4357a4af60d2e62f4a6c230bbb522140 *DESCRIPTION
f7b4c2b596ce35589354ad0134c9af45 *NAMESPACE
b2f4e89b1319854af49cecaf15fa299a *R/ClassMeths.r
1fa7a21a62cdc433785f6e5b6fc34173 *R/DLM_input.R
d71d5b91e03a914ecb5447c42057beb8 *R/DLM_output.R
dfbdfbad648bc7681523eafe830dba2a *R/DataObj.r
e0167fef99baf5636c381557834af8de *R/MSEObj.r
d262327d4dc155d8df706be5ad1dc421 *R/MiscFuns.r
2990266e2d8fe77b36fee13e6959d77d *R/MiscInt.r
5ffabb953930033b71cb2a1b78c62a4d *R/RcppExports.R
9ad8e977a4fbff2fd614bd7ca40dc381 *R/XLloadfuns.r
bdb1243ae85d47a16b8aafc4e3a1ac9f *R/runMSE.r
6c67de7206f3bd66206a29415b1ff658 *build/vignette.rds
9c21a2542f0bfa40a570f2f3f7b34c34 *data/DLMdat.RData
a015adc8f4c031512cd752723b0f1aca *data/PorgMSE.rda
71f5658888940cb69140f204c5dfcc7c *data/SnapMSE.rda
5a038bbbf3dc499a568762c087b0f5dd *data/datalist
c4b7808eaccbfc695e2bf0d865728b35 *data/ourMSE.rda
7dd60323b7ae750800b99c146accf1fb *data/ourReefFish.rda
13b7dc09e976806bbfd6e781e4bb342d *inst/Atlantic_mackerel.csv
276fc115f85899f534b963f841993129 *inst/China_rockfish.csv
28f36819cea0b425dc77df68e14e5065 *inst/Cobia.csv
a2ab49b1d0e325d8b5d836288632108d *inst/Example_datafile.csv
f73d273890ee24a4b1127e83851ff8fd *inst/Gulf_blue_tilefish.csv
880c0f0b44158200b52743cbe8ad3453 *inst/Red_snapper.csv
861ece053b05d44436a1e311c237bb92 *inst/Simulation_1.csv
9af555921110079a6e6ed2c2f894f717 *inst/doc/DLMtool.R
04f456221721bc313a264373748036c9 *inst/doc/DLMtool.Rmd
ef8b929506d2a1eacf8439184474deb5 *inst/doc/DLMtool.html
0607d97e8e5a77ec5fb72f5894dc6d3c *inst/ourReefFish.csv
1dd1fba958730749fb72a300894486f2 *man/AvC.Rd
9ee34e00d3c29441deb7cfd8b7ece615 *man/BK.Rd
e3eb969eac283b790523fa1608944015 *man/BK_CC.Rd
77975f77ab54f9a082d9533420a91b5b *man/BK_ML.Rd
3d3c0b4a40b42805a5a41f38bbaa4963 *man/CC1.Rd
60b02367c562f9368b24ef209eeb3f9a *man/CC4.Rd
54b1bcad45ef3435fdd70557a95c51a4 *man/CSRA.Rd
dab4ed773176bf94dfccf252762c0039 *man/CSRAfunc.Rd
31ad26507861c8d644c862713a56f75a *man/Can.Rd
4c953471f6320435c8b8d4ea0a21bda5 *man/Cant.Rd
044c071419af9bf1b4255eaa63870368 *man/CheckConverg.Rd
362d432fa2fe57f5d61b6a89e336157a *man/ChooseEffort.Rd
0373e05e49959c6511018c507ed9316c *man/ChooseSelect.rd
c762348e9c2913a9bfa38939381409e8 *man/CompSRA.Rd
dd556a3fd1c79208643efd4bfbe27842 *man/CompSRA4010.Rd
2662cf47839b2115ae779bf00a55fd11 *man/Cplot.Rd
2c2d4ce8df92b25c4d20868d4995ce80 *man/DAAC.Rd
3f97489739a4777474cf5d7cfa43f0f7 *man/DBSRA.Rd
129a75d64deb77b57dcecc48e9a532fd *man/DBSRA4010.Rd
ed0cdeab2fab8d92cdcbb4457e507c60 *man/DBSRA_40.Rd
e23ea50a67dcdd24e7ccd4c8bb967e2a *man/DBSRA_ML.Rd
3ea9ef2aad4a9127fbb630bbfbaf1f40 *man/DCAC.Rd
a8e79d26d3568ae8a9a24ea4866c053d *man/DCAC4010.Rd
20ddf4072fccca1e90b84da8bc1f5fe1 *man/DCAC_40.Rd
cef16e4f92710b8c2f099615397bcd6d *man/DCAC_ML.Rd
e4c25bd4eff2670b1fd319cfa5a16c4b *man/DD.Rd
6c2bec1ab1edf02c2a4e964163d761f6 *man/DD4010.Rd
3a09f06f96ae4e9b2915a2f9c0fc2cd8 *man/DDe.Rd
90f95c4a780d5435a89fee009c2bbef5 *man/DDe75.Rd
3a9dcf7e7f466a330388d0698a9b23f9 *man/DDes.Rd
f9f3a6d4475ed80bd7dee6dd6d35dee3 *man/DLMDataDir.Rd
84875964477e3d90705e1fd75be8a867 *man/DLM_data-class.Rd
a764ff484c8d084ea8b35a1a2a317a81 *man/DLM_fease-class.Rd
ea74a90121e800f897648c761b0654d4 *man/DLM_general-class.Rd
7fefb5c5fab87885f9358bc4937e7fd1 *man/DLMdat.Rd
bbed2f192260a31d26ef917a8b9403b9 *man/DLMtool-package.Rd
529d9e9b87a7009e4a27262dbf2b03c6 *man/DOM.Rd
bac14c8f3c7138c5c9ab948c5ab24bb7 *man/DTe40.Rd
be0384bf4ebfc42dce6e102f946fde1d *man/DTe50.Rd
9e6688f914bcb65d32b0764b50a3d454 *man/DepF.Rd
b6db2271f846a314b23192615db66a45 *man/DoOpt.Rd
cfcc384154ed006b2bfc64fb40f013fc *man/DynF.Rd
0605448dcecc732e6c8ca43889b6d754 *man/EtargetLopt.Rd
3d37d11e7659b51462bf113a84cc6060 *man/FMSYref.Rd
2c52b234d728743025e25b6e16108322 *man/FMSYref50.Rd
b5f0378c7da3ef5b44b753b6ec9b2d5e *man/FMSYref75.Rd
8dac663b38cd64294e21159cd8b86726 *man/Fadapt.Rd
fa912eddf3224e13367db2f33edcc4cf *man/Fdem.Rd
76dda5524b3ff2a375ac140aaa91d36a *man/Fdem_CC.Rd
262738f01087df4de268a9ccced2d8b8 *man/Fdem_ML.Rd
2af0f9abb53afdfa388bed738a324f81 *man/Fease.Rd
dcacc5dfb453b15ec40c07b3fb76dbf4 *man/Fease_xl.Rd
4a6dcf68a5fd9cbb10885275689494ae *man/Fleet-class.Rd
c1af2e72d8b0790b3625cfc0755f9e85 *man/Fratio.Rd
afc034b73b3e89719fcdb55d61d72cc6 *man/Fratio4010.Rd
e2ffb52c3ce080676c69aec5a0d92049 *man/Fratio_CC.Rd
7e29537bd930c8227557813949a4f049 *man/Fratio_ML.Rd
99239ade0b23e750f820abd6612da052 *man/GB_CC.Rd
71f6b94d42ca8bed41df4bb83c9b7104 *man/GB_slope.Rd
6f212c79cfb267bb46d1bcb0fd912ae0 *man/GB_target.Rd
b65174fb4042826e057c6e16a51af772 *man/Gcontrol.Rd
a60efba2f9c9ed66a34aed9d165aaa8a *man/HDAAC.Rd
ece3a004ad5cd53902bf257ec11c1102 *man/IT10.Rd
ed003626488d61ca062485a27dbeca32 *man/IT5.Rd
d7eb594bc624e23668f19e9b96bce273 *man/ITM.Rd
71c2b1bc917f4110f38f713e39c3aedb *man/ITe10.Rd
55715365ff89789b80b2026cbc4af180 *man/ITe5.Rd
f335e9199dfccab145748793d30efb3d *man/Input.Rd
ec39e27e073362034391b84a65225b14 *man/Islope1.Rd
4643639a2aa219f1b04b474b0f44d774 *man/Islope4.Rd
36bc0995a435788b377dd747767501ad *man/Itarget1.Rd
d5fb0cde4a64dca52e27034e37925e11 *man/Itarget4.Rd
ab836ea040a385cf5f78728a14d2c972 *man/ItargetE1.Rd
0cb7a45ef50c970bf685568a552f84fb *man/ItargetE4.Rd
fcc56a7a4e9fc21e61ef3413e13b4267 *man/Jplot.Rd
e3099c3c95dbd8ecd38a127b36272d2e *man/KalmanFilter.Rd
96b6ed2f6499d490fa8352d61586747d *man/Kplot.Rd
f0147f8f421620b099df745335e05cbf *man/L2A.Rd
4a0a384cf4ecea453951277551516f50 *man/L95target.Rd
adc7ede1fa1c5cd6407bcbebde980ad7 *man/LBSPR.Rd
3fc9cae8ac5e76edf138f27cdc067aaf *man/LBSPRSim.Rd
11b4fc4da183db303abdf76ad3d3ef1e *man/LBSPR_ItEff.Rd
ceb0ac563f7619f2324bb3aa97f92a4d *man/LBSPR_ItSel.Rd
8e1fad52a8dfd5a355b90b93161537c2 *man/LBSPR_ItTAC.Rd
ffe2a04ed4476bc2076c4e98ada3e022 *man/LstepCC1.Rd
2c995f5a8bd95dc6e10b1ed0d8f69a02 *man/LstepCC4.Rd
3abe032a1bfe2670e52a8eca389002a8 *man/LstepCE1.Rd
126523ece335a8de2105005cade5c287 *man/LstepCE2.Rd
e363e1603323dc5cae2cdded0377d825 *man/Ltarget1.Rd
b92e87dfb7368ed7901253b6bd1bb777 *man/Ltarget4.Rd
94c36cde2795920373627e3fb8ae07a8 *man/LtargetE1.Rd
938b3d9d58a3617c6726de00b70fb0e5 *man/LtargetE4.Rd
54f8ef41104c4bd613c82240e14fcc27 *man/MCD.Rd
37040a7fd48d5738755044e9f0d7e9f1 *man/MCD4010.Rd
5a524bb106274ba3a1447a48fa2be4b9 *man/ML2D.Rd
1b1c4a0991378b45cae936ea8c504564 *man/MPStats.Rd
1b4815d165e9491e3fc5002f75ffeb94 *man/MRnoreal.Rd
e2032abc5d3322ab4d677ac13c4e9e80 *man/MRreal.Rd
a8c98c28e12b22ecdef4f5970d69f2c8 *man/MSE-class.Rd
8445d96886c2db1889316e781bdf89e0 *man/NAor0.Rd
ba19fc3fddec23dc8e545bed3dd49780 *man/NFref.Rd
f1fb86d0531a7835d83bc72ba31c5a80 *man/NOAA_plot.Rd
a763e06c7551cca06077c899a954fb4b *man/Needed.Rd
cd7be8b4b04f213bf106b4b7b8ed4d98 *man/OM-class.Rd
46585d45cec0257f0965f48018d13227 *man/OM_xl.Rd
5ed7713edc457a14929ebf69d5d18e62 *man/Observation-class.Rd
92ebf00be2723d34b0aba848678ecb57 *man/OptFun.Rd
819b2af9abc6d785ec3c0c4c2c22ecc7 *man/PorgMSE.Rd
b5e7e923b52c1a2fc7c465b694208277 *man/Pplot.Rd
65b84f26e0473d685733a9aac2aa3504 *man/Rcontrol.Rd
231d80593064beffb936414f8c55d875 *man/Rcontrol2.Rd
d4c6fc466788f3575f17e61e6504e8e0 *man/Required.Rd
79cef4e95dcc1ab66479a3dcc6889a5e *man/SBT1.Rd
50193157f838f1987d2e5346bf7f4c2a *man/SBT2.Rd
48413b67cb2bf8b24c4e2c6a1bf9a124 *man/SPMSY.Rd
3ba44de34bb0b816f5b842a7f588d77e *man/SPSRA.Rd
eaa80736f452e13120d450d1b3d92690 *man/SPSRA_ML.Rd
5b7f29499b7233e95ae5cd3fa9321564 *man/SPmod.Rd
00a02d11a052e1d5f097f1f42ce86940 *man/SPslope.Rd
9fac9aa970a38a144fb432d19b443be4 *man/Sam.Rd
a5ec2285759f4c5b4f6bd513f4a63c92 *man/Sense.Rd
38d3a1022110a4bc472cd8c491fff01f *man/SetRecruitCycle.Rd
862893c69866023a577d66bd83f68dc6 *man/SnapMSE.Rd
ac1d94f9fda942b5ae530981511dc0fb *man/Splot.Rd
076adda8987cdbf760ac8a98be74e1d3 *man/Stock-class.Rd
a7d6e422c7694f362cee8e7aa19d9712 *man/Sub.Rd
06e0f5ee8b3222a22cdcf0fe1610a0e9 *man/TAC.Rd
f5004065f4d4cc5986e307c81ec5a52f *man/Tplot.Rd
f6b01dea61c7c9b5005e25289693a78d *man/Tplot2.Rd
d7e3656b7f650b332dcbca5db9dbf068 *man/TradePlot.Rd
9fd631c682e7f3387ec443960765c8d6 *man/VOI.Rd
e2bd85233dabe7082f51ca8ed2010990 *man/VOI2.Rd
5d30b17a6aad42817c299094bea30681 *man/VOIplot.Rd
e004e56bb5b14e1e51e5137b5c1fb39c *man/VPA.Rd
f2f67cb2a7c859b4fd8113b70ddd32d4 *man/YPR.Rd
d1e42b93c6f957bc6169d386aef08e09 *man/YPR_CC.Rd
c1f2f64dd6d759a1043a0e3e78ab42e6 *man/YPR_ML.Rd
e878a900e1fdba937005c6a496eb9db3 *man/avail.Rd
7cffc6a54897e0d3258b8f86a10b7ee9 *man/barplot.MSE.Rd
9977ce91919993c505bb449073c27b19 *man/boxplot.DLM_data.Rd
7adfdbb7cdaa1570c5ff424afdfb672c *man/boxplot.MSE.Rd
2c59d20ea15b850b1c182b3bf757cb89 *man/comp.Rd
ba509e560771ca4d3465bb732421c328 *man/curE.Rd
c8307755bbe0697929c47abc6aa76a60 *man/curE75.Rd
1618d797109353dba2fd04e71541dbf7 *man/getAFC.Rd
5120c7c5a7583d6c2d6181ac0f7d6265 *man/getmov.Rd
8c4a4da10cfedaf05a3573b367cf7414 *man/getq.Rd
8942785585860d48b15b6325b85e7722 *man/initialize-methods.Rd
23d80314bd6d2a23c685b5305c82f103 *man/joinMSE.Rd
9c69faf478dfa2b664439a069ce83b04 *man/lmmodel-class.Rd
d6ed78d5a0422577526e5032338bf3c6 *man/makePerf.Rd
395d965f6627decaaa88d92dbaecc761 *man/matlenlim.Rd
2ce9667d41d4a64be2d418588d6e2cab *man/matlenlim2.Rd
f9a8452dfa8b473b2100b50353fd0a81 *man/minlenLopt1.Rd
4af0a6346729b3253d823203a279f9c8 *man/movfit.Rd
570b81f58cea89dc7629acfca63c424a *man/ourMSE.Rd
0032b35e5d937e5a13ef53eea89af668 *man/ourReefFish.Rd
8429be12751338b860b9a416cba14b81 *man/plot-methods.Rd
3c9bf4b01e79bcad501dbfb685f6dada *man/plotFun.Rd
e68f39b942ba661f0b3663ace5f5f3b2 *man/plotOFL.Rd
5a28b6566dd1fbe66f3c7c35d9953c82 *man/qopt.Rd
f6b351eedaf6e54dcecad0c49fae332b *man/replic8.Rd
61c707365a936988d12581446b87578d *man/runInMP.Rd
428aea5193cb7662f38fb0108d73c188 *man/runMSE.Rd
aec6bd9069de7861c0ffc8385e46434e *man/runMSErobust.Rd
2de81ba36ba2d87ddbf86114021564d5 *man/slotlim.Rd
98d11d02fda8463a84ff2fa89f86566c *man/summary-methods.Rd
1d7e322454e958a96d19b9d266024cf0 *man/updateMSE.Rd
e5cda06882d9fe11f18240cd6a6fe917 *man/wormplot.Rd
22cc44aa57cdec1e47abf7d23b5411fe *man/writeCSV.Rd
3f47e38a83f176ce1ca03f6f5688d8aa *src/RcppExports.cpp
ac3c2c2eb00647c5992d7673d7972694 *src/bhnoneq_Rcpp.cpp
04f456221721bc313a264373748036c9 *vignettes/DLMtool.Rmd
