6787c39a8ba6069e18a0e36fc9c7f8a5 *DESCRIPTION
8ac27a707192463a036d87955d4d9c1f *NAMESPACE
39d9cfa7713a702e47dda3e9d52df770 *R/RcppExports.R
e618a23f96fae4d9cd906b24be7d42cc *R/accessory_functions.R
3423c0a85e15e3ebcaa67f6ce24fae69 *R/polyqtlR-package.R
c69f4be59967064e8da2ec31180ec661 *R/polyqtlR_functions.R
e1edd5b5cf7d9f9d55b2c1b1dad4d6cb *R/roxygen_datasets.R
44de50d1e9703229de38471bf2c6d705 *R/sysdata.rda
2836b2c5db38c9819380bd093383d89d *build/partial.rdb
273ae8786214af9df5a9e48fc1352ff0 *build/vignette.rds
aaebbfb12c4d92aedff03e4565d1d944 *data/BLUEs.pheno.rda
f333a9063ce690d28b862cd2910401ef *data/GIC_4x.rda
135203188becdcf4545d3a9aa4cabfa6 *data/IBD_4x.rda
66ab3b4e87140569e78ffc9e79f4715a *data/Phenotypes_4x.rda
d59cc1e74a229189c0fbec74d519797d *data/Rec_Data_4x.rda
5b7ace00d4ef59c66a95f4e0f8130aad *data/SNP_dosages.4x.rda
592b76233b83137e6aa774e11c717bf2 *data/mr.ls.rda
9094fb3060a916b5fbb32dbea622f437 *data/phased_maplist.4x.rda
7a7d794cfae279183cda6c3fcc7f0931 *data/qtl_LODs.4x.rda
a84bcfe81f18788a89bce3796834b0df *data/segList_2x.rda
2d3e605652c71a4c9c0c3584a809561c *data/segList_3x.rda
9047c53c471bae7198adeb3e6f36ec2a *data/segList_3x_24.rda
97d214fbf78eb984c594c52a759a94ce *data/segList_4x.rda
38d45136574b3bbda0cc268ca0fb812c *data/segList_6x.rda
c401472a67dbd216f8065e11725c1828 *inst/CITATION
31eb4de935cd1de4145e9ab2e6d9bf53 *inst/doc/polyqtlR_vignette.R
e3a7826c9f38846db78aa7eb23aa28f5 *inst/doc/polyqtlR_vignette.html
f5a88c48a4fa6c608659613144677031 *inst/doc/polyqtlR_vignette.rmd
ce2894923fdc4c1770c8426db98405b1 *man/BLUE.Rd
97ed92cbd091c317dca95bcf6aeb6207 *man/BLUEs.pheno.Rd
7c10fa329b95348c4453035becd5084c *man/GIC_4x.Rd
769d2764efa4bfc4465ebc30d71a70f8 *man/IBD_4x.Rd
81e6b5e0caff2abd7d7f780f0bb411bc *man/PVE.Rd
d923bf064889ed767e9a3b93682ad67e *man/Phenotypes_4x.Rd
333a05ab362bbb4fa2f4ca3e31a080ea *man/QTLscan.Rd
cd803112242a4068e5f6aa0a2aca6cd4 *man/Rec_Data_4x.Rd
0f644565210bc713e21a579a10ef7ec8 *man/SNP_dosages.4x.Rd
c1af5574ae725e876991720ce5892f7a *man/check_cofactors.Rd
f9b31b115fb62f40b885076778bbf11f *man/convert_mappoly_to_phased.maplist.Rd
0b084b655ffeb79c11280e225d5a67e0 *man/count_recombinations.Rd
560a46014937b23d80e4f3386a009e6f *man/estimate_GIC.Rd
7a9a860fb85fd84797ee2ade24bf0550 *man/estimate_IBD.Rd
17c4c93649e84d5ffed3aee7b15c61f5 *man/exploreQTL.Rd
fe27ef674573f1d23c723b56a91c3dd7 *man/findPeak.Rd
b5bf8d7c3085a11ae04e2b8c00bae76f *man/findSupport.Rd
3fee2f51ab6c60d86234dd5bea7ef4fd *man/import_IBD.Rd
ea96af82320ee52862a3634255cc225c *man/impute_dosages.Rd
c26ebe99b6e55126cf68ca9481d28333 *man/maxL_IBD.Rd
551248d56deb8ae46d8ade23274d5cca *man/meiosis_report.Rd
4eb579304fe6b6a9f3a7437d7d39dca1 *man/mr.ls.Rd
c9a8d57923f7d28b0a6d01579587f7f8 *man/phased_maplist.4x.Rd
fa11ae2ce4cd2cea5e12861be34a6018 *man/plotQTL.Rd
53aa8b171b29c44347f948c4e1865416 *man/plotRecLS.Rd
804ea979bab92bd28cd252afae198930 *man/polyqtlR-package.Rd
606ed8e464c7f1a619699e82dc270535 *man/qtl_LODs.4x.Rd
596de1c41e00a9b6f660d36f2a3be625 *man/segList_2x.Rd
111a7da11530967609419c482bbddb81 *man/segList_3x.Rd
a7ab894130688384c96c28e776c904ee *man/segList_3x_24.Rd
833866e9bfd17af88e256b1d165d8210 *man/segList_4x.Rd
c9c28f78a21374ca9c67ca2c0f81ff2f *man/segList_6x.Rd
82850b422086c934d3c63cc27a21c6fa *man/segMaker.Rd
154f25fb5e2179ee1fbc0a8835c6ba4e *man/singleMarkerRegression.Rd
2cb0b821df44d3016e8313147be1054a *man/spline_IBD.Rd
7a158b1e6d7caa0936fb6e9db9a74370 *man/thinmap.Rd
8c526586fd43bd2e7b30d2dc0a78e3bf *man/visualiseGIC.Rd
784a55aa3eb35e189f77047b652c5b51 *man/visualiseHaplo.Rd
20184d1f126803eef312d47aafb8f25a *man/visualisePairing.Rd
aeca24d8213f6345e8619ed1d115a4cb *man/visualiseQTLeffects.Rd
e0fed6d91aeab5fb1e8ce4c3bd2328a2 *src/Makevars.win
a523e0fd996da12a1784110eaa7c0a25 *src/RcppExports.cpp
eeec9a2475064178dbe9f791320b3b74 *src/forwardbackward.cpp
90d8e6a03693d8a11988271cd217bc6f *vignettes/IBD_4x_DR.RDS
dd1457b0770006cd220af72334f58c9f *vignettes/QTLmodel.RDS
3d3a153dd2f72f9c8b10de3877deb6be *vignettes/bibliography.bib
2a525a4d0bfde9865b47c532ce586782 *vignettes/biomed-central.csl
39c6c01e21107c7129c52e656e311636 *vignettes/error_dosages.RDS
f6621f2b39ab7790d86cd546bda38a81 *vignettes/figures/Noisy_IBD.png
070be1a00318238548191a5da1e8b0d7 *vignettes/figures/fish_hom1.png
20181da0be06e02ab648c71a6ed91139 *vignettes/figures/mr1.png
556f9fdee231756746a0b0856e5a858a *vignettes/figures/mr2.png
db299d22743d5c799a421db7fee78498 *vignettes/figures/qtl_effects.png
22b38c498a33df074c75acb21b798f0d *vignettes/figures/thinmap.png
43087327d009fe30774ef9d7cbff1c5a *vignettes/mr.RDS
7d8784282f4a16339bf7f1caf46a57c1 *vignettes/new_dosages.RDS
d579adf784ce973c204afd1d16f1e518 *vignettes/noisyIBD.RDS
f5a88c48a4fa6c608659613144677031 *vignettes/polyqtlR_vignette.rmd
37d8c47385c448df4d10a269421029c9 *vignettes/qtl_LODs.4x.RDS
6801943a5f61de3311dd0ea290d920d7 *vignettes/qtl_LODs.4x_cof_fastpermute.RDS
2efa676d135ed7bb03913991b6911b1c *vignettes/qtl_LODs.4x_cofactor.RDS
a1a7c27c3181de5109b5b12749ed9170 *vignettes/qtl_LODs.4x_fastpermute.RDS
7d195a9a21afdc337c810ffd696b74e4 *vignettes/qtl_LODs.4x_perm.RDS
8098d72f113d02f469b1e0c0174c9e7f *vignettes/qtl_SMR.4x.RDS
964a95e96fe5f91b420188d5b1809775 *vignettes/visHap1.RDS
ce46ceeded57487c1fefe1bd60e10c02 *vignettes/visHap2.RDS
