86762112bf74beb8e8cdf20c4ec24dee *DESCRIPTION
ca3ebda9922491131e9830463cb75167 *NAMESPACE
5c270f64688e888b05a4431dc633997b *NEWS.md
6039cfcc67e3515a7470659bef837c8a *R/RcppExports.R
07fbeba985030b17abe187ee785fe182 *R/calc_commonness_error.R
82dadbbc34ed304079224115b188e405 *R/catch-routine-registration.R
ef4239a82f11f2bb35a86a4472356cf6 *R/data.R
9659d57e4298c48c420acfd89831deb7 *R/generate_commonness_matrix_from_gdm.R
8a86e218e75b6ce473c9c0f395746987 *R/onUnload.R
e549882fe5994f61406700f97e0505fc *R/plot_commonness.R
5a7051a0856a0282c89b8fbfbdb0538d *R/plot_error.R
e97dff4373e802fc20314d41114690df *R/run_optimization_min_conf.R
9efb08c312c86fc36bae994c145b0d6d *R/spectre-package.R
5ae4aab3376ae96c8eac270b4fb58576 *README.md
b47f607b1f7ae55e1a59f492518a9b6d *build/vignette.rds
9a50df56352f447424f03e66addcef7a *data/alpha_list.rda
a5cda9267a2ea78bebe5336fa51ead1d *data/estimated_gamma.rda
b8d3b85a944ebf51356daeee6a958ba0 *data/target_matrix.rda
86725b3c45413959a485e9ace55429d7 *inst/doc/getting_started_with_spectre.R
48392114979abc2a305c478239e8e0cb *inst/doc/getting_started_with_spectre.Rmd
2815623921016bc8f45609b619e5a981 *inst/doc/getting_started_with_spectre.html
c717b1d6fa6a38cec594208f4f0484c2 *inst/doc/minimal_example.R
4603351fc717c2bcb9528542590089de *inst/doc/minimal_example.Rmd
f90b180f359fcbdf06b1a2888d9a37f3 *inst/doc/minimal_example.html
e332eab509b97d9577db3f8246118a96 *man/alpha_list.Rd
7c81c9e5acf82d78a055e501533734bf *man/calc_commonness_error.Rd
845dc46fe0844070912a9542a92cd79e *man/estimated_gamma.Rd
93814868954dcea1e1dfed25565e3f4b *man/figures/logo.png
144b4adc73610d7faa2011b5925cb267 *man/figures/spectre.png
01501dff74e0eb3027a0486772d81c30 *man/generate_commonness_matrix_from_gdm.Rd
dae6d3fa41f4c9f458246355f3b2546d *man/plot_commonness.Rd
2ee6d8a210b84bfd95f23549b45a7345 *man/plot_error.Rd
5667f928856f8d4285e223f61bed24aa *man/run_optimization_min_conf.Rd
2f4127b0dda26e02f3c2c57acc9c04bb *man/spectre.Rd
f5c6d751d2392b95ebc3e654aa882ab5 *man/target_matrix.Rd
6cf6631e46082663f4b35ba09847106a *src/RcppExports.cpp
31bc33ed3e60822a832905d37881289d *src/minconf.cpp
1da81f7fe151868829266a69f62336b2 *src/minconf.h
1ff1f2998a8d0a9bad68a07368d3bebb *src/optimizer.cpp
bc87668b883ce9b1579f60b83e74b1f1 *src/optimizer.h
255c99c6be6a0b887a3fa03df19b6c87 *src/test-minconf.cpp
09832c98ab5b0c9827c17bc3215e96ba *src/test-minconf.h
c2cb0c30e10da611f9fbe56aea52f7a9 *src/test-runner.cpp
d369203dcb5c00858863664393856d64 *tests/benchmark/benchmark-minconf.cpp
b52f078bba008d1274073e07fed4535b *tests/benchmark/catch.hpp
60dc0b93848c840b096820b49926441f *tests/testthat.R
59099728f05504a4a6d6fa9b5e0168f1 *tests/testthat/test-calc_commonness_error.R
7efab916634482ca3a69d873b8898f4f *tests/testthat/test-cpp.R
f0bf975fbb8b25f58376270af0941952 *tests/testthat/test-fixed_species.R
5f3d23ce849d52981bbc26deea3fe1b6 *tests/testthat/test-min_conf_errors.R
75d3e718a01f67ab664d77298bd8c2a2 *tests/testthat/test-plot_commonness.R
23acc3215870ec0451a742dfecdedf51 *tests/testthat/test-plot_error.R
8b85f0bf2434636203a28a7493bfb6f0 *tests/testthat/test-run_optimization_min_conf.R
943137c0a033130b17960beb7ff53124 *tests/testthat/test-test-generate_commonness_matrix_from_gdm.R
0dcd7acbd49a564040616fa0057cb6c0 *vignettes/bibliography.bib
48392114979abc2a305c478239e8e0cb *vignettes/getting_started_with_spectre.Rmd
4603351fc717c2bcb9528542590089de *vignettes/minimal_example.Rmd
