d9d07eb146e9531f556f7170b79f01f5 *DESCRIPTION
8ac27a707192463a036d87955d4d9c1f *NAMESPACE
39d9cfa7713a702e47dda3e9d52df770 *R/RcppExports.R
95a853dbffe911b6dd766c09b1621c1c *R/accessory_functions.R
3d00aa743a2ddf327dfeef5b25f8eaa8 *R/polyqtlR_functions.R
17aacf3f8c0880c7dc6993afc653b2f0 *R/roxygen_datasets.R
44de50d1e9703229de38471bf2c6d705 *R/sysdata.rda
0898a54715aeee9632cdfb92dcdfa49d *build/vignette.rds
aaebbfb12c4d92aedff03e4565d1d944 *data/BLUEs.pheno.rda
f333a9063ce690d28b862cd2910401ef *data/GIC_4x.rda
135203188becdcf4545d3a9aa4cabfa6 *data/IBD_4x.rda
66ab3b4e87140569e78ffc9e79f4715a *data/Phenotypes_4x.rda
d59cc1e74a229189c0fbec74d519797d *data/Rec_Data_4x.rda
5b7ace00d4ef59c66a95f4e0f8130aad *data/SNP_dosages.4x.rda
592b76233b83137e6aa774e11c717bf2 *data/mr.ls.rda
9094fb3060a916b5fbb32dbea622f437 *data/phased_maplist.4x.rda
442a5c48d4df6091b7f0a7b41b654979 *data/qtl_LODs.4x.rda
a84bcfe81f18788a89bce3796834b0df *data/segList_2x.rda
2d3e605652c71a4c9c0c3584a809561c *data/segList_3x.rda
97d214fbf78eb984c594c52a759a94ce *data/segList_4x.rda
38d45136574b3bbda0cc268ca0fb812c *data/segList_6x.rda
30036e45f6a1889350432b50fa6ffec7 *inst/doc/polyqtlR_vignette.R
6c7d5d1afbfd36c689297c5a821921fe *inst/doc/polyqtlR_vignette.html
9f740513e1eeb1116c77c2af52915333 *inst/doc/polyqtlR_vignette.rmd
ce2894923fdc4c1770c8426db98405b1 *man/BLUE.Rd
09720a5cd4e68a6bc53e8e6d8f4e3220 *man/BLUEs.pheno.Rd
101fd22eeeea25b9f8f0b32dbc484a30 *man/GIC_4x.Rd
bdd66978886d84be1f7c1776e4b0301f *man/IBD_4x.Rd
c412586b4ae61b5736b3674f780cdf79 *man/PVE.Rd
d9cf4ebff1e2bbc580d95401c7162b00 *man/Phenotypes_4x.Rd
fc3ae3679f3c05599aa3e2e6700ab9f5 *man/QTLscan.Rd
c1b68520b54d878d4f3a13e766b91bd7 *man/Rec_Data_4x.Rd
0ab119459160fb7afb92615aad81ad47 *man/SNP_dosages.4x.Rd
1a1c46e289bd2d89c35feefb54bda36a *man/bx.Rd
bd552aaace04fd5b8a57c1b77112fd0d *man/check_cofactors.Rd
8239e8c45e54734c73f42f5a4bce6bf0 *man/convert_mappoly_to_phased.maplist.Rd
e7556bdb94f9079e0d8ee8adc2a0be49 *man/count_recombinations.Rd
dafbedf7132a7ac2c3ecba6e78466a54 *man/estimate_GIC.Rd
1730e4967166510ca1298bac9f955fdb *man/estimate_IBD.Rd
73b160e35cc2bb02d4c625a0dc030cb5 *man/exploreQTL.Rd
cfac8cdb62a0fa6d4b42e0e76e66d37f *man/findPeak.Rd
2a30bd07d8f62bab2540c6a472f3e638 *man/findSupport.Rd
986274a9778acdb1d696cc5dc5659263 *man/fx.Rd
73db86b359c99d666da378c5f9139c07 *man/hexa.list.Rd
f540f486c126a1381251775f4725acce *man/import_IBD.Rd
3ffe4520bb19e5529f2e759dd8e95a1a *man/impute_dosages.Rd
786b7dc1b9c9179ed54d475468c8462d *man/maxL_IBD.Rd
c99e8bb0d0c26572572a3205727d7001 *man/meiosis_report.Rd
084003d5f6513d9e984212f129895d32 *man/mr.ls.Rd
6a94c340e6233db144c513a4f71a2e17 *man/phased_maplist.4x.Rd
9c7853c71fe9fa77fe566552d027c160 *man/plotLinearQTL.Rd
2a5d1f8c9818210be22e372ca7668ee2 *man/plotLinearQTL_list.Rd
b0a8b72747f5d731d91ccf213c68c370 *man/plotQTL.Rd
13d8af6f755d8d9801922243d8cb0e47 *man/plotRecLS.Rd
e34957203abd2ac56ef187ec257510f2 *man/polyqtlR.Rd
fb42aa5f14a1b706262ffbad2faa876c *man/qtl_LODs.4x.Rd
58f942e6a4a576bd8131c0432aa815f0 *man/rem.hex.Rd
fb95a33620574621ffa8a51f4669ddbf *man/rem.quad.Rd
707ee4870d6dab671612697ee408aa55 *man/segList_2x.Rd
030195bd30609eb8059cd63fced128da *man/segList_3x.Rd
66e6044622a12319dc4223b10832a1d4 *man/segList_4x.Rd
528cd219e172b2f6cd1fbc01286fe640 *man/segList_6x.Rd
82850b422086c934d3c63cc27a21c6fa *man/segMaker.Rd
4125daf4d891ebada19f21b9eb77cb41 *man/singleMarkerRegression.Rd
2cb0b821df44d3016e8313147be1054a *man/spline_IBD.Rd
b393c39f7ccb89f13cb32f0285b09c2e *man/thinmap.Rd
8c526586fd43bd2e7b30d2dc0a78e3bf *man/visualiseGIC.Rd
784a55aa3eb35e189f77047b652c5b51 *man/visualiseHaplo.Rd
f6a0d77f15589e74b2d9fb20bd507fd8 *man/visualisePairing.Rd
35dfc326ea68e53ea401935b6d22feab *man/visualiseQTLeffects.Rd
e0fed6d91aeab5fb1e8ce4c3bd2328a2 *src/Makevars.win
a523e0fd996da12a1784110eaa7c0a25 *src/RcppExports.cpp
eeec9a2475064178dbe9f791320b3b74 *src/forwardbackward.cpp
90d8e6a03693d8a11988271cd217bc6f *vignettes/IBD_4x_DR.RDS
dd1457b0770006cd220af72334f58c9f *vignettes/QTLmodel.RDS
bcb789590cbb904e5e59c6849c4519c8 *vignettes/bibliography.bib
2a525a4d0bfde9865b47c532ce586782 *vignettes/biomed-central.csl
39c6c01e21107c7129c52e656e311636 *vignettes/error_dosages.RDS
f6621f2b39ab7790d86cd546bda38a81 *vignettes/figures/Noisy_IBD.png
070be1a00318238548191a5da1e8b0d7 *vignettes/figures/fish_hom1.png
20181da0be06e02ab648c71a6ed91139 *vignettes/figures/mr1.png
556f9fdee231756746a0b0856e5a858a *vignettes/figures/mr2.png
db299d22743d5c799a421db7fee78498 *vignettes/figures/qtl_effects.png
43087327d009fe30774ef9d7cbff1c5a *vignettes/mr.RDS
7d8784282f4a16339bf7f1caf46a57c1 *vignettes/new_dosages.RDS
d579adf784ce973c204afd1d16f1e518 *vignettes/noisyIBD.RDS
9f740513e1eeb1116c77c2af52915333 *vignettes/polyqtlR_vignette.rmd
37d8c47385c448df4d10a269421029c9 *vignettes/qtl_LODs.4x.RDS
6801943a5f61de3311dd0ea290d920d7 *vignettes/qtl_LODs.4x_cof_fastpermute.RDS
2efa676d135ed7bb03913991b6911b1c *vignettes/qtl_LODs.4x_cofactor.RDS
a1a7c27c3181de5109b5b12749ed9170 *vignettes/qtl_LODs.4x_fastpermute.RDS
7d195a9a21afdc337c810ffd696b74e4 *vignettes/qtl_LODs.4x_perm.RDS
8098d72f113d02f469b1e0c0174c9e7f *vignettes/qtl_SMR.4x.RDS
964a95e96fe5f91b420188d5b1809775 *vignettes/visHap1.RDS
ce46ceeded57487c1fefe1bd60e10c02 *vignettes/visHap2.RDS
