bb9326d9f5beb4330d24e84552579f85 *DESCRIPTION
77c52c8f9af20808609277e4211c0a5b *NAMESPACE
9fa9ddcaf1680a55fd1f7ea2577a2e90 *NEWS.md
210bce7f927d302c7b0fe0db91f3c908 *R/000.R
dcb0e44d79e9859ee6006eb8c70b2837 *R/999.NonDocumentedObjects.R
c23d316ca53bd0301de5258b4aaa5310 *R/999.package.R
811956c24016602ba620567927d4f7df *R/NmfPlm.R
6f2c95dbd8ee7a0cd7ad569d848e4e49 *R/NmfSnpPlm.R
3be7378adb85e032dc156f45783a107f *R/SnpNmfFit.plot.R
83b494bb6b1c90ce50bcc46e8819a8b9 *R/WHInit.R
0c4dcdb0fa7b84559b3d9d55e1c72ac3 *R/doACNE.R
43ec0793bbd1bc290d0d0771581b2e36 *R/fitSnpNmf.R
efadd9cb8aada55e4c64afa764214643 *R/fitSnpNmfArray.R
19b85a3b5b5e27ba5baeab3f4ca0bddb *R/miqr.solve.R
75362d579480e01adc0d15165b1841aa *R/plotFreqB.R
cf6f9f7bb65e386403c443fb8dd82fe8 *R/pseudoinverse.R
b4de84fc276d048db4a93e7151934f2b *R/removeOutliers.R
79275506297d9cf7c67dd4403b1adaed *R/robustHInit.R
a6c17106faa1f34239b9bcc5c845294b *R/robustWInit.R
42ff7cf6113ebc121d2afa5d2d339f84 *R/snpArrayToMatrix.R
37e02caff1501ca7ffb6e309036a4aaa *R/zzz.R
13d465b6f00323f1903cdabab19467e9 *README.md
55f9a63320eb819a310c3064e8320bf6 *inst/CITATION
845fc2d26b08291eaa04c5320e9ebad5 *inst/extData/V1.Rbin
ac2e2b22c156082e3c57f8f7dda8e0de *inst/extData/V2.Rbin
a0dd946442f3343c01c72e95f1cb2f5e *inst/extData/V3.Rbin
d7dbe472ddb8844f22347774098ddc77 *inst/extData/V4.Rbin
f79989bac3afdb33ad4426c56331f5d8 *inst/extData/V5.Rbin
77cce37e198c2612f7ac36a7f1c4c777 *inst/extData/V6.Rbin
88e3604ce5c27983b17b19baaa05d8d5 *inst/testScripts/system/chipTypes/Mapping10K_Xba142/test20090128,10K,NMF.R
2d42ef38b5beabdac25d02c40d4134aa *inst/testScripts/system/chipTypes/Mapping10K_Xba142/test20100517,10K,doACNE.R
72b08eff03c98afea31c01fa70f4dc3e *inst/testScripts/system/chipTypes/Mapping250K_Nsp,Sty/test20090128,250K,TumorNormal,NMF.R
03466cd46dbaadb6ee92b662ada0f7ff *inst/testScripts/system/chipTypes/Mapping250K_Nsp,Sty/test20100517,250K,doACNE.R
74c07aa9483ae90f2c33a9e721900260 *inst/testScripts/system/chipTypes/Mapping50K_Hind240,Xba240/test20090122,50K,NMF,freqB.R
3d422bf74c9f00131dc956b1fc4126b7 *inst/testScripts/system/chipTypes/Mapping50K_Hind240,Xba240/test20090128,50K,NMF.R
5ac03079e51d67fe703afd215c4a1e43 *inst/testScripts/system/chipTypes/Mapping50K_Hind240,Xba240/test20100517,50K,doACNE.R
8f9700fa7be52c98a655e73f0adba7a4 *man/ACNE-package.Rd
7bb3429325e13b3348383b53dc917bf5 *man/NmfPlm.Rd
6540822e523bf41d4562d2fdf4a25ddd *man/NmfSnpPlm.Rd
aa51dd9bb25cc3a4acaa7d88024e4fbb *man/Non-documented_objects.Rd
5dc421f3c8a7c2a5cf52355da6f445e8 *man/WHInit.Rd
1a43c14c388ecb02ddebc14ec9eb3738 *man/doACNE.Rd
37868e70fe703212acc700ffd4e0f753 *man/fitSnpNmf.Rd
270d0d2652a5c6147ce7ae79d93547a1 *man/fitSnpNmfArray.Rd
97dba4132c2a6c12d0c1943f6a9b0fb2 *man/plot.SnpNmfFit.Rd
2cbbdffc0687ff8217fb21dda2d63cf8 *man/pseudoinverse.Rd
29f7de9f161c4da9c10527b3677b4b23 *man/removeOutliers.Rd
8ecf4559c93087e132f9e1d500e3bc42 *man/robustHInit.Rd
aaf2dc1f1ac345ce8413b05054add7d6 *man/robustWInit.Rd
84b19cf3be1ca8bf47be63df2339300d *man/snpArrayToMatrix.Rd
bc0524d0485fefbd8cc5ff7db3eac0c6 *tests/fitSnpNmfArray.R
