37b987284e34586fdfff03d0b99ce5fc *DESCRIPTION
2f188de472b827c142895cdf04eab814 *NAMESPACE
051970acee619db12aaf0aee897cb752 *NEWS
b00c9c4364173e9d2aa838f841322f4a *R/addsamptree.R
bb2abb27f663615d59777eb7d6e0a0a3 *R/canopy.BIC.R
a32a2c27034a70d86243c108d080ec81 *R/canopy.output.R
54d9a8bf516ca83406b5ab7bc39b15fc *R/canopy.plottree.R
e64eef2c4458e8319c5275e8a06403f8 *R/canopy.post.R
62746d69a8d0642a7919a2b82526cba8 *R/canopy.sample.R
74c0367799cb59ce005b372a66580e13 *R/getCMCm.R
2380f30a9489972a937698c106b1fa0f *R/getCZ.R
56d9bc50106cebc0613f01399c3cca59 *R/getQ.R
3b1207261f58f33743ee379b209d3721 *R/getVAF.R
35fd6c0533f1d3055a30e80c8f3e00f0 *R/getZ.R
b2a20b818ac2408d25d86b8ac166864d *R/getclonalcomposition.R
cdc34f5d6505f54c0442f02bc9ea38d7 *R/getlikelihood.R
ae8b702052714a42a0de99be5e31c0a8 *R/initialP.R
af944877c18e0498ae37c1fd6095d502 *R/initialcna.R
c1a7379c9c22ca3272714b8b44011466 *R/initialcnacopy.R
b1881ad5b65a2cbdee6333cc3d52ff01 *R/initialsna.R
ca3cbb81b78160bde5d221cb9d7f08b6 *R/plotpostlikelihood.R
7384f89e244f93e71400d9750300eeac *R/sampP.R
9d2e33d3b7345a30e510ffd42c4185f7 *R/sampcna.R
5ec3c8edfc499792f6e523ca3b079dd0 *R/sampcnacopy.R
58f4982dd5a535d6393cfdc9712dfc9c *R/sampsna.R
9b67ecf1ecc9d433f8d46fcaba7bef15 *R/sortcna.R
09c0d936649d30accd4e7c3bf4475c8b *build/vignette.rds
bf753202fb82086a89ee9d8369376c77 *data/MDA231.rda
294ec9ce4d226571485568418af88d4c *data/MDA231_sampchain.rda
7ad37011385689d6f835c4a8d73c37b7 *data/MDA231_tree.rda
7f2a7caa296df9f507f36f49e7d98fde *data/toy.rda
32011f2c552032e2bad4ccc7ed285a65 *data/toy2.rda
1e60e00b45228b5fc2910b91dbc9a490 *inst/doc/Canopy_vignettes.R
a0ae7116d4ac1d8cbdcd90f237b874ca *inst/doc/Canopy_vignettes.Rnw
804e1f60b4d942768344736ca8f45840 *inst/doc/Canopy_vignettes.pdf
bcae3c69193fb72312ceeca75a94e56a *man/MDA231.Rd
344907524121b33c48598b7e3ac82682 *man/MDA231_sampchain.Rd
9fce3b86151455f2cf1e59e995665e8b *man/MDA231_tree.Rd
9b33b688e8a18615b1cb1d96dfbe8300 *man/addsamptree.Rd
8632291fbb1f15908d1db0a9f5dbccbf *man/canopy.BIC.Rd
be486c670495f8e53974c4e60f434b13 *man/canopy.output.Rd
5a7c2e95c9c6ca199466e058fe9ed797 *man/canopy.plottree.Rd
78bb0e12a47ffc358a1ac004dfd62173 *man/canopy.post.Rd
ec6fae101b19a717590348f527ccb2ef *man/canopy.sample.Rd
1d08f5673438656b25b6cf8d714a578d *man/getCMCm.Rd
06ad2e93d723257e574e21714bf69b4a *man/getCZ.Rd
e961d4f1ba09ddb4cd41fba26db10e2e *man/getQ.Rd
4a85e28f167d15b10166ca5a06165795 *man/getVAF.Rd
14de406e1f81cdbd0bb413b4d2f63e73 *man/getZ.Rd
d467f1e19f6a914bbcd141855e9e975e *man/getclonalcomposition.Rd
7864643685c93d3df73f28ca6ad6cc17 *man/getlikelihood.Rd
46dfefc9d7dc986725da379dd6543a44 *man/initialP.Rd
1eb491cc94557f38df0cd973fae0b2a4 *man/initialcna.Rd
57552e143beade3a07787fcacf73bbb8 *man/initialcnacopy.Rd
3664ed7b6cd660e9de9092837feb95b2 *man/initialsna.Rd
b40f95c3d22b194c9ac0621faaacaa4f *man/plotpostlikelihood.Rd
9fa9d6521721202792110cef861ac2f7 *man/sampP.Rd
6d6eddca02f677c662587dc367afaf66 *man/sampcna.Rd
54cf1f857968ad8e3c3afa97ec110e27 *man/sampcnacopy.Rd
e105b76053d7e0ebba6584c0e24c1209 *man/sampsna.Rd
ef3cbc678b6cd89f858faa306bbc16df *man/sortcna.Rd
438df88fabda4fb3b00347268ec543ec *man/toy.Rd
abe1f762ab3a9364f690e24153240a43 *man/toy2.Rd
a0ae7116d4ac1d8cbdcd90f237b874ca *vignettes/Canopy_vignettes.Rnw
