Type: Package
Package: bonsaiforest
Title: Shrinkage Based Forest Plots
Version: 0.1.0
Date: 2024-06-12
Authors@R: c(
    person("Mar", "Vazquez Rabunal", , "mar.vazquez_rabunal@roche.com", role = "aut"),
    person("Daniel", "Sabanés Bové", , "daniel.sabanes_bove@roche.com", role = "aut"),
    person("Marcel", "Wolbers", , "marcel.wolbers@roche.com", role = "aut"),
    person("Isaac", "Gravestock", , "isaac.gravestock@roche.com", role = "cre"),
    person("F. Hoffmann-La Roche AG", role = c("cph", "fnd"))
  )
Description: Subgroup analyses are routinely performed in clinical trial
    analyses. From a methodological perspective, two key issues of
    subgroup analyses are multiplicity (even if only predefined subgroups
    are investigated) and the low sample sizes of subgroups which lead to
    highly variable estimates, see e.g. Yusuf et al (1991)
    <doi:10.1001/jama.1991.03470010097038>.
    This package implements subgroup estimates
    based on Bayesian shrinkage priors, see Carvalho et al (2019)
    <https://proceedings.mlr.press/v5/carvalho09a.html>. In addition, estimates 
    based on penalized likelihood inference are available, based on Simon et al (2011) 
    <doi:10.18637/jss.v039.i05>. The corresponding shrinkage based forest plots
    address the aforementioned issues and can complement standard forest plots 
    in practical clinical trial analyses.
License: Apache License 2.0
URL: https://github.com/insightsengineering/bonsaiforest/
BugReports: https://github.com/insightsengineering/bonsaiforest/issues
Depends: R (>= 4.1)
Imports: brms, broom, checkmate, dplyr, forcats, gbm, ggplot2, glmnet,
        MASS, Rcpp, splines2, stats, survival, tibble, tidyr,
        tidyselect, vdiffr
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)
LinkingTo: Rcpp, RcppArmadillo
VignetteBuilder: knitr
biocViews:
Config/testthat/edition: 3
Encoding: UTF-8
Language: en-US
LazyData: true
LazyDataCompression: xz
RoxygenNote: 7.3.1
NeedsCompilation: yes
Packaged: 2024-06-14 18:46:45 UTC; sabanesd
Author: Mar Vazquez Rabunal [aut],
  Daniel Sabanés Bové [aut],
  Marcel Wolbers [aut],
  Isaac Gravestock [cre],
  F. Hoffmann-La Roche AG [cph, fnd]
Maintainer: Isaac Gravestock <isaac.gravestock@roche.com>
Repository: CRAN
Date/Publication: 2024-06-17 16:00:02 UTC
