5fbb0c84147604825b48e2b55b74073e *DESCRIPTION
2ab3b0bacdd724937de7a271462867bd *NAMESPACE
50595d0aec93d54581a55d40fc1a63c5 *R/QTL.R
f266dbfc03be84ebb62debf894baf9ff *R/aaa.R
f5da57b85d01bbddb000c6537a66b07e *R/cWrappers.R
621b6cbe727e9511508d66cc2b366d11 *R/columnLabels.R
ce5703ea93c2aea819166dafc745a4a6 *R/eqtl.R
21009935f42530f364a703c709b61971 *R/eqtlDir.R
c199554e4119b76ed663c738f246b9e9 *R/eqtlLM.R
e3306f780b0dc907204b9e2a8698ac12 *R/genotypePlot.R
6cff11747fcc502e77cb5c558f2724fe *R/getRegionsOI.R
b7721cdb291117682bc10e2fabc74500 *R/getSNPlocations.R
d6fc94e86741072206beb4f365e2ccfb *R/gtfToBed.R
47a15ed9a50f7315a869e8a43957089f *R/importGFF3.R
69954fb1e0436c2321683707c3c34d8d *R/importGTF.R
eac9374e0e7ebd6c3a4825ca083b61a7 *R/importPED.R
5d4820e1cea17a37c854b6016d12e73b *R/importSTARLog.R
3ac62a8ef60de0c7d85d856dbc31da9f *R/importVCF.R
be957a7f1be11ee162b61cec6068469b *R/joinEQTL.R
86980ab926c8e35e5e7cbbcc4aebc2c9 *R/joinEQTLsig.R
ffdbb6cf43b168cc29d0d3b3b0a18b6b *R/makeannotList.R
56c7e86a8d815a861dc1a32b962eaf51 *R/mdr.R
d558332c7dcbfa4b366fa1d62a6168cb *R/mdrEnsemble.R
5996409eff30a94214851a222a0d0960 *R/plot.eqtl.R
db11833d328bdbdc0bcba3474caac383 *R/plot.eqtl.trans.R
9124891934681490a15fb75d6d626efd *R/plot.mdr.R
bfe09801f0f356815c0226017e0adc0a *R/plot.qtlRes.R
cf139d73a324c8f4be0b807ee9c650e4 *R/plotGeneLocation.R
9e0040e969d90a6e5fc48b4e64777818 *R/predict.mdr.R
b632af7e2a82e11472f33fa0e7c5f906 *R/print.PedMap.R
6b669b6d64fac5cd5b8c71fc6c720775 *R/print.eqtl.R
948b6ec81da15162f0b538ae524fcc5e *R/print.mdr.R
91ef0980e6032d3c348154098131722e *R/print.mdrEnsemble.R
f4b050f686f3756a79791bddd4e4bbe4 *R/print.mdrPredict.R
61699496bc1e0940a2e8687f704ef1a1 *R/print.qtlRes.R
4dc33ff0e3782a9d77bb026d5ac98f6f *R/print.vcf.R
44e7369a388cbc6c35e0f8c9dd270c2a *R/rearrange.R
90b068fc137d749e1f96fac5596589e2 *R/recodeData.R
cc608cf00c4b1da87835f6c68d0436e2 *R/summary.PedMap.R
56d9399d1de234d02f2405d42b77e62f *R/summary.eqtl.R
8e2a39329d8601337c27ea286ddbc472 *R/summary.mdr.R
76730bc1f3b89162709edef3c361ed4e *R/summary.qtlRes.R
ffb40e151715128794488dcc7ec2ca54 *R/visTrans.R
be73c043ee954831b69c1c0c7b452bb9 *build/vignette.rds
0e7d06b94995c966fbeb117b07b9a65e *data/annotTrack.rda
15f4e218e22a88a580c25db7f4958135 *data/datalist
fe71e56b3cfd9475e6259873b707df83 *data/geneEXP.rda
ee4365cfb69d9fc86e9f04158e0199b9 *data/genotData.rda
882c97c2640ff7ed02034a5e643e5cae *data/mdrExample.rda
4f0b67aea65d2686ec8ac79ad3b03c22 *data/phenoData.rda
ab2c30414795e94ff1dc8310f02ca11c *inst/ChangeLog
857995d124f654a1409d9353d8e6867d *inst/doc/GenomicTools-Vignette.R
554009970ca65c5e3e65cb54073424c6 *inst/doc/GenomicTools-Vignette.Rmd
774668d5462f89fa16dc990997f91069 *inst/doc/GenomicTools-Vignette.pdf
d4011e6a40ae0544a56059163d59d0b8 *man/GenomicTools-package.Rd
247f132caf5d76df3b5e4f929a38cde8 *man/QTL.Rd
780a84b46751d71399275686f23a6d90 *man/annotTrack.Rd
2d77b75c424f7475e8fb9cb71b4a8a6d *man/eQTL.Rd
62b7931526557f862abaf2a4c2307443 *man/geneEXP.Rd
78cc22c74470651d43117e263a1bbe3e *man/genotData.Rd
e8e2bc9333ccb4340c7ac21c8232dfb2 *man/gtfToBed.Rd
39d656720cdd9c3eb58d470332a25956 *man/importGFF3.Rd
7d6b40fd9b650cfc1d7a7fc1248e9f97 *man/importGTF.Rd
9b4e13aa596ad1d9ab2f5b4e5e62c39d *man/importPED.Rd
c421ad1e43b0cc18a0125f1b219fe861 *man/importSTARLog.Rd
51f002e7df14745f5f2c6265a268921f *man/importVCF.Rd
e85f9319db801d82d2ef77868e84a250 *man/mdr.Rd
07ed3294b79d637c4bbfa18ddd547804 *man/mdrEnsemble.Rd
0e54d07c8cbd5916b5a8d89501c41830 *man/mdrExample.Rd
4bd070a3086ae2cfffc25a038511dc0f *man/phenoData.Rd
45629099981a92b0ded1484d3e729fec *man/plot.eqtl.Rd
d32b06dc88441aed96c3e69928f5aa74 *man/plot.mdr.Rd
919c000e4f6c1459c7716c782065232e *man/plot.qtlRes.Rd
58f48a6b31add749c8ff1c1ce589fcf8 *man/print.eqtl.Rd
2eaf045ddc0ed2a0cda7d2278d95aa49 *man/print.mdr.Rd
c299ce342c986ae9cffc37dce82552fa *man/recodeData.Rd
64cbc40e834acb5a664ee91909634934 *man/summary.eqtl.Rd
95a5e0dc5dbdec9c251c142cb4cad286 *src/Makevars
2a33ba1c4b4b0d46d9ed823230c620e1 *src/Makevars.win
f6f0af5d6d2abffde49cd503459afde0 *src/mdr.cpp
8d64417297ba8c94dcad36f310bd7c7f *src/mdr.h
9cfd40128a6f7847f56c451b74bbd202 *src/timeCluster.cpp
7e111957e1619917a515787c7ee875d1 *src/timeCluster.h
554009970ca65c5e3e65cb54073424c6 *vignettes/GenomicTools-Vignette.Rmd
9a5abbe0386a0f0f51982a9d9165eae7 *vignettes/GenomicTools-Vignette.bib
29a28e4bb7ab3334592638a5abd3d599 *vignettes/MDR.png
fae2bcb1e3bfcf20675bf3fc620c3a7c *vignettes/QTL1.png
d5f56fdd035e4f427cd7d3fb2651b93e *vignettes/QTL2.png
a0e03ea606280ca1795fbdb80e1d6d50 *vignettes/cisEQTL.png
7ab25cfd0e263c0c294d8db97d195096 *vignettes/transEQTL.png
