d8f9a5f5dea3490d81cb1fd31bd5d311 *DESCRIPTION
929d570da56070a76856338cd030508c *NAMESPACE
8ffa5922a932ef2c6afcf3eeaa91c545 *NEWS
b00c9c4364173e9d2aa838f841322f4a *R/addsamptree.R
40c3324f9d86f201a383e26d0ac01210 *R/canopy.BIC.R
a32a2c27034a70d86243c108d080ec81 *R/canopy.output.R
698ddfe39e0dde2131ada91d237c2edc *R/canopy.plottree.R
484975afebe59b0444ed961d51087be8 *R/canopy.post.R
9c4337ecc4a87e96a7eeab1feb5c99ba *R/canopy.sample.R
74c0367799cb59ce005b372a66580e13 *R/getCMCm.R
2380f30a9489972a937698c106b1fa0f *R/getCZ.R
56d9bc50106cebc0613f01399c3cca59 *R/getQ.R
3b1207261f58f33743ee379b209d3721 *R/getVAF.R
35fd6c0533f1d3055a30e80c8f3e00f0 *R/getZ.R
b2a20b818ac2408d25d86b8ac166864d *R/getclonalcomposition.R
cdc34f5d6505f54c0442f02bc9ea38d7 *R/getlikelihood.R
ae8b702052714a42a0de99be5e31c0a8 *R/initialP.R
af944877c18e0498ae37c1fd6095d502 *R/initialcna.R
c1a7379c9c22ca3272714b8b44011466 *R/initialcnacopy.R
b1881ad5b65a2cbdee6333cc3d52ff01 *R/initialsna.R
ca3cbb81b78160bde5d221cb9d7f08b6 *R/plotpostlikelihood.R
7384f89e244f93e71400d9750300eeac *R/sampP.R
9d2e33d3b7345a30e510ffd42c4185f7 *R/sampcna.R
5ec3c8edfc499792f6e523ca3b079dd0 *R/sampcnacopy.R
58f4982dd5a535d6393cfdc9712dfc9c *R/sampsna.R
9b67ecf1ecc9d433f8d46fcaba7bef15 *R/sortcna.R
b5f2a2651028bf7c0bd7d8f4ccee8429 *build/vignette.rds
bf753202fb82086a89ee9d8369376c77 *data/MDA231.rda
294ec9ce4d226571485568418af88d4c *data/MDA231_sampchain.rda
7ad37011385689d6f835c4a8d73c37b7 *data/MDA231_tree.rda
7f2a7caa296df9f507f36f49e7d98fde *data/toy.rda
5dc5b5d5cd84f811683b594fa9f37e16 *inst/doc/Canopy_vignettes.R
892eef6d7a8a7b0a64bfdabb96633b59 *inst/doc/Canopy_vignettes.Rnw
4649683795b24836098242efcfe656b7 *inst/doc/Canopy_vignettes.pdf
bcae3c69193fb72312ceeca75a94e56a *man/MDA231.Rd
bbf69f010a46a86c878f669bc8cbe1e5 *man/MDA231_sampchain.Rd
9fce3b86151455f2cf1e59e995665e8b *man/MDA231_tree.Rd
9b33b688e8a18615b1cb1d96dfbe8300 *man/addsamptree.Rd
8632291fbb1f15908d1db0a9f5dbccbf *man/canopy.BIC.Rd
be486c670495f8e53974c4e60f434b13 *man/canopy.output.Rd
9613f9520ad8da76011274c0e5214d26 *man/canopy.plottree.Rd
78bb0e12a47ffc358a1ac004dfd62173 *man/canopy.post.Rd
ec6fae101b19a717590348f527ccb2ef *man/canopy.sample.Rd
1d08f5673438656b25b6cf8d714a578d *man/getCMCm.Rd
06ad2e93d723257e574e21714bf69b4a *man/getCZ.Rd
e961d4f1ba09ddb4cd41fba26db10e2e *man/getQ.Rd
4a85e28f167d15b10166ca5a06165795 *man/getVAF.Rd
14de406e1f81cdbd0bb413b4d2f63e73 *man/getZ.Rd
d467f1e19f6a914bbcd141855e9e975e *man/getclonalcomposition.Rd
7864643685c93d3df73f28ca6ad6cc17 *man/getlikelihood.Rd
46dfefc9d7dc986725da379dd6543a44 *man/initialP.Rd
1eb491cc94557f38df0cd973fae0b2a4 *man/initialcna.Rd
57552e143beade3a07787fcacf73bbb8 *man/initialcnacopy.Rd
3664ed7b6cd660e9de9092837feb95b2 *man/initialsna.Rd
b40f95c3d22b194c9ac0621faaacaa4f *man/plotpostlikelihood.Rd
9fa9d6521721202792110cef861ac2f7 *man/sampP.Rd
6d6eddca02f677c662587dc367afaf66 *man/sampcna.Rd
54cf1f857968ad8e3c3afa97ec110e27 *man/sampcnacopy.Rd
e105b76053d7e0ebba6584c0e24c1209 *man/sampsna.Rd
ef3cbc678b6cd89f858faa306bbc16df *man/sortcna.Rd
438df88fabda4fb3b00347268ec543ec *man/toy.Rd
892eef6d7a8a7b0a64bfdabb96633b59 *vignettes/Canopy_vignettes.Rnw
