%%%%% SIMULATION PARAMETERS %%%%%%%%%%%%
Run_Number=1
Random_Seeds=86145630
Data_File_Name=LRT_1pop_0.1_4_ISM+SMM

%%%%% MARKERS PARAMETERS %%%%%%%%%%%%%%%
Locus_Number = 5 5
Mutation_Rate = 0.000025 0.001
Mutation_Model = ISM SMM

Min_Allele_Number=1		
Variable_Mutation_Rate=false	
Allelic_Lower_Bound=1 		
Allelic_Upper_Bound=200	 	
Allelic_State_MRCA=100		
SMM_Probability_In_TPM=0.8	
Geometric_Variance_In_TPM=10	
Geometric_Variance_In_GSM=0.36

%%%%%% OUTPUT FILE FORMAT OPTIONS %%%%%%%
Genepop=T
Migrate=F
Migrate_Letter=F
Nexus_file_format = Haplotypes_only

%%%%%%%%DEMOGRAPHIC OPTIONS%%%%%%%%%%%%%
%%LATTICE
Lattice_SizeX=1
Lattice_SizeY=1
Ind_Per_Pop=2000

%%SAMPLE
Sample_SizeX=1
Sample_SizeY=1
Min_Sample_CoordinateX=1
Min_Sample_CoordinateY=1
Ind_Per_Pop_Sampled=100

%%DISPERSAL
Total_Emigration_Rate=0

%%%%%% EndOfSettings %%%%%%%%


