a25de744281521326a7c66f1d11b7796 *DESCRIPTION
984ea7d75cb03e2d4800c86bc07b47aa *NAMESPACE
b3170f2c3ca94d1d863b9f5f52f88fb6 *R/00-generics.R
33a16ce7dc7fe041c86c2af048e9f81a *R/01-cloneMaker.R
8651d29f0e0de476f5469d902da72969 *R/02-simulate.R
958179530323b5fec125dde65461ea0c *R/03-utlilities.R
031af709d85b3d2ec759eab39e0eb45f *R/04-algorithm.R
6f2c5f09fb9067c9e5e1f934029731f0 *R/oldNames.R
96eadecc96c844a89ab29428df8b000b *R/sysdata.rda
7b79a5be234d5b2d1c66a2c21d6084f4 *TODO
e1ac91d3eb374519891c2bca32a07ba1 *build/vignette.rds
56228c9a5f679436321e11e6d8ceb811 *inst/auxiliary/README.md
4a15fcf4afa7c063918f36f4eeee8268 *inst/auxiliary/assessing.R
5d77ceac66948c92b8978e67502dd4ba *inst/auxiliary/chlens.txt
0b832a4fc5275f037405de94795aca36 *inst/auxiliary/clinical.R
d5fc7a5959ac55ab59ca250e534da5d0 *inst/auxiliary/cnv_survival.R
7bba4490580f6c9c5a233cdfb277cf19 *inst/auxiliary/figures.R
7a3f675868590297e89c2e5d4b345d90 *inst/auxiliary/makeChlens.R
791bf639196180080f3d8a7dd1344a10 *inst/auxiliary/running.R
cc7f5cc34c6d4e92a5b45a009d07fa29 *inst/auxiliary/simgen.R
5f9113d284ca409bae247995c5115b04 *inst/auxiliary/stash.Rda
f25713fc602c2599c507e8b344e8d918 *inst/doc/CloneSeeker.R
c055ef2b2ed2b58631c9c56cdbcdda00 *inst/doc/CloneSeeker.Rnw
081cf0d1ab8b0b347dd66286b6116563 *inst/doc/CloneSeeker.pdf
b784a00b476617a2567071c8be8f51ae *man/01-simplex.Rd
d34f0520983f75642b0cd3f9d649448c *man/02-WeightVector.Rd
1edaf75405eb7b017658e576b5b90c81 *man/03-Tumor.Rd
6353253575f65048d993c66aa072c49c *man/04-simulate.Rd
9d08edd73a5356288ab36bf8ddf3cf00 *man/05-findClones.Rd
fe3d3e7a35b35b12349bffc39451aa2d *tests/test01-Simplex.R
3cde1e12d4ecf2b581d0908a93517b3e *tests/test01-Simplex.Rout.save
a923c16233d54063efd60e5b84f3d4bb *tests/test02-WV.R
3193b5994985b7787c98d8ea41d9ac60 *tests/test02-WV.Rout.save
fb3a3bddc0f73c1d0a990483ff93d5e7 *tests/test03-simulate.R
e37dee2eb37079e6388c1709b6521cb9 *tests/test03-simulate.Rout.save
80347573e15157b501f3b653828d9484 *tests/test04-algorithm.R
195a10b81efe07c4acf490e6cd83cd7d *tests/test04-algorithm.Rout.save
c055ef2b2ed2b58631c9c56cdbcdda00 *vignettes/CloneSeeker.Rnw
