f96fac5596589e2 *R/recodeData.R
cc608cf00c4b1da87835f6c68d0436e2 *R/summary.PedMap.R
56d9399d1de234d02f2405d42b77e62f *R/summary.eqtl.R
8e2a39329d8601337c27ea286ddbc472 *R/summary.mdr.R
76730bc1f3b89162709edef3c361ed4e *R/summary.qtlRes.R
ffb40e151715128794488dcc7ec2ca54 *R/visTrans.R
e11a93f2ceb10e16feda261dfebb4cc2 *build/vignette.rds
c6c02033a140395102838d69d8ef509a *data/annotTrack.rda
15f4e218e22a88a580c25db7f4958135 *data/datalist
2035aa14db640822a784547407ad9cca *data/geneEXP.rda
03f7ffd257f8a1435c70dff5bce49886 *data/genotData.rda
1cd28260613b3a33dbae70ca9dc8836a *data/mdrExample.rda
8cb73a103b18090825a5ecaa3b9ae9d6 *data/phenoData.rda
b439ba27704ce9fdd597e35d6de0a130 *inst/ChangeLog
83d9fc4e38d848fb5bd7e51b647d10cf *inst/doc/GenomicTools-Vignette.R
8e064be21104700b4b049edb05d8297b *inst/doc/GenomicTools-Vignette.Rmd
2aed5423c256bf8181c233407b71e289 *inst/doc/GenomicTools-Vignette.pdf
e418a2c6d69640c7e1c9b614e13d3782 *man/GenomicTools-package.Rd
247f132caf5d76df3b5e4f929a38cde8 *man/QTL.Rd
780a84b46751d71399275686f23a6d90 *man/annotTrack.Rd
2d77b75c424f7475e8fb9cb71b4a8a6d *man/eQTL.Rd
62b7931526557f862abaf2a4c2307443 *man/geneEXP.Rd
78cc22c74470651d43117e263a1bbe3e *man/genotData.Rd
e4081ccf916fa21072ffe330a1d15d6b *man/getKEGGOrganisms.Rd
606c73a3516e170ce3b78e14ca08a488 *man/getKEGGPathway.Rd
a29ca55582d6bcfc656f318ca79085d0 *man/getKEGGPathwayImage.Rd
33fdce9344d840adce489bebb943938b *man/getKEGGPathwayOverview.Rd
a04f618209eec3561c031d2da2f9b6dd *man/getRSLocation.Rd
e8e2bc9333ccb4340c7ac21c8232dfb2 *man/gtfToBed.Rd
39d656720cdd9c3eb58d470332a25956 *man/importGFF3.Rd
015284076e562728cfd37d9418d973b2 *man/importGTF.Rd
9b4e13aa596ad1d9ab2f5b4e5e62c39d *man/importPED.Rd
c421ad1e43b0cc18a0125f1b219fe861 *man/importSTARLog.Rd
51f002e7df14745f5f2c6265a268921f *man/importVCF.Rd
3a1eb690bc20d6d1824ff9ec3bc8ce31 *man/mdr.Rd
07ed3294b79d637c4bbfa18ddd547804 *man/mdrEnsemble.Rd
0e54d07c8cbd5916b5a8d89501c41830 *man/mdrExample.Rd
4bd070a3086ae2cfffc25a038511dc0f *man/phenoData.Rd
45629099981a92b0ded1484d3e729fec *man/plot.eqtl.Rd
d32b06dc88441aed96c3e69928f5aa74 *man/plot.mdr.Rd
919c000e4f6c1459c7716c782065232e *man/plot.qtlRes.Rd
58f48a6b31add749c8ff1c1ce589fcf8 *man/print.eqtl.Rd
2eaf045ddc0ed2a0cda7d2278d95aa49 *man/print.mdr.Rd
c299ce342c986ae9cffc37dce82552fa *man/recodeData.Rd
64cbc40e834acb5a664ee91909634934 *man/summary.eqtl.Rd
95a5e0dc5dbdec9c251c142cb4cad286 *src/Makevars
2a33ba1c4b4b0d46d9ed823230c620e1 *src/Makevars.win
ab35b35c35578b594b81ea042d2712a3 *src/RegisterRoutines.c
f6f0af5d6d2abffde49cd503459afde0 *src/mdr.cpp
8d64417297ba8c94dcad36f310bd7c7f *src/mdr.h
9cfd40128a6f7847f56c451b74bbd202 *src/timeCluster.cpp
7e111957e1619917a515787c7ee875d1 *src/timeCluster.h
8e064be21104700b4b049edb05d8297b *vignettes/GenomicTools-Vignette.Rmd
9a5abbe0386a0f0f51982a9d9165eae7 *vignettes/GenomicTools-Vignette.bib
29a28e4bb7ab3334592638a5abd3d599 *vignettes/MDR.png
fae2bcb1e3bfcf20675bf3fc620c3a7c *vignettes/QTL1.png
d5f56fdd035e4f427cd7d3fb2651b93e *vignettes/QTL2.png
a0e03ea606280ca1795fbdb80e1d6d50 *vignettes/cisEQTL.png
7ab25cfd0e263c0c294d8db97d195096 *vignettes/transEQTL.png
