b2d374c347683ca61ca27b4f7e88fbdd *DESCRIPTION
73356289378fcdaa821fee32031e7a8a *NAMESPACE
c411bc88d55a44ca50b7e070377ab915 *R/EXhaps.R
ef35ff8dcc7490729c3977a341898266 *R/EXmuts.R
04a197994591eb139fae7512f5caca1f *R/SlimFunctions.R
5fa899a7c63716208c660d900d534a1c *R/check_functions.R
487a7e06fcb1ae15df77f31aeec8fce8 *R/choose_gameteFunctions.R
290c49141f6cfa03d17c4c9bfa61541f *R/combine_exons.R
248bb6e70a246c337ed8da12d323b26c *R/hg_apopPath.R
a967ac711c3ed4161c17a7da990d62e9 *R/hg_exons.R
e6e09cbb4fe1e9fada2c31a86d9f3e5d *R/identifyPathwaySNVs.R
682b44e408c1ffd6f2b38db81f2446ba *R/marker_map_functions.R
004d87169bb1616984e1cbe4bd30c246 *R/sim_StudySeqFunctions.R
20668ef6f294ff0b67d172776f3c8a8a *R/sim_gameteFunctions.R
83490bc19b610ec5048a5c5b152daf6b *R/sim_seqFunctions.R
741f651922b81c9f7a0d954e4860a22b *R/study_peds.R
1366a2b5017144471604d0071b43be32 *R/study_seq_methods.R
03743d90290c2e0a1a39421a290ffd4f *R/utility_Functions.R
a31fadcf2573655dcb352b522de528c1 *build/vignette.rds
cfbdb39271704753bb3e3d9694ecfd73 *data/EXhaps.rdata
9b64e88002ead1722c9b6e4c9ba65ed0 *data/EXmuts.rdata
e85f48b243939270f4df91182543f956 *data/datalist
b1c0aa065a723d190e3432fcb1ffbe0e *data/hg_apopPath.rdata
09699a0440fb70eeb439e9e0e416b96b *data/hg_exons.rdata
a912c1c7e88cede8ae21a0526176cf2c *data/study_peds.rdata
9d049541a5dbb1bbabda9263e0b0a4e7 *inst/doc/SimRVSequences.R
eb48cf5cebfd0ced9dd253bc6935d7c6 *inst/doc/SimRVSequences.Rmd
b8286b01c294cb46578e7c2a5414c219 *inst/doc/SimRVSequences.html
7062b1170cd4d06b5a848be088f7c334 *man/EXhaps.Rd
ea8a0e98c85c1497a7eefd706f8e7b0b *man/EXmuts.Rd
94bd7f159f815cbdd02fab7c7c550321 *man/affected_allele_count.Rd
eba72525d6de4e21bbe9a0f897951c9b *man/affected_onlyPed.Rd
2f750b9f87881f58e04eadc82fb6a90b *man/assign_gen.Rd
27ba27f3510ba494fb25709f127ba31c *man/check_SNV_map.Rd
4f5a313bd82bee20f5cd2ce0e7501fd7 *man/check_ped.Rd
dcc91ea4a8c68c8a10c176c93c834118 *man/check_peds.Rd
997c3a5322dc675383d338c2d891abba *man/combine_exons.Rd
adc830150695cf981fe7ec769ebb301c *man/combine_exons_by_chrom.Rd
a343a6f98f5c473ef06d0878af06b732 *man/combine_identicalmutations.Rd
beaba1d9547f2b214162596749d09708 *man/condition_haplos_no_cSNV.Rd
0d4f9085fbc1300e0d8fc14b082ac1ba *man/convert_BP_to_cM.Rd
83c6d85157effb7c691db84c88becec2 *man/convert_CM_to_BP.Rd
3ebab2debdf4e8720b01479cc107502d *man/create_chrom_map.Rd
a48828615cbbef87e2cfc60e4ebaff1c *man/create_slimMap.Rd
592c0b92daf3e41bdf1e7308e7bf112a *man/extract_tempIDs.Rd
8925da510c76557676d97f8b8394a537 *man/famStudy.Rd
59e68f137273568a9060e07d42b929ce *man/get_parOffInfo.Rd
cdac3ed51861281f70dedb9d31db080f *man/hg_apopPath.Rd
823b8e23dac227fb91e3ac0c868038d8 *man/hg_exons.Rd
67e6b83bbb939147d49c04384eab81ee *man/identify_pathwayRVs_byChrom.Rd
1a59fc6c0a2e743de21faa2d5fc0bd08 *man/identify_pathwaySNVs.Rd
976d3555633fa0192ad4af24dd474426 *man/is.famStudy.Rd
012f0952b0cd2e6b6d2b6031d7c07cd6 *man/is_int.Rd
ac889177745ce05340fb22970b90de98 *man/is_odd.Rd
459f157b8f5d6471f0e095cbdf64f845 *man/reMap_mutations.Rd
be8b29ed65f0294b5125fc3acd117a3a *man/read_slim.Rd
1c478b38e3ab625edced4a405dcba6c3 *man/reconstruct_fromHaplotype.Rd
ec191c9dac7085ed2447683263dea4f8 *man/reduce_to_events.Rd
1105a32fa714354c54849808e87d4042 *man/remove_allWild.Rd
51eb4b0b213eed238ac3ce2219b63056 *man/sim_FGenos.Rd
aa79022df4d1246e03bf9a376363a579 *man/sim_RVstudy.Rd
0cf9ffeaab5e9fb867176d5ab479ef55 *man/sim_chiasmataPositions.Rd
bb8d6874db5fa0bcaa8687a19cca759d *man/sim_gameteFormation.Rd
137d0a15d678b393c7faac5ebae15764 *man/sim_gameteInheritance.Rd
dc594ce26d9a5b62066d4b6262b78baf *man/sim_haploidFormation.Rd
b5d0a5e9410b9b6e0e7667204d24cbef *man/sim_seq.Rd
51fa89d363ec3918a4a3a24246268af4 *man/study_peds.Rd
6eed4e5136ce96efa76954c4b075d68d *man/summary.famStudy.Rd
58b54f2053b26ebdf8ed1c649c44055a *tests/testthat.R
6373704a87cac766e312f48adbe83cce *tests/testthat/test_affected_onlyPed.R
7eb94607183d4dc26e83f06102f68140 *tests/testthat/test_combine_identicalmutations.R
7ed6835186715469d058cb85b94791c6 *tests/testthat/test_create_chrom_map.R
b7bab5ccf2be473665eec5f5f1d645ee *tests/testthat/test_ger_parOffInfo.R
0b899196d84514d68e751180a3a20b01 *tests/testthat/test_reMap_mutations.R
46ef806974de471e0ed268004cf3807d *tests/testthat/test_reconstruct_fromHaplotype.R
d7d922557a29b562fdef1eda85f4fff8 *tests/testthat/test_reduce_to_events.R
d83db3faafc7ee1adb670a2984062921 *tests/testthat/test_remove_allWild.R
9d9d707de8d5468cd1bc02dd2a583acb *tests/testthat/test_sim_RVstudy.R
e7cd933cb4c6e4542e430debc01afd07 *tests/testthat/test_sim_chiasmataPositions.R
2bd2992e905ae49c0184b2441e03fa2a *tests/testthat/test_sim_gameteFormation.R
bf0e3a2aae85fa26f259c6aebaccdc5a *tests/testthat/test_sim_gameteInheritance.R
a335e6d5e7b31cd1373203a9380127cb *tests/testthat/test_sim_haploidFormation.R
eb48cf5cebfd0ced9dd253bc6935d7c6 *vignettes/SimRVSequences.Rmd
b06a3017bdc1678bd93838cb8df4fbe0 *vignettes/flowchart.png
642c332573902b83e280f7f3ab3f7b3b *vignettes/singlechromgametes.png
