5f02e482fde142859d060bd185af694a *DESCRIPTION
8a19e722d7ad475bf4cc29e0631bc48c *NAMESPACE
c50744b11514cc56fcc9ec1325d74141 *NEWS
765155f213b3a6713c3b60d8984c71b9 *R/RcppExports.R
be7f307615d27ffc27c81d0c3686eb0c *R/allopolyploidy.R
b232020aaa1edffbcd2973fab78ff52f *R/class_conversion.R
1b4b60618d1d822bbed8af3f0c52f305 *R/classes_generics_methods.R
6a4a2f92c6565817635329e97525d883 *R/dataexport.R
8105b488394384ed7b513c4e15eed980 *R/dataimport.R
9ec369a39d57fe5aa08a67f5489555fb *R/individual_distance.R
48f0f24c9de4e1fdb29bf551fb7f538b *R/population_stats.R
31c9c3ad5b102daa6702fc03871dc163 *build/partial.rdb
bc5c656dd540f5252af188730255fa08 *build/vignette.rds
cbf20eeb5b2890ae164bddb36117ce98 *data/AllopolyTutorialData.RData
a67a0fc43ff6138f1f94095d90220e11 *data/FCRinfo.txt.gz
7a6576a7d8b2a45d910364ae577a06f5 *data/simgen.RData
6ef62896a40727b96ce458ef59ec7291 *data/testgenotypes.RData
1491639c7f19a673aea96853317bedee *inst/CITATION
0461a89ce7349a6debf640a7b9781d3c *inst/doc/allopolyVignette.R
adb9e9a0b96606bb86b6a2445f0e1045 *inst/doc/allopolyVignette.Rnw
06f3a86985f9e5005f88a4408963f67b *inst/doc/allopolyVignette.pdf
461478e9176ae4845136a8911911585e *inst/doc/polysattutorial.R
393414ea0914cfb060a1737121dd7bcb *inst/doc/polysattutorial.Rnw
3b5e21c082ae6924839a09bf401dd2c5 *inst/doc/polysattutorial.pdf
18c40b47f6a29ece81fa7a8a4ffac7bb *inst/extdata/ATetraExample.txt
8e7ba05d0f492562b2899a67c51c7873 *inst/extdata/GeneMapperCBA15.txt
3fe87cba334012a41cb3c8e17f8837cf *inst/extdata/GeneMapperCBA23.txt
7916c1760e9497b88b2c56ffb14498c5 *inst/extdata/GeneMapperCBA28.txt
f90df7a32bb6a4cc6b14532981062a9c *inst/extdata/GeneMapperExample.txt
54b318201bec6bc13977327afc2ef7d8 *inst/extdata/POPDISTexample1.txt
64acf09dbdc9a1b2117ca520411d3436 *inst/extdata/POPDISTexample2.txt
4477205c5b8fa749b004d55eacbc1ad1 *inst/extdata/STRandExample.txt
836fe31e0495757ac53d5ca0ab1c9ffd *inst/extdata/dominantExample.txt
cd67d0799a2602ae881346ecf810edc6 *inst/extdata/genodiveExample.txt
572709db60253ba833413d7d3f6ad89e *inst/extdata/simgen.R
fb2bcc052af713ad70fe2da9291c852e *inst/extdata/spagediExample.txt
a3197bc6df63628d0c04c6538a84932c *inst/extdata/structureExample.txt
c129f1a74aeee364c6b0a94ce37e4ef2 *inst/extdata/tetrasatExample.txt
6d27c0ae05235c17f00e3854c8f68697 *man/AllopolyTutorialData.Rd
beca955f2798b4b3acce59a3fb264426 *man/Bruvo.distance.Rd
3c891a027850a5a7838f40b0a26e0fe7 *man/Bruvo2.distance.Rd
657f6d62b3e814573aec540e5ad4a38b *man/FCRinfo.Rd
4d9adbcd18503bfead5bb13929d3851d *man/Lynch.distance.Rd
acb8557095d7c118155d07785969f55c *man/PIC.Rd
001d22e87c02e750378479fb7ce63be8 *man/Samples.Rd
8a4fb6eedd3f63fc14b2d3c2c8f2b0d6 *man/alleleCorrelations.Rd
8847b945ee9dca812e85aeb16d85cec9 *man/alleleDiversity.Rd
ac186471cb2729c30bb3204f73f0ab81 *man/assignClones.Rd
3d492e899c7927f12692470511d03bc4 *man/calcFst.Rd
fbff73af820d226fe2266e9a8fd8cd80 *man/catalanAlleles.Rd
4dcdd2768510162ab2171cb12ea20760 *man/deSilvaFreq.Rd
bed75e5ee16b2cc4ec6a57bed288f6db *man/deleteSamples.Rd
aacf4ae3b41b7b3d6c05e4411ea9ae2f *man/editGenotypes.Rd
c97e3d27bded104cb0adb6432f1513c9 *man/estimatePloidy.Rd
95ff7a5d226a04c29f660faeb6b4ed85 *man/find.missing.gen.Rd
ca759a4577f3b98178d7fa9abeb89898 *man/freq.to.genpop.Rd
bb0d5cf8c88076067ab65e3cb43c04a7 *man/genIndex.Rd
8d02bd7febf89e0906313f7d47f131fd *man/genambig-class.Rd
e5f9e415ebe8682b9fea49df7768291e *man/genambig.to.genbinary.Rd
3d8916cc343470699e8ccc919be86d9a *man/genbinary-class.Rd
56acb4a4c41d836cdf3d0cdee8e941e0 *man/gendata-class.Rd
ca03ca3c13e31c30e7809d4f9334f534 *man/gendata.to.genind.Rd
4c0c01116d9d88fbabdbbea8f6602d49 *man/genotypeDiversity.Rd
10b528e7bfdeeb95512069208da6ebdc *man/genotypeProbs.Rd
1c6a258110f8af713dec4396586a26cf *man/isMissing.Rd
099f1519d34a79e17ad2b439797b05c5 *man/meandist.from.array.Rd
a93e4e157b64f1ab8789bd34363ac2bf *man/meandistance.matrix.Rd
d924db0e85bb80e6ebd682d242549a06 *man/merge-methods.Rd
722992beb57a134698af4f1c7e266fed *man/mergeAlleleAssignments.Rd
4b7bad79c93d33c2d73fcee608c397a3 *man/pld.Rd
a5a6cba12d371328aaaab73e8dac3bc8 *man/ploidysuper-class.Rd
b295e3dfc49e607d7adbaec6bed26966 *man/plotSSAllo.Rd
667fd7c49aafa001e0a450d95b052889 *man/polysat-internal.Rd
28f25933dba29cbd808bd299dda84735 *man/read.ATetra.Rd
715d1b8cd4c92c5ff375f98b3e11ea91 *man/read.GeneMapper.Rd
277222898fdfb562da17794b3596d004 *man/read.GenoDive.Rd
62d0c6cad6e37ea3114bccfac6a35392 *man/read.POPDIST.Rd
c401a59fe6d117c7193b2b498cfe9ca9 *man/read.SPAGeDi.Rd
9cbb6112829dbc59ccbe530b619eae35 *man/read.STRand.Rd
26de8847c6f9fa5d87fff4580fc3eae3 *man/read.Structure.Rd
18eb857d56e0e25aa6564090e21103d9 *man/read.Tetrasat.Rd
7729c419f2caf2db9d26814210cfcac1 *man/recodeAllopoly.Rd
fa5857690a947309b3e060c86bfcd279 *man/reformatPloidies.Rd
80d3209afaf2af6f8f5b292d176472aa *man/simAllopoly.Rd
cf9e9d5899f749cce29abd4e6af7ffb2 *man/simgen.Rd
a5afac596d35246b352dd492df12e659 *man/simpleFreq.Rd
0c15eac4283d38c132cdaa4b864aa4ce *man/testgenotypes.Rd
74639f4761bfe3c7d9a0fcda56d8252a *man/viewGenotypes.Rd
4639947090cfc321955df304fd463c8f *man/write.ATetra.Rd
bfb4bd15ffc0f8e2d637ee51af8b9056 *man/write.GeneMapper.Rd
fb16d1908c0736f6c86a31f4c78aefb0 *man/write.GenoDive.Rd
fef0d2de22433c0140f9325a47919c8f *man/write.POPDIST.Rd
5fca4cea2f9d6436b0f8bc547a432c1b *man/write.SPAGeDi.Rd
e3fafd94bda9a5f3b83e1e3bbf3f6fa4 *man/write.Structure.Rd
20fda0fd2635c53fe1f128758a5696c4 *man/write.Tetrasat.Rd
d3f9a263ae71997fe5f14a774363f569 *man/write.freq.SPAGeDi.Rd
4b9866d1b06470ca51903e6b462df4e9 *src/RcppExports.cpp
6f7de0de310c79d8c88d21f28744ec26 *src/deSilvaFuncs.cpp
18c40b47f6a29ece81fa7a8a4ffac7bb *vignettes/ATetraExample.txt
8e7ba05d0f492562b2899a67c51c7873 *vignettes/GeneMapperCBA15.txt
3fe87cba334012a41cb3c8e17f8837cf *vignettes/GeneMapperCBA23.txt
7916c1760e9497b88b2c56ffb14498c5 *vignettes/GeneMapperCBA28.txt
f90df7a32bb6a4cc6b14532981062a9c *vignettes/GeneMapperExample.txt
54b318201bec6bc13977327afc2ef7d8 *vignettes/POPDISTexample1.txt
64acf09dbdc9a1b2117ca520411d3436 *vignettes/POPDISTexample2.txt
4477205c5b8fa749b004d55eacbc1ad1 *vignettes/STRandExample.txt
adb9e9a0b96606bb86b6a2445f0e1045 *vignettes/allopolyVignette.Rnw
836fe31e0495757ac53d5ca0ab1c9ffd *vignettes/dominantExample.txt
cd67d0799a2602ae881346ecf810edc6 *vignettes/genodiveExample.txt
393414ea0914cfb060a1737121dd7bcb *vignettes/polysattutorial.Rnw
fb2bcc052af713ad70fe2da9291c852e *vignettes/spagediExample.txt
a3197bc6df63628d0c04c6538a84932c *vignettes/structureExample.txt
c129f1a74aeee364c6b0a94ce37e4ef2 *vignettes/tetrasatExample.txt
e450cfed7b359071887d8532aa466ef5 *vignettes/vignettebuild/AllopolyTutorialAssign.RData
6db09f235635eda3dc917fad877e5187 *vignettes/vignettebuild/AllopolyTutorialDist.RData
c35a6e9034a9e1eb5df67b656f242d68 *vignettes/vignettebuild/simfreq.txt
41445b0af4b0f7fe635b7c54128f400d *vignettes/vignettebuild/simgenPloidies2.txt
231dab56b1a368704da98387a7593687 *vignettes/vignettebuild/testmat.RData
1148b3619c946ae9337da951b8489469 *vignettes/vignettebuild/testmat2.RData
81f91c416b144a4d417554b829cccea9 *vignettes/vignettebuild/testmat4.RData
41ade431613bdc350e9dd9d40bc7cd44 *vignettes/vignettebuild/testmat5.RData
